Xiphophorus hellerii (green swordtail): 116709543
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Entry
116709543 CDS
T07363
Symbol
tonsl
Name
(RefSeq) LOW QUALITY PROTEIN: tonsoku-like protein
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116709543 (tonsl)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116709543 (tonsl)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
116709543 (tonsl)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116709543 (tonsl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
TPR_12
Ank
Ank_4
Ank_5
TPR_2
TPR_1
Ank_3
LRR_6
TPR_7
LRR_4
TPR_8
TPR_10
RPN7
Ank_KRIT1
Alpha-E
TilS
TPR_NPHP3
ANAPC3
Par3_HAL_N_term
Motif
Other DBs
NCBI-GeneID:
116709543
NCBI-ProteinID:
XP_032404042
LinkDB
All DBs
Position
19:3600852..3620703
Genome browser
AA seq
1426 aa
AA seq
DB search
MSSSREIKQLQRAKSKAQANRNLKEEANICNQLGELLSRTGDYEGAIREHQQELALSEAL
NDVIGRAVANRKIGECYAETGKIEAALKHQRCHLDLARSVGDHAEEQRALATIGRTFLFR
YESDQSKSSLEHAEDAFRKSLAVVDERLGGTLPQREISEMKARLFLNLGLVCDHLGEPKR
CSEFIRRSVFIAEKSQLLEVLYRANFNLGNIYFRNGEPSSAVRCLEQAKECARKMKDKFS
ESECFHCVGKVQLSLGDFVAARRSLKKALLLGSQQLADKMAVKKAFKYADKGCRLEEELS
EDQGSRPSSHQAVELTEQLGDLCCKLGCYSKALDAYRAQLTAAEALGKPDRELAVIHVSL
AATHTDLRQHRQAVDHYRKELALRRGNAAEECSTWLNIAAAQEESGCSCEDVESSYSSAV
SCAEASGQARLQKRALRLWLASRRRRSAAGDDALEAQLQRLCAAESWDPEGSDGEEEEEE
EMENSEALDDSDVVLSDSDDDLDGYDKMVSGRRKTGRWNKRNEKGETSLHRASIDGDLRQ
VLYLVEQGHPVNPRDYCGWTPLHEACNHGHHDVVAMLLDRGANINDPGGPLCEGVTPLHD
ALTCGNFKVARLLVERGASVTIRNAKGETPMDTLRLWQRTYRRELDEETRQECLCTEKLL
RKAAAGGVPAAPAAAKPFDALQDSQLFDAENSEPLLATGGRSSTNQDRSSPRQRPSSGTS
KQHRARGTEGSVLYGTSSSSSDGSDSDSPVSPLHPVRPRHAIPAAPSQKENPSTQEPLRT
ESTRDPPPPCVFQRDEYHSAIRSLGSAKTLRQALSQPQVSSSPTVSSALVLEEEYLADDW
LEDDLGEMQPKKKRRLRMDFNESRREEAASSSVRSQNHLSSESSCRGAVSSSSSRGLSQR
KNGSLKPHQVKMTQMPGMVRLGTREVSRSNSPSVADDEDVRPEAPPLVTFQPPAPCSAAP
ITASLPPPIRMRVKVQEDVFLIPVPQSEADSCTVSWLCEQAAQRYYQKCGLLPRLSLQKE
GALLSPQDLLLDLLQTNEEVLAEVCSWDLPPLPDRYRKACQSLAVDEDRRVSRLCEVQDG
GQSVSLCGLSLAPASLSPLLRALKLQASLTELRLSGNRLHDNLLPELVATTITMPHLRVL
DVSANGITREGLEKVVEALKGQSHPAYAVNCFKKLDLSLNPLGDGVSESLSCLLSSCPLL
SRLSLQACRLTARFLQQHRLLLAAALTGLGHLKSVSLSHNALGSTGFELVLKTLPLQTLT
HLDLAAIRRGPADHLALEHLAKLLSQGECPLIHLSLAGNGLTDGSVAILARCLPSCPTLR
SLDLSGNPSVSWSGLHSILTSVREASRPLTLLNLQGRHQPVVMVSGPWSSEELDGLSELV
QDLRLCSQGLNKLDRDALRHSWGLQDGGCVNRNAQFLLSAAAAASS
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctctcgggaaattaaacagctgcagagagcaaaaagcaaagctcaggctaac
agaaacttgaaggaagaggctaacatctgcaaccagctcggagaattgctgtccaggact
ggtgactatgagggcgccattagggaacaccaacaggagctggcgctctctgaagcgctg
aatgacgtgattggacgggctgtagcaaaccgcaaaataggagagtgctacgctgagacg
gggaaaatcgaagccgctttaaagcaccaacgttgtcacctggacctggcccgctctgtc
ggagatcatgcagaggagcagagagcgctggccaccattggccgaaccttcctgttccgg
tatgaatccgaccaatcaaaaagcagcttagagcacgctgaggacgctttcaggaagagt
ttggctgttgtggatgaacgactaggcgggacgttgcctcagcgagaaatcagtgagatg
aaggctcgcctcttcctcaacttgggtctggtctgtgaccatctgggggagcccaaacgc
tgcagcgagttcatccggcggagcgttttcatcgcagagaagagccagctgctggaggtt
ctgtaccgggcgaacttcaacctgggcaacatctacttccgcaacggcgagccgtccagc
gccgtccgctgcctggagcaggccaaggagtgcgcccggaaaatgaaggacaagttcagc
gagagcgagtgcttccactgcgtcggcaaggttcagctttctctgggcgacttcgtggca
gcccgacgatctctgaagaaagccctgcttctcggctcgcagcagctggcggacaaaatg
gccgtgaagaaagctttcaaatatgctgataaggggtgcaggctggaggaggagctgtcg
gaggatcagggcagcagacccagctctcaccaggccgtggagctgaccgagcagctgggg
gatctgtgctgcaaactgggctgctacagcaaagctctggacgcctaccgggctcagctg
