Xiphophorus hellerii (green swordtail): 116709751
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Entry
116709751 CDS
T07363
Name
(RefSeq) poly(rC)-binding protein 4-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116709751
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116709751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
116709751
NCBI-ProteinID:
XP_032404297
LinkDB
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Position
20:complement(3163062..3245778)
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AA seq
491 aa
AA seq
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MRFLAADSAHHAAAAWTMSCEQEFGDGAMAVTLTLRLLMHGKEVGSIIGKKGETVKRIRE
ESGARINISEGSCPERIITITGPTDCVFRAFTMITFKLEEDLAALVANGTVTSKPPVTLR
LVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTEREVTISGGQDAIIQCVKL
ICTVILESPPKGATIPYRPSPSPGTVLLAGNQVFEASDFGSHPLFSVAQGGLDLQQTYAV
QSHYGIPHSELVKLQQLSMQHQGLASISQAATVLSGAVEANSQTTSQELLIPNDLIGSII
GRQGTKINEIRQVSGAQIKIGSQIDSSSDRHVTITGTPIAINLAQYLITSCLETAKSTAQ
SSSMSSPVDLTMSFTQPAPPASASSSSPSPLAAMGAALPHAPILGAPYALPLSSLLGVKS
IPYLALSTPPASAAAAAAAAAIGAPVLPSSVQTAAVPVPAHAAAALASYTAKISSSANGM
KKPERQKFSPY
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcttagcggcagactccgcccaccacgccgccgccgcctggaccatgagctgt
gaacaggagtttggagacggggccatggcggtcacgctcacgcttcgcctcctcatgcac
ggaaaggaagttgggagtattattggaaagaaaggagaaaccgtgaagagaatacgagaa
gagagcggcgccaggatcaacatctctgagggttcctgtccggagaggatcatcaccatc
accggtccgacagactgcgtgttccgagctttcaccatgatcaccttcaaactggaggag
gacctggcggcgctggtagctaacggcacggtgaccagcaaacctccggtcacgctgcgg
ctcgtcatcccggccagccagtgcggctcgctcatcggcaaaggagggtcaaagatcaag
gagatcagagagacaacaggtgcgcaggttcaggtggccggcgaccttctccccaactcc
acggagagagaggtgacgatatccggagggcaggacgccatcatccagtgtgtgaagctg
atctgcacggtaatcctggagtctccaccgaaaggagcaaccattccataccggcctagt
ccaagtccaggaacggtgctgctggcaggaaaccaggtgttcgaggcctcggactttgga
tctcacccgctgttctccgtggctcagggcggattggacctgcagcagacgtacgcggtt
cagagccactacggcattccacattcagagttagtgaagctgcagcagctgtccatgcag
catcagggcctggcgtccatcagccaggcggccaccgtcctgtccggagcggtggaagcg
aattcccaaaccacgtctcaggagctcctcattccgaacgatctgattggatcaatcatc
ggtcgccagggaaccaaaataaacgaaatccggcaggtgtctggggctcagatcaagatc
ggcagtcagatcgacagcagcagcgaccgccatgtgaccatcaccggcacgccgatcgcc
atcaacctggctcagtatttaatcacctcatgtttagagaccgccaaatccaccgcccag
tcctcctccatgtcgtctcccgttgacctgaccatgagcttcacccagcccgcccccccc
gcctccgcctcgtcctcctccccttcccccctggcagcgatgggtgctgcactgccccac
gctccgatcctgggcgccccctacgcccttcccctctccagcctcctgggagtgaaatcc
atcccctacctggcactgtccacccctcccgcctccgcagcagcagcagcggcggcggcc
gccatcggtgcgccggtgcttccgagctcggtgcagacggcggcggttcccgtcccggct
cacgcggcggccgcgctggcgtcctacacggccaagatctcatcgtccgccaacgggatg
aagaagccggagagacagaagttttctccgtactga
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