Xiphophorus hellerii (green swordtail): 116709746
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Entry
116709746 CDS
T07363
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116709746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116709746
03041 Spliceosome [BR:
xhe03041
]
116709746
03032 DNA replication proteins [BR:
xhe03032
]
116709746
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116709746
Spliceosome [BR:
xhe03041
]
Complex A
U1 snRNP components
Sm proteins
116709746
U2 snRNP components
116709746
Complex B
U1 snRNP components
116709746
U4/U6.U5 tri-snRNP components
116709746
Complex C
U2 snRNP components
116709746
DNA replication proteins [BR:
xhe03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116709746
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
DUF777
Motif
Other DBs
NCBI-GeneID:
116709746
NCBI-ProteinID:
XP_032404292
LinkDB
All DBs
Position
20:31973685..31976834
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHMKTKNRKPLGRVMLKGDNITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagaggacaaggacagaaggtccagaaggttatggtgcagcccattaacctc
attttcagatacctgcagaatcgttccagaatccaggtgtggctgtatgagcaggtcaac
atgcggatagagggatgcattattggctttgatgagtacatgaacctggttctggatgat
gctgaggaaatccacatgaagaccaagaacagaaagccactggggagggtcatgttgaaa
ggagacaacattacgctgctgcagagcgtgtccaactag
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