Xiphophorus hellerii (green swordtail): 116710126
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Entry
116710126 CDS
T07363
Symbol
chl1
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116710126 (chl1)
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
L1 family
116710126 (chl1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_5
C2-set_2
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Ig_6
Zwei_Ig_N
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
116710126
NCBI-ProteinID:
XP_032404848
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All DBs
Position
20:complement(33454147..33546064)
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AA seq
1200 aa
AA seq
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MRSQRNSGLAGRLTLLVVTCLCAFHTTTAIDIPLEVLGHVNIEQLPTITDQAPSSLIAFP
FDESFPMTCEAKGNPEPKFQWEKNGEDFDPYLDPRLMKEENSGTFVIPNNGNLTEYQGTY
RCHASNKLGTAISKEIEFIVPNVPKFPKEKLDPVEVEEGQPFILKCDPPTGIPPLQIYWM
TINLQHIEQDERVSTGLNGDLYFSHAVEKDSRRDYCCFAAFHRIRTIVQKTAMSVNVKTR
GGDRSESANAILERKPSLLTPPGGSSEKQLVKGEDLELECIPEGIPTPQVEWIKIGDQLP
VKAKLENHRKLLIVPRAQQEDSGKYMCRARNPLGEVVHYFTVTVEGPPEWESEPQSQLSM
IGSHVHIKCSARGVPEPTITWRVNGQLLQDSPAANRKILGDTVFLQNAKASDSAVYQCEA
SNRHGTLLSNANIMIMNLQPMILTNNGEDYSAVEGKGVMMHCKVFSSPPSAITWSRDDSS
ESVAGPRFTFHDNGSLEIHSAEKGDAGQYTCLAKNTEGSSAIDAVLYIKDPTRIVVAPKD
LQILKGSAAQLSCLAEYDESFSNDFELLWEKDNTQIVLNYTENPRYIMEDGYLNISDVSH
GDQGVYICVAKTPLDRDTASAFLMVLDVPVAPENLVLSEHKSKSVKLEWIPGDDHNSSPT
EFIIEFEENKWEPGNWKELLRVPGNHNSAILRLHGHVEYRFRVYAISAIGAGLPSEPTER
YKTPPSAPDKNPENIKIEGHLPHEMNINWEPLLPIEHNGPGLEYKVSYRRQDGQEEWTEH
TVKRHSFVVRNTPTFVPYEVKIQARNNQGWGPEPRIVSGYSGEDFPSAAPDDVAVEVMNS
SAIRVTWTRVHKDSLHGHLGGYRINWWRLRSLVDSKKSHRDKHSLAFPGDRTHGTVPGLT
PFSEYSLIVMTFNGRGNGPGSHPVNFKTPEGVPEKNPVLRVTDVKRNSVSLAWAPPLEPN
GILTGYVLEYQLINDTEEVGPLQAVNISNPDTTKWILHELEPLSKYKLYLRSCTAVGCGP
VVSEESTTALETTSSLAPTVGIRKSLSTPTTPKSHVTKPTRPNIGLASVHGGISTQGWFI
GLMSAIALLTLIVLIACFVNRNKGGKYSVKEKEDLHPDVESQGINDDTFCEYSDNDEKPL
KGSQRSLSREIKAADSGDSLVDYGDEDVQFNEDGSFIGEYGSRKEKRASAEVKASTQTPA
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcacaacgaaactccggattggctggcaggctgacgctgctggtggtcacctgc
ctctgtgcctttcacacaaccacagccatcgatattcctcttgaggttttgggtcacgta
aacattgagcagctgcccaccatcacagatcaggctcccagctccctcatcgcctttcct
ttcgacgagagcttccccatgacatgcgaggccaaagggaatcccgaaccaaaattccag
tgggaaaaaaacggggaagattttgacccttatctagatcctcgactgatgaaagaggag
aattctgggacttttgtgatccccaacaacgggaacctcacagagtaccagggaacctac
cgctgtcacgcttcaaacaaactggggacggccatatccaaggagattgagttcatcgta
cccaatgttccaaaattccctaaagagaagctggaccctgtggaggtggaagagggccag
cctttcattctgaaatgtgacccccccaccggcatcccgcccctgcagatctactggatg
actatcaacctccagcacatcgagcaggacgaacgggtgtccaccggcctcaacggagac
ctctacttctcacacgccgtggagaaggacagccggagggactactgctgcttcgccgcc
ttccacaggatacgcaccatcgttcagaagaccgccatgtctgtcaacgtcaagacaaga
ggaggtgacaggtctgaaagtgccaatgcaatcctggagaggaaaccctcacttctgacg
ccccctggtggcagttcagagaaacagctggtcaaaggagaggacttggaattggagtgt
