Xiphophorus hellerii (green swordtail): 116709638
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Entry
116709638 CDS
T07363
Symbol
npas3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116709638 (npas3)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116709638 (npas3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
116709638
NCBI-ProteinID:
XP_032404177
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Position
19:complement(27133904..27426620)
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AA seq
1061 aa
AA seq
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MIRIFPDFSVQVTASATGGVGSGGGGGGAGGMVTGPPVGRVPVPVPGATNGTPQGVQGIS
AYQQSDPYWERPSNAGSCSNARPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGKENF
EFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKA
IGTQRRRSPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVEL
TGSSVFDYVHPGDHVEMAEQLGMKLPPGRGMSLSQGVVSEDGASSASSSSHSETPEPVES
SSPSLLSPDNSLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRSVPNQ
IMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIVYCENRISDYMDLTPVDIVGKRCY
QFIHAEDVEGIRQSHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNSSEKNII
WVNYVLSNPEYKDTPIDIAQLPNLPEKASESSETSDSESESKENSDNENTKSEGKPGHQA
EHREDPEADSKRQQQPGQSHCSSEEMKNHDDGDSSSNPESQDSDDSLEPSDGEQEQEQEV
VRGEGGGLEGRLGRLAGLGALEGLNTISGLGSLGGLHIKVEHYGEGEEELHNSHISSSED
DEEEEEEDIDEVDDGVQKCDDASAGSKLQKRRKRRKVQKWDGTRSRRLRLSTSPPSPAAI
GDSTPQANPSGATSITSTPLLTSSDSPNSTGTTSSVLKIKTEMAEPINFDNDSSIWNYPP
NREISRNESPYSMTSKPPAAGSQETFPSPQGGSLQVAIPDSVLTPPGPEGAAGGVRKPPY
NGNSASSSSSTATSLAPPSNTSSADPLSPPLSASPRDKQQGTPTTSSNSSSSSSSNSSSS
SLLYSGDLEALQRLQAGNVVLPLVHRVTGTLSSTSTTTPRVYTTGTIRYAPADVTLAMAQ
GNLLPNAAMNFVESSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPAPTVGNGSLG
GQMSATANVFTTAEGLFSTLPFPVYSNGIHTTQTTLERKED
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgtccaggtgacggcctcggcgaccggaggagtc
gggtctggtggtggaggaggcggagccggagggatggtgactggaccccctgttggtcgg
gtgccggttccggtaccaggagccactaacgggaccccacagggtgtccagggaatttcc
gcataccagcaaagtgacccctactgggagcggccgtctaatgcaggcagctgctcgaac
gcccggcccaagacccttcacctggccggccagcagcatacctcctcaccatggctgcag
gctctccggaaggagaagtcaagggacgctgcaaggtcacggcgagggaaagagaacttt
gaattctatgaattagccaagatgctgccgctgcccggtgctatcaccagccagctggac
aaggcctccatcatccgcctcacaatcagctacctgaagatgagggactttgccaaccaa
ggggatccaccatggaacctgcggattgagggacccccgcccaacacctcagtgaaagct
atcggtactcagcggaggaggagtcccagtgccgttgcctctgagatcttcgaacctcac
ctgggtagccacatattgcagtcactggacggttttgtatttgcactaaacaaggaagga
cgtttcctctacatctctgagactgtttccatttacctgggattgtcacaggtggagcta
acgggaagcagtgtgtttgactacgtccaccctggtgaccacgtggagatggcagagcag
cttggcatgaagcttcctccggggagaggcatgtctctgtcccagggagtggtcagtgaa
gatggagcgtcctcagcgtcatcatcatcacactctgagacgcctgagccagtggagtcc
agcagtcccagcctcctgtctcctgataactctctggaacgatccttcttcatccggatg
aagtccactctaacaaagagaggcgtgcacatcaagtcctcaggatataaagtgatccac
atcacagggcgtctgcggatcaggatggctctgacgcacagccgctcggtgcctaatcag
ataatgggaatggtggtggtagctcacgcccttccaccgcccacaattaatgaagttcgc
atcgactgccaaatgtttgtcaccagagtcaacatggatctcaagatcgtctactgtgag
aacagaatcagtgattacatggacttgacccctgtggacattgtagggaagaggtgctac
cagttcattcatgcggaagacgtagaggggatcagacagagtcacctggacttgatgaat
aaaggtcagtgtgtgaccaagtattatcggtggatccagaagaacggtggttacatctgg
atccagtccagtgccaccattgctattaacgccaagaattccagtgagaagaacatcatt
tgggtcaactatgtcctcagtaatcctgagtataaagacacacccattgacattgcccag
ttgccaaatcttccagagaaagcctctgagtcctccgaaacctccgactctgagtctgag
tccaaagagaactcagacaatgaaaataccaagtctgagggaaagccaggccaccaagca
gaacacagagaggatccagaagcagacagcaaacgtcagcagcaaccaggccaatcacat
tgctcatccgaggaaatgaagaaccatgacgacggagacagttcaagtaaccctgaaagt
caggacagtgatgacagcctggagccttcagatggggagcaggaacaggagcaggaggtg
gtccgaggagaggggggaggactggaaggcaggttggggagattagctggactgggagcg
ctggagggactcaataccatcagtggactgggtagtttgggagggctccatattaaggta
gagcactatggagaaggagaggaagaactccacaactcacacatctcttcatcagaggat
gacgaagaagaggaagaagaggacattgatgaggtagatgatggagtacaaaaatgtgac
gatgccagtgctggcagcaagctccaaaaaaggcggaaaaggagaaaagttcaaaaatgg
gatggaacacgaagcagaaggcttcgtctttccacatctccccccagcccagcagcaata
ggcgactctacaccacaggccaatccctcaggggccacctccatcacttccacaccgctt
ctaacttcgtccgactccccaaacagcacaggaaccacatcctctgttcttaaaatcaag
acagagatggcagagcctataaactttgacaatgacagcagcatctggaactacccaccc
aacagagagatttccagaaatgagtctccatatagcatgacctccaagcctcctgctgca
gggagtcaggagacattcccttccccacagggtggctctctacaggtagccatccctgac
tcggtcctcacccctcctggacccgaaggggcagcaggtggggtgagaaagcctccatac
aacggaaactccgcctcgtcctcttcttccactgctacgagtttagctcctccttccaac
acttcctctgctgaccccctttcccctccgctctctgcatccccccgggacaagcaacaa
ggtactcctacaacatcctcaaactcttcctcatcctcctcttcaaattcaagctcttct
tcactgctgtattctggggatcttgaagcacttcagcgcttgcaggctggtaatgtggtc
cttccgctggttcaccgcgtcacgggaactctgtcttctaccagcaccacgacgcctcgt
gtctacaccaccggcaccataagatacgcgccagcagacgtcactttggccatggcacaa
gggaacctccttcccaatgctgccatgaactttgtggagagctcagggtttggtctggac
cctaagacgcctatggagatgctctatcatcatgttcacaggctaaacatgtccgctgca
gcagctgcaggcccttttgttggatccccagcacccacagttggcaatggcagcttggga
ggccagatgtcagcgacagccaacgttttcaccacagcggagggacttttctcaacgcta
ccgttccccgtgtacagcaatgggatccacactacgcagacaactttggaaagaaaggag
gattaa
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