Xiphophorus hellerii (green swordtail): 116710268
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Entry
116710268 CDS
T07363
Name
(RefSeq) parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xhe04030
]
116710268
G protein-coupled receptors [BR:
xhe04030
]
Rhodopsin family
Vision
Opsin
116710268
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7tm_4
Serpentine_r_xa
TAS2R
Motif
Other DBs
NCBI-GeneID:
116710268
NCBI-ProteinID:
XP_032405111
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Position
20:complement(17091156..17095408)
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AA seq
340 aa
AA seq
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MQPPALLPNASFYMDPPEEPPLSRAGFIVLSVIMAFFTIPAIVLNGTVIIVSLMHKQLRQ
PLNYALVNMAAADLGTAMTGGVLSVVNNAQGYFSLGRTGCVMEGFTVSLCGITSLCTVAL
IAVERMFVVCKPLGQVTFQKKHAVGGIVLSWLWSLAWNLPPLFGWGRYDLEGVGTSCAPD
WHNTDPNNVSYLIAYFAVCFAFPLTLILVSYAKLLWTLHQVSKMACVEGGAVAKGEMKVA
SMVILMVLSFLAAWLPYAGLAMFVVCRPDAKIHPLVGTLPVYLAKSSTAYNPIIYILLNK
QFRKYAVPFLLCGKELVEEDEASEATTTVEAMSTNKVAPS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctgcgcttttaccaaatgcttcgttctacatggatccaccggaggagccc
cctctgtcacgagcaggcttcatcgtactctccgtcatcatggccttttttactattcct
gccattgtgctgaacggtacagtgatcatcgtgtctctcatgcacaagcagctgaggcag
ccgctcaactacgctctggtgaacatggccgcagccgacttgggcacagcgatgaccggg
ggggtgctgtcggtggtcaacaacgcccagggatacttctctctgggcaggacaggctgt
gtgatggagggcttcactgtgtccttgtgtggcatcacatccctgtgcacagtggctctg
attgcagtggagaggatgtttgtggtgtgcaagcctctgggacaggtaaccttccaaaag
aagcatgccgtcggaggtatagtcttgtcttggctctggtctcttgcctggaacttgccc
ccactcttcggctggggcaggtacgatctggagggtgtcgggacgtcctgcgcaccagac
tggcacaacacagaccccaacaatgtctcctacctcattgcttactttgctgtgtgtttc
gcctttcctctcactctgatcctggtctcatatgcaaaacttctgtggacgttacaccag
gtttcaaagatggcctgtgtggaaggtggagcagtagctaaaggggagatgaaggtggcg
tccatggtgattctgatggtgctgtcattcctggcagcctggctgccgtacgccggtctg
gccatgtttgtagtctgcagacctgatgcaaagattcatccgctggtgggcacgctgccg
gtttacctggcgaaaagcagcactgcgtacaatcccatcatctatatcttgctcaacaaa
cagtttcgtaagtacgcggttcccttcctgctttgcgggaaggagttggtggaggaagac
gaggcgtcagaggcaacaaccaccgtggaggccatgtctacaaataaagtggctcccagt
tga
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