Xiphophorus hellerii (green swordtail): 116709899
Help
Entry
116709899 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 57-like
KO
K24729
cilia- and flagella-associated protein 57
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116709899
Cilium and associated proteins [BR:
xhe03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
116709899
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
CFAP251_N
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_Vps41
WD40_Gbeta
Beta-prop_WDR41
WDR90_beta-prop_4th
SPC25_N
Hemagglutinin
Motif
Other DBs
NCBI-GeneID:
116709899
NCBI-ProteinID:
XP_032404507
LinkDB
All DBs
Position
20:complement(30415889..30438069)
Genome browser
AA seq
1170 aa
AA seq
DB search
MSTVFSRPHFIFGLRKGVKNNLCFVDEQTVVFPSGNSCVIHNTVQRWQRFIPGLEGSLGL
RALALSPNQRYLAVSEKAEKASVTVFDLHQEHGMKRNVLTAGDFLVQEFLSIAFSPDSKY
LIGQSGAPEWLLIFWSWEKNKLLATEKTTNSNNPISQISFSPHNNMQVCVSGNGIFKLFR
YSEGNLKQNSIAKVESINILCHTWLSEDRVIAGTDTGRLLVSQSGDVRREIKMCSEAPQG
QNERNLEVRRIKAGNVTEGVAKCGITAILSYSKGFVCSTGPGTVSLFEKIEDNVYRKSRE
IQILPAPASSDSAPAQCQEIDTMCMSPAEETLAVSTDRGQLYSINLSSAEMKREEQLHFD
FLSQPFHSASITGLSICIRKPFMATSSLDCSVRIWNYETKELELYKEFQEEAFSVALHPT
GLFVLVGFSDKLRLMNLFIDDIRTFKDFALPGCRECAFSHGGHMFAAVDRSVIHIYSFTS
FENILNLNGHFGKVRTVEWSFDDSRLVSCGADGAVYEWNTHTGKLECETVLKACSYSGAA
FSWDYKTVLAVGTDLILREIQDCQVLREVPADAVAHTALAVSQSGRVVFTGTAGGTVRAV
TYPLPDKKEWITQQAHCGPVTKMVITYDDQFLLTASEDGCLLISKIVDEKGRGLRSNRQI
VHTEEILVTKADLEERAHNMLELKMHLEELHMEKEYQLRLQEMNYKEELQQMSNKFTEEI
KSLKTTQQILSTEIEQCEQETQLNSAEVEVKHCKDLKDLDQFYTSKLTVEHEKYEDLLQK
HKEMQEEYETRLIHAQGDRTQNLAEVTQMYEAELQAKTQQMNKCQKEAELRIREYEETIR
QAAEQEQQKIHTMKDKYEKKLQSEKEAFTKLKGNSGTMTQKVHNLQKQIDDHFSDITSLK
KERHTLMGFIRTLETDICVLKKQVSKYKKICQEKDRVISSLHIINQDLQKLKIILEFKLK
DMRKQIRPQQVDINEKAERIQKLEEELMLITNSSTRLKVTISELRLRLRTKDKEIQKELQ
RVQDLTTLLERVRSDLQVCASLIQDPRKLKDNILMIYGRYASSTESAKRSSAVDDAQKGM
CSQCGQLEMTVSSLQKKLVRSAKEHEDVYTRMMKDNMALVTEINELRKALHAERSKEKDA
KLSKASYNSPGRIPLQKEGAEEEPXHGGIN
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgtgttttctcggccccattttattttcggcctccggaaaggcgtgaagaac
aatttgtgttttgttgacgagcaaacggtggtgttccccagcgggaacagctgtgtgatc
cacaacaccgtccaaagatggcagcgcttcattccaggtttagagggaagccttggccta
cgcgctttggctctaagtccaaaccagcgctacttggcagtatcggagaaggctgagaag
gcctccgtcaccgtgtttgaccttcatcaggagcacggcatgaagagaaacgttctaact
gcaggagattttctagttcaagagttcttgtccatagctttctctcctgattccaagtac
cttatcggtcaaagcggagccccagagtggttgttgatcttctggagttgggagaaaaac
aaactcttggcaacagagaagacaaccaactctaataatcccatttcacagatcagcttc
agtcctcataacaacatgcaggtctgtgtgagtggcaacggcatattcaagctgtttcgg
tactcagaaggcaacctgaaacagaacagcatcgcaaaggtggagtcaatcaacatcctg
tgtcacacctggttgtcagaagaccgagtcatagcggggacagacacaggaaggctgctg
gtgtctcagtctggggacgtgaggagggagatcaagatgtgctctgaagctccgcagggc
cagaatgagaggaacctggaagtgagacgaatcaaagcggggaatgtgacggaaggcgtg
gccaagtgtggcatcactgccatcctgtcctactccaagggttttgtgtgctccaccggt
