Xiphophorus hellerii (green swordtail): 116710209
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Entry
116710209 CDS
T07363
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein
KO
K10891
fanconi anemia group D2 protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116710209 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116710209 (fancd2)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
116710209 (fancd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
CCDC53
Phage_cement
Motif
Other DBs
NCBI-GeneID:
116710209
NCBI-ProteinID:
XP_032404993
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All DBs
Position
20:complement(18443576..18457925)
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AA seq
1442 aa
AA seq
DB search
MMRKKRHSSVEKVAGTTAATKAKKSRNTKDAASEEASESAFVTFVKKAGVGLKHNGASHE
IAVDQVVFQKRIQQQLQKSPRYPDILKEFITDLEAYIENPDRFRNCLLPCIPQLSEGDMR
SVSSFQESLIRMLLGIEMLQTLIISTLLEKLPEFMFDGTVDGGLNIPRMIINQLKWLDRV
VDTKELAVKLMELVSVAPVEVQRDIITSLPEILEDSQHHDIARELNALLQENTQLTVPIL
DALSSLNLSSSLLTEVREAVMATLAAVQLEDLPVVVKFILHSVSASNAYEVVSNLRQKLE
LEQCVLPPVLQASQSRMKSKSSAGSASTAAPGNSQDSVTLVLDCIKSAVRFQKTISEAWL
KSIESVGDIEDHKVLDLLVLFILHCTNANQSRRGAERVLKLKVRTGLMQEALLQKTFRDY
SQVMRGYFPSILALAQSLVRSPDPCVVPFGGQMYRHSFTAFDSYCQQEVVGSLVTHVCSG
VSGEVDVALELLFSLVMEKPSEMALYAVFVKGILDYMDNLTPQQIRRLFHLLSRLAFGQQ
QQGSHIQDDMHIVIRKQLSSTVPKYKRIGIIGAVMIVGSMGALRPKGKESQSSSLSQETL
RQVTALLELVKSSSESSPEAAALYCDELANLIWSSALDPQVEEMIGMSVLDDFQDDFVVD
LGPDIAGSFIFPACAMYNLEEDESQGGIAINLLPLLAKETQNKGEQQSQIGKQKQQKRVS
PLCLSPFFRLLRLCEEKRHQGDLEEIDALVGCPLILTNMDVVDKVDSLSKAEREFICTLL
FHTINWFREVVNAFCKQKETEMKMKVMTRLQNITFLQTLLERALAGTTGYMPPVSNFDGE
TTDGISFGVPVSKGKKDGTGKKRKAPGKNAPEGVSQPEEATEADETQQEQPEKEKEKENR
LGVSLTAYRPFFRELDMEVLSVLQCGLLSRSLLDSELHTKVQEEVVLGPTELVFLLEDMQ
HKLEFSLTAAPAKRAPFLKMRADKTVGFSHLQQRSTKDIASYCVQLLPALCSHLENCHNH
FQTLLSENNGVVDGPSTDVEEHQVMSSGYQLLLQVINTTFSWSGFSQPGQRSLLKKALGL
LAGRLKEGGPELTLEQLVKHSFEYLLNFRSTMPSLSTALCLSQLLSTVSEKGGNPGAYRE
QTASLARRFLNQSWVTASGEKERGSKFNEALHTLLSIYLEHVDDVLKAVEEIAGEGITEL
INTSKDESSASWPTLNRQTFLVFYKVLMAELEKAARRIPAGKMSDNSEAQSEKLLTWNLA
VRDFHILVNLVKVFDSRPVLNVSLKYGRLFLESFLKLGMPLLDYSFKRHKEDVQSLLKTF
QLSTRQLHHMCGHSKIHQDTSLTNHVPAVKKSLELFVYRVKAMLTLNNCQEAFWMGNLKN
RNLKGEEILSQRSQGSDDDDEEEEGDQELPPPQEQSDDEDQEADSEENSRISRKEDSTED
SD
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcaaaaagcgacactcctctgtggaaaaagtagcgggaacaactgccgccaca
aaggcaaagaagagtcgcaacactaaggacgctgcttcagaggaagcaagtgaaagcgct
tttgtcacttttgtaaaaaaagccggtgtcgggttgaaacataatggcgcatcgcatgag
atcgctgttgatcaggtggttttccagaagcgaatacagcagcagctgcagaaaagcccc
agataccctgatatcctgaaggagtttataacggatttggaggcttacattgagaacccg
gacaggttcaggaactgccttcttccatgtatcccacaactatctgaaggagacatgaga
tctgtcagctcattccaggaaagcctcatcagaatgttattggggatcgaaatgctgcag
actttgataatcagcaccttacttgagaaactccctgaatttatgttcgatggcactgtg
gacggaggactcaatattcctcgtatgattattaaccagctgaaatggctggacagggtc
gtggacacaaaggaacttgctgtgaagctgatggagttggtgtcagtagcaccagttgag
gtgcagcgtgacatcatcaccagtttacctgagatattggaagactctcagcaccatgac
atagccagggagctcaatgctttgcttcaggagaacactcagctaacggttcccatcctg
gatgccctctccagtctaaacctctcgtcctcattactgacggaggtccgagaggcggtt
atggccacactcgctgctgtccagctggaagacctacccgttgtggtgaagttcatcctg
cattctgtctcagcttcgaatgcatatgaagtggtgagcaatctgcgtcaaaagctggaa
ctggagcagtgcgttcttcctccggtgctgcaggcctcacagagccgcatgaaaagcaaa
tcatcagcaggatctgcttctacagctgctcctggcaacagtcaggacagcgttacgttg
gtacttgactgcatcaagtcagcagtccggttccagaaaactatttctgaggcttggctc
