Xiphophorus hellerii (green swordtail): 116710081
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Entry
116710081 CDS
T07363
Name
(RefSeq) protein polybromo-1-like
KO
K11757
protein polybromo-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116710081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116710081
03036 Chromosome and associated proteins [BR:
xhe03036
]
116710081
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116710081
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
116710081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116710081
NCBI-ProteinID:
XP_032404774
LinkDB
All DBs
Position
20:complement(15604051..15620390)
Genome browser
AA seq
1637 aa
AA seq
DB search
MSANSKRRRATSPCSSVSGGGDPEDASSTAGSGRKKRKISNVPPVDTIAVCHELFNAVKD
YKDDQGRQLCEVFLRVPKRRNQPDYYEVVSQPIDMTKIQYKLKSEEYNDVEQLTADFQLM
FNNARNFYKSDSEEYQTASKLWEVYLQTRNEFVQPGDGDEDDEEGDDMMANSGLSNEYET
SGSSLKEVLEQLLEAIVSHTDPSGHLVSELFQKLPSKVQYPDYYAIIKEPIDLRTIAQRI
QTGYYKSVHAMAKDIDLMTKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKSSI
RIRNRKSGQADRFSGVSVALHYGSESEDDPVLSGSVCYDEGESEAESQSSSMEMSNPIFQ
LYEAVRGARNSQGQVFSEPFQQLPSRREYPDYYQQIKQPISLQQIRAKMKNGEYDSVEQI
DADLNLMFENAKRYNMPNSSIYKRAFRLQQIMQAKKRELLRKDEEDGDSILSSDAGSVKR
KSHKKNIKKNRMKALYAAVSEAREAATSRRLCDLFMVKPSKKDYPDYYNVILEPMDLKTI
EHKIKNERYGNEEELIEDMKLMFRNARHYNEEGSQVYNDADVLEKILKDKRKELGPPPEE
EDVGSPKLKLRKSGISPKKSKYLTPLQQKLNELYDAVRNFTDRRGRRLSTIFLRLPSRSE
LPDYYATIKRPIDMERIRSHMLTGRYQDVEALFEDFALMFNNACIYNEPESLIYRDALVL
HRVLLETRKQQERGEDSGPPPVGPLVRELIRNLFVSVMGHQDEEGRCYSDSLAEIPAVDP
SAPERPMLNFDIIRNNVERGLYRRLDIFQEHVFEVLEKARRLNRTDSEVFEDAVELHQFF
IKIRDELCKNGEILLSIALNYTLKHLHNDVEQDKREKIPKEIEEDKQKTQEEEENKEAKK
AEDLQKEGWQSESESKIVYREECSFENTTYHVGEFVYVEPSEPNLKPHVVCIERLWEDET
GGKWLYGCWFYRPSETFHLATRKFLEKEVFKSDYYNKVSISKVLDKCMVIFVKDYFKMQP
EGFKPEDVYVCESRYAARTKSFKKIKVWAMPESSVKLVPREVPLPVVRVASMFAKPDLEK
MAMSYTGHGNFIEKEREDVPMEMSATEPSCQYYEQLRFNSLWFKVGDFVYIQSHGLSKPR
VARLEKLWVQNGTTFLFGPIFIHPEETEHEPTKMFYKREVFLSHREETLPMSCVMGKCMV
SSFKDYLSNRPTEFAEEDILLCESRYIETEKTMKKFKGLKRFSYTSKVVEDEVYYFRKLI
VPQKEASPFLDKKIDELEVKLEDADDDMDDMDEDEDAPTTPSMPQMQSSLTSDMDILSYT
PQATPKVKGLAKKEGAKRKINMSGYILFSSEVRAIIKARHPDYSFGELSRLVGTEWRNLE
ASKKAEYEERAARIVEQQERDRPFKQGSPRAGTPVGALMGVVPSPSTMGMINQSMTPVSG
MMGAYGPPYMPMQGPHEGLLSVAPMPPHPAGGPNLLPHHLLQGMPGYPSMPHQGMMGAGI
NGMAGSPGQSNFIQQPGMFSPGQHAPPPYPGQGQPSHLQPTTPMFVAPPPKTQRVLHSEA
YLKYIEGLNSESNTVSKWDQMLKAQRRDAHLTKEQESRLPAHWLKSKGAHTTMVDALWRL
RDLMLRDSLNICQAYNL
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaactctaagaggagaagagccacctctccctgcagcagtgtcagcggagga
