KEGG   Xiphophorus hellerii (green swordtail): 116709899
Entry
116709899         CDS       T07363                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 57-like
  KO
K24729  cilia- and flagella-associated protein 57
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:xhe03037]
    116709899
Cilium and associated proteins [BR:xhe03037]
 Motile cilia and associated proteins
  Other motile cilia associated proteins
   116709899
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML WD40_CDC20-Fz WDR55 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_Vps41 WDR90_beta-prop_4th Hemagglutinin Beta-prop_TEP1_2nd
Other DBs
NCBI-GeneID: 116709899
NCBI-ProteinID: XP_032404507
LinkDB
Position
20:complement(30415889..30438069)
AA seq 1170 aa
MSTVFSRPHFIFGLRKGVKNNLCFVDEQTVVFPSGNSCVIHNTVQRWQRFIPGLEGSLGL
RALALSPNQRYLAVSEKAEKASVTVFDLHQEHGMKRNVLTAGDFLVQEFLSIAFSPDSKY
LIGQSGAPEWLLIFWSWEKNKLLATEKTTNSNNPISQISFSPHNNMQVCVSGNGIFKLFR
YSEGNLKQNSIAKVESINILCHTWLSEDRVIAGTDTGRLLVSQSGDVRREIKMCSEAPQG
QNERNLEVRRIKAGNVTEGVAKCGITAILSYSKGFVCSTGPGTVSLFEKIEDNVYRKSRE
IQILPAPASSDSAPAQCQEIDTMCMSPAEETLAVSTDRGQLYSINLSSAEMKREEQLHFD
FLSQPFHSASITGLSICIRKPFMATSSLDCSVRIWNYETKELELYKEFQEEAFSVALHPT
GLFVLVGFSDKLRLMNLFIDDIRTFKDFALPGCRECAFSHGGHMFAAVDRSVIHIYSFTS
FENILNLNGHFGKVRTVEWSFDDSRLVSCGADGAVYEWNTHTGKLECETVLKACSYSGAA
FSWDYKTVLAVGTDLILREIQDCQVLREVPADAVAHTALAVSQSGRVVFTGTAGGTVRAV
TYPLPDKKEWITQQAHCGPVTKMVITYDDQFLLTASEDGCLLISKIVDEKGRGLRSNRQI
VHTEEILVTKADLEERAHNMLELKMHLEELHMEKEYQLRLQEMNYKEELQQMSNKFTEEI
KSLKTTQQILSTEIEQCEQETQLNSAEVEVKHCKDLKDLDQFYTSKLTVEHEKYEDLLQK
HKEMQEEYETRLIHAQGDRTQNLAEVTQMYEAELQAKTQQMNKCQKEAELRIREYEETIR
QAAEQEQQKIHTMKDKYEKKLQSEKEAFTKLKGNSGTMTQKVHNLQKQIDDHFSDITSLK
KERHTLMGFIRTLETDICVLKKQVSKYKKICQEKDRVISSLHIINQDLQKLKIILEFKLK
DMRKQIRPQQVDINEKAERIQKLEEELMLITNSSTRLKVTISELRLRLRTKDKEIQKELQ
RVQDLTTLLERVRSDLQVCASLIQDPRKLKDNILMIYGRYASSTESAKRSSAVDDAQKGM
CSQCGQLEMTVSSLQKKLVRSAKEHEDVYTRMMKDNMALVTEINELRKALHAERSKEKDA
KLSKASYNSPGRIPLQKEGAEEEPXHGGIN
NT seq 3513 nt   +upstreamnt  +downstreamnt
atgtcgaccgtgttttctcggccccattttattttcggcctccggaaaggcgtgaagaac
aatttgtgttttgttgacgagcaaacggtggtgttccccagcgggaacagctgtgtgatc
cacaacaccgtccaaagatggcagcgcttcattccaggtttagagggaagccttggccta
cgcgctttggctctaagtccaaaccagcgctacttggcagtatcggagaaggctgagaag
gcctccgtcaccgtgtttgaccttcatcaggagcacggcatgaagagaaacgttctaact
gcaggagattttctagttcaagagttcttgtccatagctttctctcctgattccaagtac
cttatcggtcaaagcggagccccagagtggttgttgatcttctggagttgggagaaaaac
aaactcttggcaacagagaagacaaccaactctaataatcccatttcacagatcagcttc
agtcctcataacaacatgcaggtctgtgtgagtggcaacggcatattcaagctgtttcgg
tactcagaaggcaacctgaaacagaacagcatcgcaaaggtggagtcaatcaacatcctg
tgtcacacctggttgtcagaagaccgagtcatagcggggacagacacaggaaggctgctg
gtgtctcagtctggggacgtgaggagggagatcaagatgtgctctgaagctccgcagggc
cagaatgagaggaacctggaagtgagacgaatcaaagcggggaatgtgacggaaggcgtg
