Xiphophorus hellerii (green swordtail): 116709590
Help
Entry
116709590 CDS
T07363
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03020
RNA polymerase
xhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116709590 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
116709590 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116709590 (polr2c)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116709590 (polr2c)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116709590 (polr2c)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116709590 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
116709590
NCBI-ProteinID:
XP_032404121
LinkDB
All DBs
Position
2:20734214..20738497
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPTVKITELTDENVKFVIENTDLAVANSLRRVFMSEVPTIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVYPRPEEWPKSEYSEIEEDEVQAPYDPNGKPERFYFNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagccgacggtaaaaataacagaattgacagacgaaaatgtcaaa
ttcgtcatcgaaaacacggatttggcggttgcaaactctctccgtcgtgtcttcatgtca
gaggttcccacaatagccatcgactggatccaaatcgatgctaattcatcagtgctgcac
gatgagttcatcgcgcacagagtcggtctcattcccctcaccagcgacgacatagtggat
aaaatgcagtattcaagggactgcacctgtgatgacttctgtcccgaatgctccgtggaa
ctgaccttggacgtccgctgcaccgaggaccaaacgcgtcacgtcacctctcgcgatctg
ctctccaacaaccccagagtgatccctgtcacttccagaagcagagacaatgacccgaac
gactacgtcgagcaggatgacatcttgctggtgaagctccgtaaaggtcaggagcttcgg
ctgagagcgtacgccaagaagggcttcggtaaagagcacgccaagtggaacccgacggcg
ggggtttcattcgagtatgacccggacaacgcactgaggcacacagtctatccacgaccc
gaggaatggccaaagagtgaatactcagagattgaggaagatgaagttcaggcgccctat
gaccctaacggaaagccagaaagattttatttcaacgtggagtcctgcggttcgctccgg
ccggagaccatcgtcatgtcggcgttggcggttctgaagaagaagctcagcgacctgcag
acccagctgagccatgagatccagagtgacgtcctcaccattaactga
DBGET
integrated database retrieval system
