Xiphophorus hellerii (green swordtail): 116709570
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Entry
116709570 CDS
T07363
Symbol
six1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116709570 (six1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
116709570 (six1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Rrn6_K-rich
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
116709570
NCBI-ProteinID:
XP_032404090
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All DBs
Position
19:6176346..6178690
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AA seq
284 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENSNAGGNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSALLLQGNMSH
PGASAYPMSGLGAPQPVHGMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatattaccgtccttcgggtttacgcaggagcaagtggcgtgcgtctgcgaggtg
ctgcagcaaggaggaaacctggagaggctcggccgcttcctgtggtctctgcccgcctgc
gatcacctccacaagaacgagagcgtcctgaaagccaaggcggtggtggcgtttcaccgc
gggaactttagagagctttacaaaatcctggagagccaccagttctctccgcacaaccac
ccgaagctgcagcagctctggctcaaggcgcactacgtggaggcggagaagctgcgcggc
cggccgctcggagccgtggggaagtaccgggtccggaggaaattcccgctgccgcgcacg
atctgggacggcgaggagaccagctactgcttcaaggagaagtccaggggagtcctgcgg
gagtggtacacgcacaacccgtacccgtccccgagggaaaagagggagctggcagaggcc
acgggactgaccaccacgcaggtcagcaactggttcaaaaacagacggcagagggacaga
gccgccgaggccaaggagagagagaacagcgagaatagcaacgcaggcggcaacaaacag
aaccagctgtcccctctggacggaggaaagtctctcatgtccagctcggaggacgagttt
tctccgccccagagccccgaccagaactctgcgcttttgctccagggcaacatgagccac
cccggggcctccgcttaccccatgtccgggctgggggccccacagccggtgcacggcatg
cacggacacccgcaccagctgcaggactccttgttgggacctctaacctccagtcttgtg
gatttgggctcttaa
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