Xiphophorus hellerii (green swordtail): 116710151
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Entry
116710151 CDS
T07363
Symbol
snta1
Name
(RefSeq) alpha-1-syntrophin
KO
K24063
alpha-syntrophin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116710151 (snta1)
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GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
SOS1_NGEF_PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116710151
NCBI-ProteinID:
XP_032404903
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Position
20:10522155..10563361
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AA seq
487 aa
AA seq
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MAAAMKAQKTGLLELRLTVDRWIRVLATLSEDTLTVNPGEGAEEPAKPNPSPAGAVNGDP
PNLSSSPVPETITNVKRTVRVTKQDVGGLGISIKGGKENKMPILISKIFKGLAADQTEAL
YVGDAILSVNGFDLREATHDEAVQALKKTGKEVILEVKYIKEMSAFFKSAGSPGANLPWD
SPPSTPQRSNEVFPIEVKEPRIIPLRMCQVSRKECPPDTENRYFEVISSNRKNSMFLRAK
DPAMAQSWYNAIQAAAASLLPQVKEEMKSMQPGMDVKHLGWLTEQMSQGPEKPLFAVLTE
KDLLLYSSFPESKESLRNPTKSHTLITTRLVHSGPGKSSSLLDSELSFGLRSGTKQGVET
HVFRVDTAKELSTWTHLLVEGCHNAAELIKEVIAACSWNGKECMLGVHIDDGFTLFTDEM
GVRKNILLQQPFERLRMSSDDGVRMMFLDFGGPEAEIKLDLRCCPKTLVFIIHSFLSAKV
KRLGLLA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgcgatgaaggcgcagaaaacgggactgctggaacttcgattgaccgtggac
cgctggatccgtgtgctggccactctttccgaggacactctcaccgtaaaccccggtgag
ggagccgaggagcccgcgaagcccaacccgagtcccgcaggtgctgtcaacggagaccct
ccgaacctcagctcgtccccggtccctgaaaccatcaccaacgtgaagcgcaccgttcga
gtgaccaaacaagatgtgggaggacttggaattagtatcaaaggtggaaaggaaaacaaa
atgcccatcctcatttcaaaaatttttaaaggccttgcagctgaccagacagaggcgctt
tacgtcggggatgccatattgtctgtcaatggttttgacttacgagaggccacgcacgac
gaggctgtgcaggcactaaaaaaaactggcaaagaagtcatccttgaagtgaaatacatc
aaggaaatgtctgcattttttaaaagcgccggttcccctggagcaaacctcccttgggat
tctcccccctctacacctcagaggagcaatgaggtcttccccatcgaggtgaaagagcct
cgcatcatcccactgaggatgtgccaggtgtcgcggaaagagtgccccccagacacagag
aacaggtatttcgaggtgatttcatccaacagaaagaactcaatgttcctgcgggcaaaa
gacccagccatggctcagtcgtggtacaatgccatccaagctgctgctgccagcctttta
ccacaagtgaaggaggagatgaagagcatgcaacctggcatggatgtcaaacatttgggc
tggcttacagagcagatgtcccagggtccagagaaacctctctttgcagtgttgacagag
aaggacctgcttctgtattcctcctttcctgagagcaaagagagcctaaggaaccccacc
aagagtcacaccctcatcacaaccaggctggtccactctggtcctggaaaaagttcctct
ctattggactctgagttgtcattcggcttgcgttcaggcaccaagcagggcgtagagact
catgtgttcagagtggacactgccaaggagctgtccacgtggactcatctgttggtcgag
ggttgccacaatgctgcagaactcatcaaggaggtcatagcagcctgtagttggaatgga
aaagagtgcatgctgggagtgcacattgacgacggcttcacgctattcacagatgaaatg
ggtgtcaggaaaaatattctcctccagcagcctttcgagcgcctccgaatgtcctcagat
gatggagtccgtatgatgtttctcgactttggaggcccggaggctgaaattaaactggac
cttcgctgctgcccaaagaccttagtgttcatcatccactctttcctttctgctaaggtc
aagcgacttggcctcctggcatga
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