Xiphophorus hellerii (green swordtail): 116710134
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Entry
116710134 CDS
T07363
Symbol
tbc1d15
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 15
KO
K20168
TBC1 domain family member 15
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116710134 (tbc1d15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116710134 (tbc1d15)
Membrane trafficking [BR:
xhe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116710134 (tbc1d15)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
116710134
NCBI-ProteinID:
XP_032404879
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Position
2:5345761..5360096
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AA seq
655 aa
AA seq
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MAELLKVIFEHEGIFLHPSPDEGSPDQDLLVSGSLRIIEKDAEILVEYRPLEDSWIPSNM
LCAGQDSSSVVEWGQSAGEKSQSRQLLETQQSYETEWDMVNAVSFKKKNYTNGERSLNHS
HERSRWAFSVNISDLKSITVKEEGWTFLILQLKDSSSSIPALHFHQGGSREFLDSLRRFA
LLTECPEDETRLLVSTPSKALSQSFENLLDDNNFGLVHKFKRDPYVTTLGSFSKVTNYIY
DALRGTEEQQQQRPPEEVADLLGEVIPGLEINQQEEPGFEVITRIDLGTRPQVSRAEPVS
ADEWSKHQDPEGRIENRPALRQRIFKGGLCHAMRREAWKFLLGYYPWTSTLEERKSLQKA
KTDEYFRMKLQWKSISEEQERRNSRLRDYKSLIEKDVNRTDRTNRFYEGLNNPGLTLLHD
ILMTYCMYDFDLGYVQGMSDLLSPILFVMENEVDAFWCFVSFMDQMHQNFEEQMQGMKTQ
LIQLSTLLRLLDLAFWNYLESQESGYLYFCFRWLLIRFKRELIFSDVLRLWEVMWTELPC
QNFHLLVCCAILDSEKQKIMEENYGFNEILKHINELSMKLNIEEILQKAEGIYLQIRSCK
DLPHSISSILGFDTQHRVSSQADSGSRPVQQQDACSNGHCRDNRPQNSCRGVFTS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgttaaaggtgatatttgaacacgaagggattttcctccatccgagccca
gatgaaggaagcccggatcaagatttgctggtttcaggatcccttcgtatcatagagaag
gatgcagagattctggtggaataccgccctctggaggacagctggatcccgtccaacatg
ctgtgcgctggacaggactccagctcagtggtggagtggggccagtctgccggagagaag
tcccagtcccggcagctgctggagacacagcagagctacgagaccgagtgggacatggtg
aacgccgtctccttcaagaagaagaactacaccaacggagagcgctctctgaatcacagc
catgagcggagtcgctgggcgttttctgtgaacatcagcgacctcaagtccatcacagtg
aaggaggaaggttggacctttctcatcctacagctgaaggactcctccagctccatcccg
gcgctgcacttccaccagggcggcagcagagagttcctggacagcctgcggaggttcgct
ctgctgacagagtgtcctgaggatgaaacgcgtctgttggtcagcactccaagcaaagct
ctgtcccagtcctttgagaacctgctggacgacaacaactttggacttgttcataagttt
aagcgtgacccttatgtgacgacgctgggcagcttctccaaagtcaccaactacatctac
gacgccctgcgggggacagaggagcagcagcagcagcgccccccggaggaagtggccgac
ctgctgggggaagtcatcccagggctggagatcaaccagcaggaggagccgggcttcgag
gtcatcaccaggatcgacctggggacgaggccgcaggtgagccgggcggagccggtgtcg
gcagacgagtggagtaaacaccaggaccccgagggcaggatagagaacaggcctgcgctc
aggcagaggatctttaaggggggtctgtgtcacgccatgaggagggaagcctggaagttc
ctgttggggtattatccgtggacgagcacgttggaggagaggaagtctctgcagaaagcc
aaaacagatgaatacttccggatgaagctgcagtggaaatccatcagtgaggagcaggag
aggagaaactccagactgagagactacaagagcctgatcgagaaagacgtgaaccgaaca
gaccgaacgaaccgcttctacgaaggtctgaacaacccgggcctgaccctgctgcacgac
atcctgatgacctactgcatgtacgacttcgacctgggttacgttcaggggatgagcgac
ctgctgtcgccgatcctgttcgtcatggagaacgaggtcgatgcgttctggtgtttcgtc
tccttcatggaccagatgcaccagaactttgaggagcagatgcagggcatgaagacacag
ctgatccagctcagcacgctgctcaggctgctggacctggcgttctggaactacctcgag
tcccaggagtccggatatctgtacttctgcttccgctggctgctgatccgcttcaagagg
gagctgatcttcagcgatgtcctgcggctttgggaggtcatgtggaccgagctgccttgt
cagaacttccacctgctggtctgctgtgccatcctggactctgagaagcagaagatcatg
gaggagaactatggcttcaacgagatcctgaagcacatcaatgagctctccatgaagctc
aacatcgaggagatcctgcagaaagccgagggcatctaccttcagatccgcagctgcaag
gacttgcctcactccatcagctccatcctgggcttcgacacgcagcaccgagtctccagc
caggcggactctggctctcgacccgtccagcagcaggacgcctgttctaacggacactgc
agagacaacagaccccagaacagctgcagaggggtcttcacgtcgtag
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