Xiphophorus hellerii (green swordtail): 116709827
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Entry
116709827 CDS
T07363
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-2
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116709827
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116709827
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116709827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-CCCH_PARP12
MKRN1_C
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
116709827
NCBI-ProteinID:
XP_032404380
LinkDB
All DBs
Position
20:complement(3812493..3816541)
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AA seq
399 aa
AA seq
DB search
MSTKQVTCRYFLHGVCREGSNCLFSHDLNNSKPSTICKYYQRGTCAYGERCRYDHVKHSM
RGGGGGASADTAGAGRGVRGEGKKPLVLKDRALCGDRTFGGLSDGPTSAVPEAAAAPQSY
VEAIRTGLDGSAPEPEPHAVGGAYQLCPYAAAGHCFYGDSCPYLHGDLCEVCRLQVLHPH
DPEQRRAHEKVCLLAFEADMEKAFAAQLSQNKVCSICMEVVVQKAAPSERRFGILSSCCH
TFCLNCIRQWRGTSNFCNKIIKSCPECRIISEFVIPSVYWVEDQEEKDQLIELFKSGVSK
KACKYFDQGRGSCPFGGNCLYLHAYPDGTRPEPDRPRKQLGSEGNVRFMNRVRLWDFIEE
REQRAAPPLDDDITELRQLFMQMSGPGAEDAEGPPNPGE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaaacaggtgacctgcaggtatttcctccatggagtctgcagggagggcagc
aactgcctgttctctcatgacctgaacaacagcaaaccctccaccatctgcaagtactac
cagaggggaacctgcgcctacggagagcgttgcaggtatgatcacgtgaaacattcaatg
agaggaggagggggcggagcttcagcggacacagcaggtgcaggcagaggggtcagaggt
gaagggaagaagcctttggtcctgaaggacagagcactgtgcggcgaccggacctttggc
ggcctgtcagacggtccgacctcggctgtaccggaggcggcggccgctccgcagtcctat
gtggaagctatcagaaccgggctggacgggtcggctccagaaccagagcctcacgcggtg
ggcggagcctatcagctctgtccgtacgccgccgccggacactgtttctatggcgacagc
tgcccatatctccatggcgacctgtgtgaggtgtgtcggctgcaggtgctccacccccac
gacccggagcagaggagagctcatgagaaagtgtgcctgctggccttcgaggccgacatg
gagaaggcgttcgcagcccagctcagccagaacaaggtgtgctccatctgcatggaggtg
gtggtccagaaggcggcgccgtcggagcggcggttcggcatcctgtcctcctgctgccac
accttctgcctcaactgcatccgccagtggcgtggaaccagcaacttctgcaacaagatc
atcaagtcctgtccggagtgtcggatcatctcggagttcgtcatcccatccgtctattgg
gtcgaggaccaggaagagaaggatcagctgatcgagctcttcaagtcgggcgtgagtaag
aaggcctgtaaatacttcgaccagggccgcggctcctgtcccttcgggggaaactgcctg
tacctccacgcctacccggacggaacccgaccggaaccggatcgaccccggaagcagctg
ggctccgagggaaacgtccggttcatgaacagggtccggctttgggacttcatcgaggag
cgcgagcagcgcgccgcaccgccgctggatgatgacatcactgagctgcgccagctcttc
atgcagatgtcgggtccgggcgcagaggacgccgagggcccgcccaaccccggggagtag
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