Xiphophorus hellerii (green swordtail): 116709537
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Entry
116709537 CDS
T07363
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04080
Neuroactive ligand-receptor interaction
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116709537
04082 Neuroactive ligand signaling
116709537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116709537
Ion channels [BR:
xhe04040
]
Ligand-gated channels
GABA-A
116709537
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
116709537
NCBI-ProteinID:
XP_032404035
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Position
19:complement(3571572..3596706)
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AA seq
477 aa
AA seq
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MQAETVLMLFCVWMAGSAAKMVQPRGHKLEPYKQTRSRRDTRMEGGGSQKSGSPIYKRSP
DLTKNPMTKSEQLLRIDDHDFTMRPAFGGPPIPVGVDVQVESIDTISEVDMDFTMTLYLR
HYWKDERLSFPSTNNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGN
VLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDDRISL
SQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWI
DRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAV
NYLSTVQERKERKLRERLPCTCGIGNPDEMMIDPQITGYGSMDVNTTGNYGIPENGGRQE
RILAQVALNDPQITGQVKASRSYVNIWIDTHAIDKYSRVVFPGAYILFNIIYWSIYS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggaaacggttctgatgcttttctgcgtctggatggcaggatcagcggcgaag
atggttcagccgagaggtcacaagctggagccctacaaacaaaccagatcacgaagagac
accagaatggagggaggaggcagtcagaagtctggaagtccaatttacaaacgaagccca
gacctgacgaaaaacccgatgactaaatctgagcagctgctgagaatagatgatcacgat
ttcaccatgaggccagcgtttggaggtcctccaatacctgtcggtgttgatgttcaggtg
gaaagtattgataccatctctgaggtggatatggacttcaccatgactttgtatctgcgt
cactactggaaagatgagcggctgtcgtttcccagcaccaacaaccagagcatgactttc
gacagtcgtctggtgaagaagatttgggttcccgacatgttttttgttcactcaaagcgc
tctttcatccacgacaccaccactgataatgtcatgttgagagtttaccctgacggcaac
gtgctctacagtctcagggtcacagtcactgccatgtgcaacatggacctgagccgcttc
cccctggacacccagacctgctcactggagattgagagctatgcgtacacagatgacgac
ctgatgctgtactggaagaaaggaaacgaatctctgaacacggatgacagaatatctctg
tcccagttcctgatccaaaagtttcacaccaccacaaagctggcgttttacagcagcaca
ggctggtacaaccgtttgtacatccacttcaccctgcggcgccacatcttctttttcctg
ctgcagacatacttccccgccacgctgatggtcatgctgtcctgggtgtccttctggatc
gatcgcagggccgtgcctgccagggtgccactaggtatcaccacagtgctgaccatgtcc
accatcatcaccggggtcaacgcctccatgcctcgcgtgtcctacatcaaggccgtggac
atttacctctgggtcagcttcgtctttgtcttcctctcggtgatcgagtacgcggctgtg
aattacctctcaactgtgcaggagaggaaagagaggaagctgagggagagactgccgtgc
acatgtggcattggcaaccccgacgagatgatgatcgacccacaaatcactggctacggc
tccatggatgtcaacaccacggggaattatggaatacctgagaacggcgggcggcaggag
cgaatcctggctcaagtggcgctgaacgaccctcagatcacgggtcaggtgaaggcctcc
cgaagctacgtcaacatctggatagacacccacgccatagacaaatactcccgggtcgtc
ttccccggcgcgtacatcctcttcaacatcatttactggtccatatactcgtaa
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