Xiphophorus hellerii (green swordtail): 116710047
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Entry
116710047 CDS
T07363
Name
(RefSeq) la-related protein 4-like isoform X1
KO
K18763
la-related protein 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116710047
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116710047
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
La
RRM_fung
Motif
Other DBs
NCBI-GeneID:
116710047
NCBI-ProteinID:
XP_032404729
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Position
20:19679722..19692405
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AA seq
734 aa
AA seq
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MQVTTKGTSLNPNAKVWQEIPAQQNDIPEVSEDSSWLHTNSSPPEMTDGLSDVLSLESKG
YAIDFLSSPDEYSTSEDVEHPDLGYLVFDAQGDSAVDTELSKEEVVIEESLRESLKKRLE
FCFSRENLSKDLYLISQMDSDQFIPIWTVACMEDIKALTTDMDLILEVLRASPLVQVDEA
GEKVRPNHSRCIIILREVPETTPVEEVEDLFKSENCPKVLGVEFAHNSNWYITFQSDMDA
LQAYRYLREEVKMFQGKPIMARIKAINTFFGKNGFHSMDSGVYQQHAQSQAQYVSPVYMQ
QVYSPQQEFPIYPVVSPTWNPSIVPHFETPLAPFPSAGFMNGYSNPGNYKPNSSSVHRPA
GRNRSHIKGHPRPGDAVSSNLAPGTMVDGISGPMSPQDIQALRTLSSFKSHPASSFHFKD
SSSLSSISNGDQSRSGRDRRNGHRGMRRKREDEQSMKPVPLMEVKAAPPNFDLAASSFPP
LPGSVVPVQGETVTEVRLSDVVRGLRLTSKAGNQENSLTQNSKDSESPASKQESTSLPAK
PAVVVEAQTATPPAPSACPIVTKGDKTEPAAVQRNLPPSTEPDSKTTPEHDPSTSSKSVS
AEQPSSSTSEQDLQEPRKLSYAEVCQRPARDPPLAETPSPPATSPDHPLKELKVNTVKDP
QLNSKKSPERVGDKPPRQPSRTFRGAAGHSRAKGSGMKIREHQRGLNAGKQFSPQRGPKR
SGKEQNIPPLQQNN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttaccaccaagggaactagtcttaaccccaatgccaaagtgtggcaagagatc
ccagcccaacaaaatgacatcccagaagtatccgaagattcttcttggctccacaccaac
tcttccccccctgagatgactgatggtttgtcagacgttctttctttggagagtaaagga
tacgctattgacttcctgagtagccccgatgagtactccacatccgaggatgtggagcat
ccagacctgggatatttggtctttgatgcacagggcgactctgccgtagacactgaactg
tctaaggaagaagtagtgattgaagagagtttacgggagtcattaaagaaaagactggag
ttctgcttttctagggagaacctctctaaggatctgtacctgatatcccagatggacagt
gatcagtttattcctatctggactgttgcctgtatggaggacatcaaagcgctcaccact
gacatggatctaatcctggaagtattgagagcgtctcctttagtgcaagttgatgaagct
ggtgagaaagttcgacctaaccacagccgctgcatcattattttaagagaagtgccagaa
actacaccagttgaggaagtagaggatctattcaagagtgaaaactgtccaaaggtgttg
ggtgttgagtttgctcacaatagcaactggtatataacatttcagtcagacatggatgcc
ctgcaggcatacagatacctacgagaggaagtgaaaatgttccaggggaaacccattatg
gctcgcattaaagccataaatacattctttggaaaaaatggctttcacagcatggactca
ggagtgtatcagcagcatgcccagtctcaggcccagtatgtgtctccggtgtacatgcag
caggtgtacagccctcagcaggagttccccatttatcctgtggtgtctcccacctggaac
ccttccatcgtgccacactttgaaacgccactggctcccttccccagtgcaggattcatg
aatggatacagcaatccagggaactacaaaccaaactccagcagcgtccaccgtcctgct
ggcaggaacaggagccacataaaaggtcaccctcgaccaggcgatgctgtttcttctaac
ttggctccaggaaccatggtggatggtatctctggccccatgagtccacaggacatccag
gcactaaggactctgtccagctttaaatcacatccagcctcttccttccactttaaagac
tcttcttcactgtcctccatatccaatggagatcagagccgctctgggcgagacaggaga
aatggccacagaggcatgaggaggaaaagagaagatgaacagtctatgaaacctgtccct
ttgatggaggtcaaggcagcccctcctaactttgatctggcagcttcaagttttcctcct
ttgccaggatctgtggttcctgttcagggggaaaccgtgacagaggtgcgcctctccgat
gttgtccgtggccttaggctcacaagcaaggcaggaaaccaggagaacagcttgactcaa
aactcaaaagactctgaaagtcctgcaagcaaacaggaatctacctccctgcctgctaaa
cccgctgttgttgttgaggcacaaacagcaactcctccagcaccaagtgcttgtccaata
gtaacaaaaggagataaaaccgaaccagctgctgtacagagaaacctgcctccatccact
gaacctgattctaaaaccactccagaacacgatcccagcacgagcagcaaaagtgtttct
gctgaacaaccttcatcttcaacatcagagcaagacctgcaggagccaagaaagcttagc
tatgcagaggtgtgccagaggccagccagagacccaccattagcagagacaccctcccct
cctgccacttcacccgaccaccctctaaaggagctcaaggtcaacaccgtcaaggaccct
cagctgaactctaaaaagagtcctgagagagttggagataaacctcctcggcagccttca
cgtacattcagaggtgcagctggtcactccagagcaaaaggttcagggatgaagattcgg
gaacatcagagaggcctgaatgctggaaagcagttttcccctcagcggggtcccaaacgc
agcggcaaagaacagaacatacccccgcttcagcagaataactga
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