ggagatcctgaggatgcgtcttcgacggctggaagcggcaggaagaaaaggaagatctcc
aatgttccccctgttgacacgatcgctgtgtgccatgagctgtttaatgctgttaaagac
tacaaggatgatcaagggaggcaactttgtgaagttttccttagggtaccaaagaggagg
aatcagcctgattactatgaagttgtctcccagccaattgatatgacgaaaatccagtac
aaactgaagtcagaagaatacaatgatgtggagcagcttactgcggattttcagctcatg
tttaataatgctagaaatttctacaagagtgacagtgaggagtatcaaacagcgagcaag
ctgtgggaagtgtatttgcaaacaaggaatgaatttgtgcagcctggagatggagatgag
gacgatgaagaaggtgacgacatgatggctaattcaggactgtcaaatgaatatgagaca
tcgggtagcagtctgaaagaagtcctggagcaactcttggaggccatagtgtcacacacc
gacccctcaggccacctcgtcagtgaactattccaaaaactgccttccaaagtgcaatac
ccagactactatgctattataaaagaaccaatcgatctcagaacgattgctcagagaata
cagactggatactataaaagtgttcatgctatggccaaggacattgacttgatgaccaaa
aatgccaaaacgtacaatgaaccaggatctcaggttttcaaggatgcaaacaccataaaa
aaagtcttcatccaacgcaagactgaactcgaacatgctgagcctactaaatctagcatt
cgtatcagaaaccgcaaatcaggacaagcggatcgcttttctggtgtcagcgttgctctt
cattatggttcagagagtgaggatgaccctgtgctttctggctccgtctgctatgatgag
ggcgagtcagaggcagagagccagagttcaagcatggagatgagcaatccaatcttccag
ctgtacgaagccgtgcggggggcccggaacagccagggccaggttttctccgaacctttc
cagcaactgccgtcccgcagggagtatcctgattactatcagcagataaaacagcccatc
tcgctgcagcaaataagggcaaagatgaagaatggcgagtatgacagcgtggaacagata
gatgccgacctcaatttgatgtttgagaacgcgaagcgctacaacatgcccaactctagc
atatacaaacgagccttcaggctgcagcagattatgcaggctaagaaaagggagcttctg
aggaaagatgaggaagatggagatagcattttgtcatctgatgcaggaagcgtcaagagg
aaaagccacaagaaaaatatcaaaaagaaccgaatgaaagcgttgtacgcagcagtgagt
gaagccagggaggcagctaccagcagacgtctgtgtgatcttttcatggtcaaaccatcc
aagaaagactaccctgactactataacgtcatcctcgaaccgatggacctgaaaaccatc
gagcacaagattaaaaatgaacgctacgggaacgaggaggagctcatagaggacatgaag
cttatgtttcgtaacgctcggcattataacgaggagggatctcaggtgtataatgatgca
gatgttttagagaagatactaaaagataagcggaaggagttggggccaccaccagaggag
gaggatgtgggatcacctaaattgaaattacgaaaaagtggcatttctccaaagaagtcc
aaatacctcacccctctccagcagaaattaaatgagctctacgatgccgtccgaaacttc
acagaccgccgaggtcgccgtttaagcacaatctttctccggctgccgtctcgctccgag
ctgcctgactactacgccacaattaaaagacccatcgatatggagcgcatcagaagccac
atgttaacaggccgctatcaggatgttgaagctctgttcgaggattttgctctcatgttc
aacaacgcttgcatctacaatgagccagagtcactgatctacagggacgctctggtgttg
cacagagtgctactggagacgcgaaagcagcaggagcgaggggaggactccggcccccct
cctgtgggacctctggtgcgagagctgatcaggaatctgtttgtgtcggtaatgggccac
caggatgaagagggccgatgttacagtgactctctggctgagattcctgctgtggatcca
agtgcccctgagaggccgatgcttaactttgacatcatcaggaataatgtggagcggggt
ctttaccggagactggacattttccaggagcatgtgtttgaggtgctggagaaggcaaga
aggctgaacaggactgactctgaggtgtttgaggatgctgttgagcttcatcaatttttt
