Xiphophorus hellerii (green swordtail): 116709731
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Entry
116709731 CDS
T07363
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xhe04030
]
116709731
G protein-coupled receptors [BR:
xhe04030
]
Rhodopsin family
Vision
Opsin
116709731
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srsx
PspB
Motif
Other DBs
NCBI-GeneID:
116709731
NCBI-ProteinID:
XP_032404272
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Position
20:25178266..25180432
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AA seq
356 aa
AA seq
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MAEEWGKQVFAARRHEDTTRGSAFTYTNSNHTKDPFEGPNYHIAPRWVYNLSTFWMFIVV
ILSVFTNGLVLVATAKFKKLRHPLNWILVNLAIADLGETVFASTISVCNQFFGYFILGHP
MCVFEGYVVSTCGIAALWSLTIISWERWIVVCKPFGNVKFDAKWATAGIVFSWVWSAVWC
APPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSYMVVLMITCCIIPLAIIILCYLAVWL
AIHAVAMQQKESESTQKAEKEVSRMVVVMIIAYCVCWGPYTFFACFAAANPGYAFHPLAA
AMPAYFAKSATIYNPVIYVFMNRQFRTCIMQLFGKQVDDGSEVSTSKTEVSSVAPA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaatggggaaaacaggtgtttgctgccaggcggcacgaagatacaacaaga
ggctccgcattcacatacacaaacagtaatcataccaaagatccttttgaaggaccaaac
taccacatcgctcctcgatgggtttacaacctctccacgttctggatgtttattgtggtc
attttatcagtcttcaccaacggcctcgtcttggtggccacagcaaagttcaagaaactt
cgtcatcctctcaactggatcttggtcaaccttgccattgctgatcttggagagacagtc
tttgccagcactatcagtgtgtgcaaccagttctttggatatttcattctgggacacccg
atgtgtgtcttcgaaggctatgttgtctcaacttgtggaattgctgctctttggtccctg
actatcatctcttgggagagatggatagttgtgtgcaaaccctttggaaatgtcaagttc
gatgccaagtgggccacagctggaatagttttctcctgggtctggtctgcagtgtggtgt
gctcctcccatctttggatggagcaggtattggcctcatggactgaaaacgtcctgcggg
cctgatgtgttcagtggaagtgaagaccctggagtccagtcctacatggttgtcctcatg
attacatgctgcatcattcctctggctatcatcatcttgtgctacctggctgtgtggttg
gccatccatgctgttgctatgcagcagaaggaatctgagtcgacccagaaggctgagaaa
gaagtgtccaggatggttgtagtcatgatcatagcttactgtgtctgctggggaccctac
accttttttgcctgctttgccgcagccaaccccggatacgccttccatcctttggccgct
gccatgcctgcatactttgccaaaagcgccaccatctacaaccctgttatctacgtcttc
atgaaccgacagttccgcacatgcatcatgcagctctttggcaaacaggtggatgatggt
tctgaagtgtccacatccaagacagaagtctcctctgtggctcctgcataa
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