gccaagtgtggcatcactgccatcctgtcctactccaagggttttgtgtgctccaccggt
ccgggcacagtctctctgtttgaaaagatagaggacaacgtctatagaaaaagcagagag
atacagattctcccagctccagccagcagtgactcagctccagcccagtgtcaggagata
gacaccatgtgcatgagtcctgcagaggagacgctggctgtcagcacagaccgaggccaa
ctgtacagcattaatctttcatctgctgaaatgaagcgggaggaacaactacattttgac
tttttgtcccagcccttccactctgcctccattactggtttgtccatctgcatccgtaag
cccttcatggccaccagctctttagattgctccgtacggatctggaattacgagacgaaa
gagttggagttgtacaaagagttccaagaggaggcgttcagcgtggctcttcaccccacg
ggcctctttgtgctggtgggcttttcagacaaactccggctgatgaacctgtttatcgac
gacatccgtacctttaaagactttgcgctgcccggctgcagagagtgtgccttcagccac
ggtggccacatgtttgcggccgtcgacagaagcgttattcacatctactctttcacctcg
tttgagaacattctcaatctaaacggccactttgggaaggtgcggaccgttgagtggagc
ttcgacgacagccggttggtgtcttgtggggcagacggcgccgtgtacgagtggaacacc
cacaccgggaagctggagtgtgagactgtgctcaaggcctgcagctactccggcgcggct
ttctcctgggactacaagaccgtcctggctgtaggaacggacctcatcctgagggagata
caggactgccaggtgctgagggaggttcctgctgatgcggtggctcacaccgctcttgcc
gtgtctcagtccggtagggtcgtcttcaccggtaccgccggcggaaccgttagagccgtt
acataccccctacctgataagaaggagtggatcacacagcaggctcactgcggccccgtc
accaagatggtgataacctacgacgatcagttcctgctgacggcgtccgaagatggctgc
ctgttgatatccaaaatcgttgacgaaaagggtcgaggtctgaggagcaacaggcagatt
gtccacaccgaagagattcttgttaccaaggcggacctggaggaaagggctcacaacatg
ttggagctgaagatgcatctggaggagctgcacatggagaaagagtaccaactccgcctg
caagagatgaactacaaagaggagctccaacaaatgtcaaacaagttcacggaggaaatc
aagtctctgaaaacaacacagcagatcctgagcacggaaatagagcagtgtgaacaagag
acccagctgaattctgcagaagttgaagtgaaacactgcaaagacttgaaggatctagac
caattctacacctccaagctgactgtggagcacgaaaagtacgaagaccttctccagaag
cacaaagaaatgcaggaggagtacgagacgcggttgattcatgcacagggggaccggacc
cagaatctggccgaggtcacgcagatgtacgaggccgagctgcaagcgaagactcaacaa
atgaataagtgtcagaaggaggctgagctaaggatccgagagtatgaagaaaccataagg
caggcagcagagcaagagcagcagaagatccacaccatgaaagacaagtacgagaagaaa
ctccagtcagagaaagaggccttcaccaagctgaagggaaacagtggcactatgacacaa
aaggtccacaatctccagaagcagatcgatgaccacttcagtgacataacctccctgaag
aaggagcgccacactctgatggggttcatccgcactctggagaccgatatttgtgttctg
aagaaacaggtttccaaatataaaaagatctgccaggaaaaggacagagtcatatccagc
ctacatattataaaccaggatctgcagaagttgaagatcatcttggaattcaagctgaag
gacatgaggaagcagatcaggccacagcaggtcgacataaacgagaaagcagaaaggata
caaaagcttgaggaggagctcatgctgatcaccaacagcagcactcgtctgaaagtcacc
atatctgaactgaggctcagactgaggaccaaagacaaagaaatccaaaaggagttgcaa
agggtgcaggatttgactacgcttcttgagcgggtcaggtcagacctccaggtttgtgcc
tccctcatccaggatcccaggaagctgaaagacaacattttgatgatatacggccgatac
gcctcaagcacagagagtgcaaagaggagcagtgcagttgatgatgctcagaagggtatg
tgctcccaatgtggtcaactggagatgactgtaagcagtcttcagaagaagctggtcaga
tctgccaaagagcacgaggatgtctacaccaggatgatgaaggacaatatggctcttgtt
accgaaatcaacgagctacgcaaggcactgcatgccgagcggagcaaggagaaagacgca
aagctcagcaaggcctcctacaatagtccaggtcgcatcccacttcaaaaggaaggagct
gaagaggaaccttgacatggtggaatcaactga

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