aagtcaattgagtcggtgggtgatattgaggaccacaaggttttagatctgctggtgctc
ttcatcctgcactgcaccaacgccaaccagagccgccggggcgccgagagagttctgaag
ctcaaagtgaggactggactcatgcaggaggctctgctgcagaaaaccttcagggactac
tctcaggtcatgcgagggtacttcccctcaatcctggctcttgctcagagtttggtgcgc
tcccctgatccctgcgtggtgccttttggtgggcaaatgtaccgccactctttcactgca
tttgactcttactgccagcaggaggttgttggctctcttgtgacccatgtgtgcagtggt
gtcagtggggaggtagacgtggccctggagctgctcttcagtcttgtaatggaaaaaccc
tcagaaatggctctctatgctgtttttgtgaaggggatcttggactacatggacaatctc
acaccacagcagatcagaagactcttccaccttctgagcagactggcatttgggcaacag
cagcaaggatctcacatccaggacgacatgcacatagtgatccgtaagcagctctccagc
actgtgccaaagtacaagcgtataggcatcattggcgctgtgatgattgtcggcagcatg
ggagccttgagacctaaaggaaaggaatcacagagcagctctctttcccaggaaacatta
agacaggtgacggctctgctggagctggtgaagtcgagcagtgaaagctctcctgaggca
gcggctctgtactgcgatgaactggccaacctgatctggagttctgcactggacccacag
gtggaggaaatgattggaatgagtgtcctggatgacttccaggatgactttgtagtggac
cttggaccagatatagcaggatcttttatctttccagcctgtgccatgtacaaccttgag
gaggatgagagtcagggaggtatcgccatcaacctgttgcctctgctggccaaagaaacc
caaaataaaggagagcagcaatctcaaattgggaaacagaagcaacaaaagcgggtgtcc
cctctctgtttatctccctttttccgcctattgaggctttgtgaagagaaacggcatcag
ggagatctagaagagatcgatgccctcgtgggatgtcctctgatcctgacaaacatggat
gtagtggacaaagttgacagcctgtcaaaagctgagagggagttcatctgtactttgctc
tttcacacgatcaactggttcagagaggtcgtgaatgcattctgcaaacagaaagaaacg
gagatgaagatgaaggtgatgactcgcctgcagaacatcacttttctgcagacactgttg
gagagggctctcgcaggaactactggttacatgccacctgtttcaaactttgatggagaa
actacagatgggataagttttggtgttcctgtgagcaagggaaagaaagatggaacgggg
aaaaagagaaaggctcctggtaagaatgccccagaaggcgtctctcagcctgaggaggcg
actgaagcagatgaaactcagcaggagcaaccagaaaaggagaaggaaaaagagaaccgg
ctcggtgtcagtttgacagcttacaggccgtttttcagagagctggacatggaggtgctc
agtgttctgcagtgtggtttgttgtcacgctcgctgctggactcagagctccacactaag
gttcaagaggaggtcgtgttgggccccactgagctggtcttcctgctggaggatatgcag
cacaaactggagttcagtctcactgccgctccagcaaagagagctccgttcctcaagatg
agggcggataaaactgtgggattctcacatctgcaacagaggagtacaaaagacattgcc
tcgtactgtgtccagctgttgcccgccctctgttcacatctggaaaactgccataatcac
tttcagactctgctgtctgagaacaatggcgttgtggacggaccttcaacagatgtggag
gagcaccaggtaatgtcatcaggttaccagctgctcctgcaagtcataaacaccaccttc
agttggtctggattcagccagccgggacagcggagcttgttgaagaaagcgctgggactt
ttagctggacggcttaaagaaggaggtcctgaactgaccctggaacagcttgtcaagcac
agttttgagtacctgctgaacttccgcagtacgatgccgagcctgagcacagctctgtgt
ctctcccagcttctgtcaactgtttcggagaagggaggaaaccctggcgcttatagagag
cagactgcttccctggcgcgccgtttcctgaaccaaagttgggtgacagctagcggagag
aaagagcgaggcagcaaattcaatgaggcacttcacacactccttagcatctaccttgag
catgtcgacgatgttttgaaggcagtggaggaaatagccggagaaggaatcaccgagctg
atcaacacatccaaagatgaaagctctgcttcctggcccactctgaacagacaaacgttc
ctggttttctacaaagttttgatggccgagctggagaaagctgccaggaggattcctgct
ggtaaaatgagcgacaactctgaggctcaaagtgagaagctgctgacatggaacctggct
gtcagagactttcacatcctagtcaacctggtgaaggtgtttgattccaggccagtcctt
aatgtgtccttaaagtatggacgactttttctggagtcttttctgaagttgggaatgcca
ctgctagactatagtttcaagaggcacaaggaggatgtccagagtttgctgaagaccttc
cagcttagcactcgacagctccaccacatgtgtggacattccaagattcaccaggacacc
agcctaactaaccatgtgccagctgtgaagaagagcctggagctgtttgtgtacagagtg
aaggccatgctgacactcaacaactgccaggaggccttctggatgggaaacctgaagaat
aggaacttaaagggtgaagagattctttctcagagatcacaagggagtgatgacgacgat
gaagaggaggagggggatcaggaattaccgccaccacaggaacagtcagatgacgaggac
caggaagctgattctgaggaaaacagtaggatcagcagaaaggaggacagtacagaagat
tctgattaa
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integrated database retrieval system