ataaagatcagggatgagctgtgcaagaatggagagatcttactctctattgccctcaat
tacacgttaaagcacctgcacaacgacgtggagcaggataagagggagaaaatccctaaa
gagattgaggaagataagcaaaaaacacaggaagaggaggaaaacaaagaggcgaagaaa
gcagaagacttacagaaagagggatggcagtctgaatcagaatcaaagattgtttacagg
gaggaatgcagctttgagaacacaacttaccatgtgggcgagtttgtttatgtggagcca
tcagaaccaaacctgaagcctcatgttgtctgcatcgaacgtttgtgggaagatgaaacg
ggtggaaaatggctctacggctgctggttttatagacccagcgaaacttttcatttggcc
actcgcaagtttctggaaaaagaggtcttcaagagcgactactacaacaaggtttccatt
agtaaagttcttgacaaatgtatggtcatttttgtgaaggattatttcaagatgcagcct
gagggctttaaaccagaggatgtgtatgtgtgtgaatcacgttatgctgccagaaccaag
tccttcaagaagatcaaagtctgggccatgccggagagttctgtgaaactcgtaccccga
gaagttcctcttcctgttgtgcgtgtagcgtcaatgtttgccaaacccgacctggaaaaa
atggcaatgtcatacactggccatggcaattttattgaaaaggagagagaagacgtccct
atggagatgagtgcaactgaaccaagctgccagtactatgagcaattacgcttcaacagc
ttgtggtttaaagtgggagactttgtttacatccaatcacatggtctgtcaaaacctcgg
gttgccaggttagaaaagctgtgggtacagaatggaactacctttctctttggacccatt
tttattcatccagaggaaacggagcatgagcctacaaaaatgttctacaagagagaagtg
tttctgagtcaccgagaggagaccctgcccatgtcttgtgtcatgggtaaatgcatggtg
tcctcttttaaggactacctgtccaacagacccactgagtttgcagaggaagatatccta
ctgtgtgagagccgttacattgagacagagaagacaatgaaaaaatttaagggtttgaaa
cggttctcgtacacctccaaagtggtggaggatgaggtctattatttcaggaaactgata
gtgccgcaaaaggaagcttcacccttcttggacaaaaaaatagatgagcttgaggtgaaa
ctggaggatgcagatgacgacatggatgacatggatgaagatgaagacgctccaacaaca
ccctctatgcctcagatgcaatcctctcttacaagtgacatggacattttgtcctacaca
cctcaggcaactcctaaggtaaaagggttggcaaagaaggagggagccaagagaaagatc
aacatgagtggctacatcctgttcagcagtgaagtgcgagcaatcatcaaagctcgacac
cccgattattctttcggggagctgagtcgtcttgttggcacggagtggagaaaccttgaa
gcttctaagaaagctgaatatgaagagcgtgccgccaggatagtggagcaacaagaacgt
gacaggcccttcaagcaaggttcccctagagcaggtacccccgtaggggcactgatgggg
gtggtgccttcgcctagcactatgggaatgataaaccagtccatgacacctgtgtcaggc
atgatgggagcttacggtccaccatacatgcccatgcagggcccccacgagggtttgctg
agtgtggccccaatgccacctcaccctgcagggggtcctaacctgcttcctcaccatctc
ctccaaggcatgccagggtatccgagcatgccacatcagggtatgatgggagctggtatc
aatggcatggcaggaagtcctgggcaaagcaacttcattcaacagcctggcatgttcagt
ccaggacagcatgctcctccaccatatccaggacagggccagccgtctcacttgcagccg
actactccgatgtttgtggcaccaccaccaaaaacacagagggtgctccactcagaggcc
tacctgaagtatatagagggattaaattctgagtcaaacactgtcagcaagtgggaccaa
atgctgaaagctcaaagacgtgatgcccacctgaccaaagagcaggagagtcggcttcca
gcacactggctgaagagcaaaggagctcacacaaccatggtggacgcattgtggcgtttg
cgtgacctaatgttgagagattctctgaatatctgtcaggcgtacaacctgtaa
DBGET
integrated database retrieval system