ccgggcacagtctctctgtttgaaaagatagaggacaacgtctatagaaaaagcagagag
atacagattctcccagctccagccagcagtgactcagctccagcccagtgtcaggagata
gacaccatgtgcatgagtcctgcagaggagacgctggctgtcagcacagaccgaggccaa
ctgtacagcattaatctttcatctgctgaaatgaagcgggaggaacaactacattttgac
tttttgtcccagcccttccactctgcctccattactggtttgtccatctgcatccgtaag
cccttcatggccaccagctctttagattgctccgtacggatctggaattacgagacgaaa
gagttggagttgtacaaagagttccaagaggaggcgttcagcgtggctcttcaccccacg
ggcctctttgtgctggtgggcttttcagacaaactccggctgatgaacctgtttatcgac
gacatccgtacctttaaagactttgcgctgcccggctgcagagagtgtgccttcagccac
ggtggccacatgtttgcggccgtcgacagaagcgttattcacatctactctttcacctcg
tttgagaacattctcaatctaaacggccactttgggaaggtgcggaccgttgagtggagc
ttcgacgacagccggttggtgtcttgtggggcagacggcgccgtgtacgagtggaacacc
cacaccgggaagctggagtgtgagactgtgctcaaggcctgcagctactccggcgcggct
ttctcctgggactacaagaccgtcctggctgtaggaacggacctcatcctgagggagata
caggactgccaggtgctgagggaggttcctgctgatgcggtggctcacaccgctcttgcc
gtgtctcagtccggtagggtcgtcttcaccggtaccgccggcggaaccgttagagccgtt
acataccccctacctgataagaaggagtggatcacacagcaggctcactgcggccccgtc
accaagatggtgataacctacgacgatcagttcctgctgacggcgtccgaagatggctgc
ctgttgatatccaaaatcgttgacgaaaagggtcgaggtctgaggagcaacaggcagatt
gtccacaccgaagagattcttgttaccaaggcggacctggaggaaagggctcacaacatg
ttggagctgaagatgcatctggaggagctgcacatggagaaagagtaccaactccgcctg
caagagatgaactacaaagaggagctccaacaaatgtcaaacaagttcacggaggaaatc
aagtctctgaaaacaacacagcagatcctgagcacggaaatagagcagtgtgaacaagag
acccagctgaattctgcagaagttgaagtgaaacactgcaaagacttgaaggatctagac
caattctacacctccaagctgactgtggagcacgaaaagtacgaagaccttctccagaag
cacaaagaaatgcaggaggagtacgagacgcggttgattcatgcacagggggaccggacc
cagaatctggccgaggtcacgcagatgtacgaggccgagctgcaagcgaagactcaacaa
atgaataagtgtcagaaggaggctgagctaaggatccgagagtatgaagaaaccataagg
caggcagcagagcaagagcagcagaagatccacaccatgaaagacaagtacgagaagaaa
ctccagtcagagaaagaggccttcaccaagctgaagggaaacagtggcactatgacacaa
aaggtccacaatctccagaagcagatcgatgaccacttcagtgacataacctccctgaag
aaggagcgccacactctgatggggttcatccgcactctggagaccgatatttgtgttctg
aagaaacaggtttccaaatataaaaagatctgccaggaaaaggacagagtcatatccagc
ctacatattataaaccaggatctgcagaagttgaagatcatcttggaattcaagctgaag
gacatgaggaagcagatcaggccacagcaggtcgacataaacgagaaagcagaaaggata
caaaagcttgaggaggagctcatgctgatcaccaacagcagcactcgtctgaaagtcacc
atatctgaactgaggctcagactgaggaccaaagacaaagaaatccaaaaggagttgcaa
agggtgcaggatttgactacgcttcttgagcgggtcaggtcagacctccaggtttgtgcc
tccctcatccaggatcccaggaagctgaaagacaacattttgatgatatacggccgatac
gcctcaagcacagagagtgcaaagaggagcagtgcagttgatgatgctcagaagggtatg
tgctcccaatgtggtcaactggagatgactgtaagcagtcttcagaagaagctggtcaga
tctgccaaagagcacgaggatgtctacaccaggatgatgaaggacaatatggctcttgtt
accgaaatcaacgagctacgcaaggcactgcatgccgagcggagcaaggagaaagacgca
aagctcagcaaggcctcctacaatagtccaggtcgcatcccacttcaaaaggaaggagct
gaagaggaaccttgacatggtggaatcaactga
DBGET
integrated database retrieval system
