Xiphophorus hellerii (green swordtail): 116709637
Help
Entry
116709637 CDS
T07363
Name
(RefSeq) protein jagged-2-like isoform X1
KO
K21635
jagged-2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116709637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
EGF_2
EGF_DL_JAG
DSL
EGF_Teneurin
JAG1
JAG1-like_EGF2
EGF_CA
MP_p6
DUF6377
DUF4381
DUF6479
Motif
Other DBs
NCBI-GeneID:
116709637
NCBI-ProteinID:
XP_032404172
LinkDB
All DBs
Position
19:complement(27796284..27877903)
Genome browser
AA seq
1259 aa
AA seq
DB search
MWNNPGKAHRFFILCFLLTVCTEVCQSSGYFELQLISVENPRGQLLNGDCCDSEGRQADG
NCGLDECDTYFRVCLKEYQQEVKIGGPCTYGSEITKVIGGNTFQFRGSQKGSHDTGKIVI
PFQFSWPQDYTLIVEAWDKDNSTHGSDDELLIERSIYKGKINPGEGKQSVEHKSFIATIK
YTMRVRCDEHYYGMRCNNVCRPRDDYFGHYVCDHFGKRHCIEGWEGEDCKTAICKQGCSS
LHGTCSTPGECKCNYGWDGPLCDRCLPYPGCVHGTCTEPWKCTCEKNWGGLLCDKDLNYC
GTNQPCKNGGTCMNTEPDEYNCACLDGYSGKNCEIAEHACLSNPCANGGTCHEVPSGFEC
HCPAGWSGPTCAEDTDECASAPCAHGGTCIDMENGYECLCPVQWTGKTCQIDVNECGGKP
CLNAYYCKNMIGGYHCACFPGWVGHNCHINMNSCHGQCQNGGTCKNTARGYQCVCLPGFV
GRHCEAQRNHCPSSPCRNGGRCHAHLEGFVCDCPPGFTGTTCEVQNDPCNPNPCQSKSQC
NSLAGDFYCSCPDDYEGKTCSELKDHCKTHQCEVIDSCTVAIATNDTQQQVWHISSNVCG
PHGRCISLPAGNFSCSCDPGFTGTYCHENINDCVSYPCKNGGTCIDGISSFECVCPGGWE
GDLCDVDVNECSSNPCQNGGQCVDLFHDFYCNCVDNWKGKNCHLRESQCDSNTCRNGGTC
YDRGDSFLCRCPSGWAGNTCNTAKNSTCDSDPCENGGTCVGGEPFTCICKAGWEGPTCAQ
NIDDCNPHPCYNGGICVDGVNWFRCECASGFAGPDCRISECMGTEGSWRLGSDINECQSS
PCAEGSTCIDEISAYRCVCPPGRAGPQCQQFMGLGKSCRHAGLQYPHSSHWEEDCNACQC
VNGEVHCSKVKCGRRPCVLPNAVLPSVTSHQPCPGGLECVKHPLLTCLSPPCHQWGVCST
PDPPTPTQHTQCEPHSGYLDNRCAHITLIFNRDKVPQGTAVENICSELRYLPVTRMLAVD
RELIILCDLSYYTRNAVEVAMSFEMDGQLKDSDCGYIQNAAAAITSALSKYHNSTILQAV
VEARVEMQAECRAEGYLVPVLGVVFSLLWVFCLVVCVWWTRKRKKERERAALSEDTTVNN
QLEPLRSNTPKDNRDKDIQYECKKLIGPSDRTCDEPEEEEQQLEEDEEMVLGLGDKCLSH
KCPIVGAQDRSTNIKAEVMCTTRSGPVKAPHRTAYSPKDNRCKNLNAAKFSEDITDLCV
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgtggaataacccggggaaagcgcatcgcttcttcatactgtgtttcctgctgactgta
tgcaccgaggtgtgtcagtcttcgggttactttgagctgcaactcatctcggtggaaaac
ccaagaggtcagctcctgaacggcgactgctgtgactcggagggccgccaggcagatgga
aactgcggcctggacgagtgtgatacttacttcagggtgtgcttaaaggaataccagcag
gaggtgaagattggcggaccatgcacctatgggtcagaaatcaccaaggtgattggtggg
aatactttccagttcagaggaagccagaaaggcagtcacgacactgggaagattgtcatt
cccttccagttctcatggccgcaagattacactttgatagtggaagcttgggataaggac
aacagcacacatggcagtgatgatgagctgctgattgagcggagcatctacaaggggaag
attaatcctggcgaggggaagcagtcagtagaacataaaagcttcatcgccacaattaaa
tataccatgcgtgtacgctgtgatgaacactactatggcatgagatgcaacaacgtatgt
cgtccccgggacgactattttggacattatgtgtgcgaccattttgggaagagacattgt
attgaaggctgggagggagaggattgcaaaacagccatctgtaaacagggatgtagctcg
ttacatgggacctgcagcacccctggggaatgcaagtgtaactatgggtgggatggccca
ttgtgtgacaggtgcctcccatacccgggatgtgttcacggtacttgtactgagccctgg
aagtgcacctgtgagaagaactggggtgggctgctctgtgataaagacctgaactactgt
gggaccaatcagccctgtaagaatggaggaacctgcatgaacacagagccagatgaatac
aactgtgcttgtcttgacggctactccggcaaaaactgtgagattgcggagcacgcttgc
