Xiphophorus hellerii (green swordtail): 116709584
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Entry
116709584 CDS
T07363
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116709584 (msh4)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Meiosis-specific proteins
Others
116709584 (msh4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
STING_LBD
Motif
Other DBs
NCBI-GeneID:
116709584
NCBI-ProteinID:
XP_032404111
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Position
19:complement(13036945..13046506)
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AA seq
912 aa
AA seq
DB search
MYQSNTEEITGSETSDPGQTCGRSGLKEATPSGYASSCCPASLSSALPCRSSDVHTPSSS
HAPSQPGIASGQCQNGVRVGRPASSVLMSSSDTSSVRFPGGTPRLRRTPGSTGPTGTSVS
SVSTTSGASVIVAVVEGRGLARGEIGMASIDLKCPELVLSQFADTGTYAKVITRLHILMP
MEILMPDTANEKGKWTKLFKLITENFPGVNLTAIQRKYYNEKKGMEYIQQLCAPEFGTVL
MEVQAKYYCLATAAALLKYLEFIQSSFYAAKSLKVIFKGSEQTAMIDSASAANLELVVNS
RDNRSDYTLLGVLNHTKTPGGARRLRSNILEPLLDVDTITIRLDAIQELLQNEELFFGLK
NAIGHFLDIDRLLSVLVQIPKQETAQAAESKITHVIQLKHTLDLVPQLREVLKTCNAALL
KAYSATLEDNRFDIILEQIKTVVNYDTTYLKGSLNMRTQKCYAVRPNINAFLDIARRVYT
EIVDDIAGLVNNLGEKYGFLLRTSFSTTRGFFIQMKLDGVVLPEGKLPPEFIKVTKQKNS
YGFTTADLIKMNGRCDEALREIFHMSYVVICQLLTTIHEHIHCLYKLSDTVSMLDMLLSL
ANACTISDYVRPEFTDTLAIKQGRHPILERMARQQPVSNNTYISEGSNFVIVTGPNMSGK
STYLKQVALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMLEMKEVSYI
IHNASDRSLTIIDELGRGTSAEEGIGICHSVCEFLLGLKAFTLFATHFLELCQLASLYPN
VENQHMEVQHTRNRDSGAEQVVYTYLLSRGCAEERQYGLRAAEMTSLPPSIIQEAKLVAC
KVSQQLLAKHPIDPETQRQRAVYHLATRLLQTARNSRLDPESLRMYLKGLKKQYEAELQA
AAPARLSDTVEE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagagcaacacagaggagataaccggcagtgagacctcagaccctggacaaacc
tgtggcagaagtggcctgaaggaagctaccccctccggctacgcctcgtcctgttgtcct
gcatctctctcctccgctctgccttgccgaagttcagatgttcacactcccagttcaagt
catgctccatcacagccaggaattgcctcaggtcagtgccagaatggcgtcagggtggga
cgaccagcctcgtcggttcttatgtcttcctcagacacttcctctgttcgctttcctgga
ggaacaccaagactcaggaggacaccaggatctacaggaccgacaggaacaagtgtctcg
tctgtttccacaacttctggtgcctctgtgatagtagcggtagttgaagggcgaggtttg
gccagaggagagattggcatggccagtattgacttaaaatgtccagaactcgtactttct
cagtttgcagacacagggacgtatgccaaggtgataaccaggcttcacatcttgatgccg
atggaaatcctgatgccagatacagccaatgagaaggggaaatggacaaaactcttcaag
ctcatcacagagaattttccaggtgtaaatctcactgcaatccagagaaagtactataat
gagaagaaagggatggagtacatacagcagctctgtgctccagaatttggcactgttcta
atggaggtgcaagcaaagtattattgcctagcaacggcagctgctttgctgaaatacttg
gagttcattcagagctcgttttatgctgccaagtctctaaaagtgatctttaagggaagt
gaacagacggctatgatcgactcggcctctgcagctaacttggagttggtggttaatagc
agagacaacagaagtgactatactcttttaggagtactcaatcatacgaaaacacctggt
ggagcgagaaggctgcgctccaatattctggaacctcttcttgatgtggatactataacc
atacgcttggacgccattcaggagctgctgcaaaatgaggagctcttcttcggcctaaag
aatgcaataggtcatttcctggacattgaccggctgctctccgtactcgttcagattcca
aaacaggaaacggctcaagctgctgaatctaagattacgcatgtcatccagctgaaacac
acactggatctggtgccacagttaagggaggtgttaaagacatgcaatgcagctctgcta
aaggcatacagtgcaacgctggaggacaaccgatttgacataatccttgagcagatcaag
actgtggttaattatgacaccacatatttaaaaggaagcctgaacatgcggacccagaag
tgttacgcagtgcgacccaacatcaatgcgttcctcgacatcgcacgccgagtttacact
gaaattgtagacgacattgcaggtcttgtgaacaacttgggggagaaatacggctttctg
ttgcgcactagtttcagtacgacccggggattctttatccagatgaagctggatggagtg
gttttaccggagggcaaactacccccagagttcatcaaggtcaccaagcagaagaacagt
tatggctttaccactgcagacctgattaagatgaatggtcgctgtgatgaagcgctgagg
gagattttccacatgtcttatgtggttatatgccaacttcttacaaccatccatgagcac
atccactgcctgtacaaactttctgacactgtatccatgttggacatgttgctctcgctg
gccaatgcatgcacaatctcagactacgtgcgtccagagtttacagacaccttggccatc
aaacaaggtcgtcaccccatcttggagcgaatggcccgacagcagcctgtctcaaacaat
acctacatctccgagggcagcaactttgtcatcgtaacaggaccaaacatgagcggcaaa
tctacatacctcaaacaggtggcgctgtgtcagatcatggcccaaataggctcttttgtc
ccagctgagtatgcctctttccggatcgctgatcagattttcaccagaattggtgttgat
gatgattttgagaccaactcttctaccttcatgttggaaatgaaggaggtgtcttacata
atccacaatgcgagtgacaggtcattgaccattatagatgaattggggcgtggcactagt
gctgaagaaggcattggaatctgtcactcagtttgtgagttcctccttggcctaaaggcg
ttcactctgtttgcgacacactttctggagctctgtcagctggcgtctctctatcctaac
gtggaaaaccagcacatggaggttcagcacacacgcaacagagactctggtgctgagcaa
gtggtgtatacatatctgctgagtcgaggatgcgccgaagaaagacaatacggtttgaga
gcagctgagatgacctcacttcctccaagtataatccaagaggcgaagttggttgcctgt
aaagtcagccagcagcttctggccaaacatcccattgatccagaaacgcagagacagaga
gctgtgtaccacctggcaactcgcctcttgcagactgccagaaattcaagactggatccg
gagagcctgcgtatgtatctgaaaggactgaagaagcagtatgaggcggagctgcaggct
gcagctccagcaaggctcagtgacacagtggaggaatga
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