Xiphophorus hellerii (green swordtail): 116709939
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Entry
116709939 CDS
T07363
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00510
N-Glycan biosynthesis
xhe00513
Various types of N-glycan biosynthesis
xhe01100
Metabolic pathways
xhe04141
Protein processing in endoplasmic reticulum
Module
xhe_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
116709939
00513 Various types of N-glycan biosynthesis
116709939
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116709939
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_2nd
DUF5859
Motif
Other DBs
NCBI-GeneID:
116709939
NCBI-ProteinID:
XP_032404553
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Position
20:28477245..28490356
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AA seq
555 aa
AA seq
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MIRTMKHALRPSGGLANFGCVSAELFGVLLLSLALAGAQALTPSHHLSLSDVGRLQNLLN
QPYDDLESAYYSVVGLTKLGAAVPDPAEVCQFLKSQLDPGSVDSLFFAAETSKAISGCEI
PVSNETRDILLAAVSEDSSMSQIHRAVGALSSLGLPLASQEVVGALTARINKEDNVMAII
SALQAASRLSQQAELGGILEEIEDLTARLDDLGGVYLQFEEGLEATGLFVAAAYSLSDHV
DMEPPLKEDQVIQLVNSIFSKKSWDSLSEAFSVASAAAALSNNRFHVPVVVSAQGPATVS
HNQPTLQLLVTDVMSQPLASASVLVESAYALASKSTVLNQAPFTHNNGVFELNFMSSKPA
SGYYQFTIGVTGDSRLVANHIELKVKVSTEVAVTNMDLSVVDKDQSIGTKTTRVQYPSKA
KSSFTADSHQNFAMSFQLVDVNNEQELTPHQTFVRLHNQKTGQEVVFVAEPDSKNLYKFE
LDTAERKSEFDSMSGTYSLYLMVGDATLENPILWNVADVILKFAEEEAPVAVQPKTLYVP
KPEIQVCFLSVFVHP
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgattcggaccatgaagcacgcgctcaggccaagtggtgggcttgctaacttcggctgt
gtgtccgcggagctattcggggttctcctcctcagcctggctcttgctggagctcaggct
ctcacaccgtctcaccacctgtccctgtctgatgtgggccggctccagaatcttctgaac
caaccatacgacgacctggagtccgcatactactctgtggttgggctcaccaagctcgga
gcagctgttccagatcctgcagaagtttgccagttcctgaaatcccagctggatcccggt
agtgttgattctttgttctttgctgctgaaaccagtaaggccatttcaggatgtgagatc
cctgtttccaatgaaaccagggacatcctcctggcggcggtcagtgaggactcatccatg
tctcagatccaccgggcagtgggcgctctcagctccttggggctcccactcgcttcacag
gaagtggtcggcgccctcacggctcgtatcaacaaggaggacaacgtcatggccatcatc
tcggccctgcaagccgcatcccgcctgtcccaacaggcagaactgggaggaatcctggag
gagattgaggatctgacggctcgcctggacgacctgggaggcgtgtacctgcagtttgag
gaggggctggaggccaccggcctttttgtggcagcggcgtacagcctgtcggaccacgtg
gatatggagccgcctctcaaggaggaccaggtcatccagctggtcaactccatcttcagt
aagaagtcgtgggactctctgtctgaggcgttcagcgtggcgagcgctgctgccgccctg
tccaacaaccgcttccacgtccctgtggtggtcagcgctcagggcccggccaccgtgtcc
cacaaccagccgaccctgcagctcctggtcactgacgtcatgtcccagcctctggcctca
gccagcgttctggtggagtctgcatatgctttggcctccaagagcaccgttctcaaccag
gcaccgttcactcataacaatggcgtctttgaactgaatttcatgtccagcaagccggcc
agtggatattaccagttcactattggtgtgactggggacagccgactggtggccaatcac
attgagctgaaggtcaaagtttccactgaggtggctgttactaacatggacctctctgtg
gtggacaaggaccagagcatcggcacaaagaccaccagagtgcagtatccctccaaagcc
aagagctcctttacagcagacagccaccagaactttgccatgtccttccagctggttgac
gtcaacaatgagcaggagctcacccctcaccagacgtttgtccgactgcacaatcagaaa
accggccaggaggtcgtatttgttgccgaaccagacagcaagaacctctacaagttcgag
ttggacacggctgaacggaagtcagagttcgattctatgtctggtacctactctctctac
ctcatggttggagatgccaccctggagaatcccatcttgtggaacgtggctgacgtcatc
ctgaagtttgcagaagaagaagctccagttgctgttcagccaaagactctttatgtacca
aaaccagagattcaggtctgttttctttcagtgtttgtacatccttaa
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