Xiphophorus hellerii (green swordtail): 116709825
Help
Entry
116709825 CDS
T07363
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116709825
Spliceosome [BR:
xhe03041
]
Common components
Common spliceosomal components
General mRNP proteins
116709825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
116709825
NCBI-ProteinID:
XP_032404377
LinkDB
All DBs
Position
20:3823981..3831734
Genome browser
AA seq
502 aa
AA seq
DB search
MMADDLDIEAMLEAPFRKEDGKNQSPEGQEERSKRKKRSRSRDRKRSRSRDKKRSRSRER
KGSRSRDRRRSRSRERRRSRSRERGGRYKDHHKHRRRSRSKSPIRKEKSPARLPLDNLTP
EERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSV
PLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANSLQKGTFGPMRLYVGSLHFNITEEM
LRGIFEPFGRIENIQLMMDSETGRSKGFGFITFADAECAKKALEQLNGFELAGRPMKVGH
VTERTDAAAASSFLDNDELDRSGVDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAI
AIGALAAVSAAMNPPLTMNMSTPALNLPSQPLATHCFQLSNMFNPNSENVPGWELDIQHD
VIEECNKHGGVVHIYVDKNSAEGNVYVKCPSIPSAMAAVNALHGRYFGGKMITAAYVPLP
TYHNLFPESATATQLLVPPARR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggacgacctggacatcgaggcgatgctggaggctccattcaggaaggaggac
gggaagaaccagagccctgaaggacaggaggagcgcagcaagaggaagaagcgcagccgc
agcagagacaggaaacgcagccgcagtcgggataagaagaggagccgcagccgcgagcgc
aaaggcagccgcagccgcgaccgacgcaggagccgcagccgggagcgcagacgcagccgc
agccgggagcgggggggccgctacaaagaccaccacaagcaccgcagacggtcgaggagc
aagagtccaatcaggaaggagaaaagcccagccaggctgccgctggacaacctgactccg
gaggagcgggacgcccgcaccgtgttctgcatgcagctggcggcccggatacgaccccgc
gacctggaggagttcttctctgctgtggggaaggttcgggatgtgaggatgatctctgac
aggaactcacggaggtcaaagggcatcgcctacattgagtttgtggaggccagctcggtt
cctctggccatcggcctgacgggtcagaggctgctgggggttcccatcatcgtccaggcc
tcacaggcagagaagaaccgagctgctgccgctgctgcagccaatagccttcagaaggga
acgtttggcccgatgcggctctacgtcggctcgctgcacttcaacatcacagaggagatg
ctgagaggaatctttgagccatttggacggattgaaaacatccagctgatgatggacagc
gagacgggccgatctaaaggcttcggcttcatcacgtttgcagacgcggagtgcgccaag
aaggcactggagcagctgaacggcttcgagctggcgggccggcccatgaaggtgggtcac
gtgaccgagcgtaccgacgccgccgccgcttcctccttcctggacaacgatgagctggac
cggtctggcgtggacctgggaaccacggggcggctgcagctgatggcccggctggctgaa
ggtacgggcctgcagatccctcctgccgctcagcaggcactgcagatgagtggcgccatc
gccatcggcgcgctggcggccgtgtcagctgccatgaatccacctctgaccatgaacatg
agcactccggcgcttaacctgccgtctcagccactcgccactcactgtttccagctgtcc
aacatgttcaaccccaacagtgagaatgtgccgggctgggagctggacatccagcacgac
gtcatcgaggagtgcaacaaacacggaggagtcgtccacatctacgtcgacaagaactca
gccgaggggaacgtttatgtgaagtgcccgtccatcccgtctgccatggccgccgttaac
gctctgcacggcaggtactttggaggtaaaatgatcacagcggcgtacgtccccctgcct
acctaccacaacctgttcccagagtctgccactgccacgcagctgctggttccaccagcc
aggcggtga
DBGET
integrated database retrieval system
