KEGG   Xiphophorus hellerii (green swordtail): 116710022
Entry
116710022         CDS       T07363                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04137  Mitophagy - animal
xhe04140  Autophagy - animal
xhe04144  Endocytosis
xhe04145  Phagosome
xhe04148  Efferocytosis
xhe05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    116710022
   04145 Phagosome
    116710022
   04140 Autophagy - animal
    116710022
   04137 Mitophagy - animal
    116710022
   04148 Efferocytosis
    116710022
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116710022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xhe04131]
    116710022
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xhe04147]
    116710022
   04031 GTP-binding proteins [BR:xhe04031]
    116710022
Membrane trafficking [BR:xhe04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    116710022
Exosome [BR:xhe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116710022
  Exosomal proteins of other body fluids (saliva and urine)
   116710022
  Exosomal proteins of colorectal cancer cells
   116710022
  Exosomal proteins of bladder cancer cells
   116710022
GTP-binding proteins [BR:xhe04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    116710022
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW nSTAND3 PduV-EutP Septin AAA_7 NTPase_1 AAA_16 AAA_22 AAA_24 G-alpha AAA_5 ATPase_2 NACHT NB-ARC AAA_14 SRPRB FLYWCH_N ATP-synt_ab ABC_tran
Other DBs
NCBI-GeneID: 116710022
NCBI-ProteinID: XP_032404699
LinkDB
Position
20:complement(26767091..26774929)
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVPTKRAQIWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNERAKPSAETCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacatcaaggaagaaagttctactcaaagtcatcatccttggagactctggagttggg
aagacctcactaatgaaccagtatgtgaataagaagttcagcaaccagtacaaagccacg
attggcgccgatttcctgacgaaagaagtcatggtggatgacagacttgtcacaatgcag
atttgggacacagcaggtcaggagaggttccagtctttgggtgtagctttctaccgtgga
gcagactgctgtgtgctggtgttcgatgtgaccgcacccaacaccttcaagaccctagac
agctggagagacgagttcttgatccaggccagcccacgagacccagagaatttccctttt
gtggtgctgggcaacaagattgacctggagaacagacaggtaccaaccaaacgggcacag
atttggtgtcagagcaagaacaacatcccatattttgaaaccagcgccaaggaggcaatc
aacgtggagcaggctttccagactatcgcacgcaacgctcttaaacaggaaaccgaagtg
gagttgtacaacgagttccccgagccaataaagctggacaggaacgagcgagccaagcct
tcagcagagacctgcagctgctga

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