attccagaaggaattccaactccacaggtggagtggataaaaattggtgaccagcttcct
gttaaagcaaagctggagaatcacaggaagctgctgatcgttcccagagcccaacaggag
gacagcgggaagtacatgtgcagagcaaggaacccactgggagaagttgtccattacttc
acagtgacagttgaagggcctccagagtgggagtcggagccacagagccagctcagtatg
atcggctcccacgtccacatcaagtgctcggcccgcggcgtcccggagcccaccatcaca
tggagggtgaacggccagctgctgcaggactccccagcggccaacaggaagattctcggc
gataccgtcttcttacagaacgccaaagcctctgacagcgccgtctatcagtgtgaggcc
tccaacagacatgggacccttctgtccaacgccaacatcatgatcatgaatttgcagcct
atgattctgacaaataacggggaggattactctgcagtggagggaaagggagtgatgatg
cactgtaaggtcttcagttcccctccttcagcaatcacttggagcagggatgactcctct
gagtcggtggcagggccccggtttacgtttcatgacaacggttcgctggagatccactcg
gcagagaaaggcgatgcgggacagtacacctgtttggctaaaaacacggagggatcatcc
gccatcgacgctgtgctctacataaaagatcccaccagaatagtggtggccccaaaggac
ctgcagatcttaaaaggcagcgcagcccagctctcctgcctggcagagtacgacgagtcc
ttcagcaacgactttgagctcctgtgggagaaagataacacacagatagtgctcaactac
acagagaatcccagatacatcatggaggatggctatcttaacatcagcgacgttagccat
ggagatcagggtgtgtacatttgtgtggcgaagactccgctggacagagacacagcttcg
gccttcctcatggtgttagatgtccccgtcgctccagagaacttggttttatctgagcac
aagagtaaaagcgtaaagctggagtggatccccggggacgaccacaacagctcccctaca
gagttcatcatcgagtttgaggaaaacaagtgggagccaggaaactggaaggagctgctc
cgagtccctgggaaccacaactctgccatcctcaggctccatggtcacgttgagtatcgc
ttccgtgtttacgccatcagcgccatcggagcggggctgcctagcgaacccacggagaga
tacaagacccccccgtcagcccctgacaagaacccagaaaatatcaaaatcgaaggtcat
ttgccacatgaaatgaatatcaactgggagccgctgctgcccatcgagcacaacggcccc
ggcctggagtacaaggtgagctacaggcggcaggatgggcaggaggagtggacggagcac
accgtgaagaggcactcgtttgtggtgcggaacactcccaccttcgttccctacgaggtg
aagatccaggccaggaacaaccagggctgggggcccgagcccaggattgtgagcggatac
tcaggagaggactttccctctgctgcacctgacgacgtagctgtggaggtgatgaacagc
tcagcaatcagagtgacctggacacgcgtccacaaggacagtctccatggacatctggga
ggctacaggataaactggtggcgcctgcgcagcctggtggactccaagaaaagccacaga
gacaaacactctctggcgttccccggggatcggacccacggcaccgtgccaggcctgacg
cccttctctgagtacagtctcatcgtcatgaccttcaacgggagaggcaacggtccgggc
agccatccggtcaacttcaaaaccccagagggagtcccagagaaaaacccagttttgagg
gtcacggatgtaaagaggaactcagtgtctctggcctgggcccctcctttggagcccaat
gggattctaacaggatatgtactggagtaccagctcattaatgacacagaggaagttggg
cctctgcaggctgtgaacatcagcaaccctgacaccacgaagtggatcctgcatgaatta
gagcctctgagcaaatacaagttgtatcttcgctcctgcactgcggttggctgtgggccc
gttgtcagcgaggagagcaccaccgccctggaaacaacttcttctttggctcctactgtt
ggcatcagaaagtctctctcaactccgaccactccaaagtcacatgtgaccaaacccact
cgtcccaacataggcctggccagcgtccacggaggaatctccacccagggctggtttatc
ggcctcatgtctgccatcgctctgctcacactcatcgtgttgattgcttgctttgtcaac
agaaataaaggaggaaagtattccgtgaaagaaaaagaagaccttcatccagatgtggag
tcccagggcattaatgatgacacattctgtgaatacagcgacaacgacgagaagccactg
aagggcagccagcgctccctcagcagggagatcaaggcagcggacagcggggacagcctg
gtggactacggcgacgaggacgttcagttcaacgaagacggctcattcatcggcgagtac
gggagccgcaaagagaagagggcgtcggccgaggtcaaagcctccactcagaccccagcg
tga
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