ctctctaacccctgtgccaacggagggacttgtcatgaagtcccgtcaggctttgagtgt
cactgtcctgctggctggtctggaccaacctgtgctgaagacacagatgaatgtgcctcc
gccccctgtgctcatggagggacctgcatcgacatggagaacggctacgagtgcctctgc
cctgtgcagtggacaggaaagacctgccagattgacgttaacgagtgtgggggaaagcct
tgcctcaatgcttactattgcaaaaatatgattggtggatatcactgtgcctgctttcct
ggatgggtgggccacaactgtcacataaacatgaacagttgccatggacagtgtcagaat
ggaggtacctgtaagaacacagccagaggctaccagtgtgtttgcctgccaggttttgtg
ggtcggcactgtgaggctcagaggaaccattgccctagcagtccttgcagaaatggtggc
cgctgccacgcgcatctggaaggttttgtgtgtgactgcccaccagggttcactggaacc
acctgtgaggtccaaaatgatccttgtaatccaaatccttgccaaagtaagtctcagtgc
aacagcctagctggtgacttctactgcagctgccctgatgattatgagggcaaaacttgt
tctgagctcaaggaccactgcaagacccaccagtgtgaagtgattgacagctgcactgtt
gccattgcaaccaatgacactcaacaacaagtgtggcacatttcatcaaatgtgtgtggg
ccacacggccgttgcattagcctgcctgccgggaacttcagctgctcctgcgatccggga
ttcactggcacctactgccacgagaatatcaatgactgtgtatcatacccatgtaaaaat
ggaggcacctgcatagatgggatcagctcctttgagtgtgtctgtccaggcggctgggag
ggtgacctctgtgatgttgatgtgaatgagtgcagcagcaacccctgtcagaacggaggc
cagtgcgtggatctatttcatgatttctactgcaactgtgtagacaactggaaagggaaa
aactgtcacttacgtgagagccaatgtgactccaacacatgcaggaacggcgggacttgt
tatgaccgtggagactcgttcctgtgtcgctgcccatcagggtgggcaggaaacacctgc
aacacagctaagaacagcacttgtgattcggatccatgtgagaatggaggaacatgtgtt
ggaggagaacctttcacctgcatctgcaaggctggctgggaagggcccacttgtgcacaa
aatattgatgactgcaacccacatccttgctacaacggtggcatctgtgttgatggtgtg
aattggttccgctgcgagtgtgcgtcaggatttgctggaccagattgccgcatcagtgag
tgcatgggaaccgaagggagctggaggctggggtcagatataaatgagtgtcagtcgtct
ccctgtgctgaaggctctacatgcatagatgagatcagtgcctaccgttgtgtctgccct
cctggacgagctggacctcagtgtcagcagttcatgggacttggaaagtcatgccgccat
gctggcctgcagtatcctcacagcagtcactgggaggaggattgtaatgcctgtcagtgt
gtcaatggcgaagttcactgttccaaggtgaagtgcggccgtcgcccctgcgtcctccca
aatgctgttttgccttcagtcaccagccatcagccctgtcctggaggccttgagtgtgtg
aagcatccgctcctcacatgcctgtctccaccatgtcatcagtggggcgtgtgctcaaca
cctgaccctcccactcctacccagcatacccagtgtgagccccatagtggctacctggac
aacagatgtgctcacatcactctcatctttaacagggacaaagtgccacagggcactgct
gtagagaacatctgctctgagctgaggtacctccctgtgactcggatgctggctgtggac
cgagaactgatcatcctctgtgacttgtcctactatacaagaaatgctgtggaggttgcc
atgtcttttgaaatggatggacaattgaaggacagtgactgtggctatatccagaatgca
gcagctgccattactagtgcattgtccaaataccacaacagcaccatccttcaagctgta
gtggaggccagggtggagatgcaggctgaatgtcgagctgaaggttatttagtccctgtg
cttggagttgtcttcagcctcctttgggtcttctgccttgttgtctgtgtttggtggacc
cgtaaaagaaagaaagagcgagagagagccgccctgtccgaagacaccaccgttaacaac
cagctggagcccctacggagcaataccccaaaggacaaccgagacaaagacattcagtac
gaatgcaagaaattaataggcccctctgataggacgtgtgatgagcctgaggaggaggag
cagcagctggaggaagacgaggagatggtcttgggcttgggggacaagtgtttgtctcat
aagtgtcccatagtgggagctcaggacaggagcaccaacataaaggcagaggtgatgtgc
acgacacgcagcggcccagtgaaggcaccgcatcggacggcatacagccccaaagacaac
cgatgtaaaaacctgaatgcagccaagtttagcgaggacattacagacctctgtgtgtga
DBGET
integrated database retrieval system