acagctgctgaagctttggggaagccggatcgagagctggccgtcatccacgtctccctg
gccgcgacccacaccgacctgaggcagcaccgccaggccgtggatcactacaggaaggag
ctggcgctgcgccgcggcaacgccgccgaggagtgcagcacttggctgaacatcgccgcc
gcccaggaggagagcggctgcagctgtgaggacgtggagagcagctacagctcggccgtt
agctgtgctgaggcgtctggccaggcccggctgcagaagcgggcgctgcggctctggctg
gcatcccggcggcggcgcagcgcggcgggcgatgatgcgttggaggcgcagctgcagcgg
ctctgcgccgcggagagctgggaccccgaggggagtgacggagaggaggaggaagaggag
gagatggagaacagcgaagctctggatgacagcgacgtggttctgtcagactcggacgac
gatctggacggttacgacaagatggtgtcaggaagaaggaagacaggaaggtggaacaag
aggaacgagaaaggagagacgtctctgcacagagcgagcatcgatggagacctgaggcag
gtgctctacctggtggagcagggtcacccggtgaatcccagggattactgcggctggacg
ccgctgcacgaggcctgcaaccacggtcaccatgacgtcgtagccatgcttctggaccgc
ggcgctaacatcaacgaccccggcggcccgctctgtgagggcgtgaccccgctgcacgac
gcactcacgtgtggaaatttcaaagtggctcggctgctggtggagcgaggcgcctccgtc
acgatccgaaacgcaaagggtgagactccgatggacactctgcgtctctggcagaggacg
tacaggagggagctggacgaggagaccaggcaggaatgtctctgcacggagaaactgctg
aggaaggcggccgcaggaggagttcctgctgctccggctgcagccaagccgtttgatgcc
ctgcaggacagccagctgtttgatgcagagaactcagagcccctcctggccaccggaggg
cgctcttcgacaaaccaggacagatccagccccaggcagcggccgagcagcggcacatcg
aagcaacacagagccagagggaccgagggctctgttttatacgggacgtccagcagcagc
tcagacggcagcgactccgacagcccagtcagtcctctccatcccgtccgtcccagacac
gccatcccagccgctccgagtcagaaggagaatccctcaacccaggagccgctcaggacc
gaaagcaccagagatccccctccgccgtgcgttttccaacgagacgagtaccacagcgcc
atccgcagcttgggcagcgccaaaactcttcgtcaggctctttcgcagccgcaggtctcc
agctcgccgactgtttcgtccgctctggttctggaggaggaatatctggcggacgactgg
ttggaggatgatctgggtgagatgcagccgaagaagaagagacggcttcgaatggatttt
aacgagtcgagacgggaggaagcggcttcgtcatcggttagaagtcagaatcatctgagc
tcagagtcgtcctgcagaggcgctgtatcgagctcgtccagcagggggctctctcagagg
aagaacggctcgctgaagcctcaccaggtcaagatgactcagatgccagggatggtgagg
ctgggcacacgagaggtcagcaggtcaaacagcccctcagttgcagacgacgaagacgtg
aggcccgaagctcctccactggtcacctttcagcctccagctccttgttctgctgctccc
ataacagcatcactgcctccaccaatcaggatgagggtcaaggtgcaagaagatgtcttc
ctcatcccagttccacagagcgaggcggactcctgcaccgtgtcgtggctttgtgagcag
gcggctcagcgctactaccagaaatgtggcctcctgccacgcctctcgctgcagaaggaa
ggagcgctgctctctccacaggacctgctgctggatctgctgcaaaccaacgaggaggtt
ttggctgaagtttgctcctgggatctccctcctcttcctgatcgctataggaaggcttgc
cagagtctggcagtggacgaggacagacgcgtctcccggctgtgcgaggtccaggacggc
ggccagtccgtgtcgctgtgcggcctcagtttggcccccgcctccctcagccctctgctg
cgcgccctcaagctccaggccagcctcaccgagctccgcctctctgggaaccgtctccat
gacaacctccttccggaactggtcgccacgacgatcaccatgccccacctccgggtgctg
gacgtttcggccaatggcataacgagggaggggctggagaaggttgtggaggcgctgaag
ggacagagtcaccctgcatacgcggtaaactgcttcaagaagctcgatctgagcctcaac
ccgctcggagacggtgtgtccgagtctctgtcctgcctgctgtccagctgtcctctgctg
tccaggttgtctctgcaggcctgtcggctcacggcccgcttccttcagcagcaccgcctg
ctgctggccgccgcgctgacgggactgggccacctgaaatcagtgtctctgtcccacaat
gcactgggctccactggctttgagctggttctgaagactctgcccctgcagacgctcact
catctggacctggccgccatccgcagggggccagctgatcacctggctctggaacacctg
gccaaactcctgtcccagggcgagtgtcctttgatccacctgagtctggcaggaaatgga
ctgacggacggcagcgtcgccatcttggccaggtgtctgccttcatgtccaaccctgagg
agtctggacctgtcaggaaacccgtccgtttcctggtcgggcctccacagcatcctgacg
tccgtccgagaggcttctcgacctctgacccttctcaacctgcaaggtagacatcagcct
gttgtcatggtttctggtccttggagcagcgaagagctggacggtttgtccgaactggtg
caggatctccggctttgctcccaaggattgaacaagctggacagagacgcgctgaggcac
agctggggactccaagatggaggctgtgtgaaccgaaacgcccagtttctgctttctgca
gcagcagcagcctcatcatga
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