KEGG   Xiphophorus hellerii (green swordtail): 116710294
Entry
116710294         CDS       T07363                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116710294 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xhe03019]
    116710294 (rae1)
   03036 Chromosome and associated proteins [BR:xhe03036]
    116710294 (rae1)
Messenger RNA biogenesis [BR:xhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116710294 (rae1)
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116710294 (rae1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_ACSF4 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_HPS5 ExoI_SH3 Beta-prop_WDR41 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 116710294
NCBI-ProteinID: XP_032405161
LinkDB
Position
20:26466110..26472634
AA seq 369 aa
MSLFGTPSSFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCMAFSPPTMPGNFLIAG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLGVCWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKSIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttgttcggaacgccttccagctttggaacaggagggactggtgtttttggaagc
acgacaaccgacagccataatcccatgaaggatgtcgaagtgacctcgcctccagatgac
agcatcagctgcatggcgttcagtcctccaaccatgccaggaaacttccttattgcggga
tcctgggcgaatgatgtgagatgttgggaggtgcaggacaacggacagaccgtccccaaa
gcccaacagatgcacacgggtccggtgctgggtgtctgctggagcgacgatggcagtaag
gtgttcaccgcttcatgcgacaagacggccaagatgtgggatcttaacagcaaccaagcg
atgcagattgcacagcatgacggtccaatcaaatcaatccactggataaaagccccaaac
tacagctgtgtcatgaccggcagctgggataaaacgcttaaattttgggacacccgctcc
cccaaccccatgatgtccctgcagatgcccgagagatgctactgtgccgacgttgtgtat
cccatggcagtggtagccacagctgaaagaggccttatagtgtaccagttagagaaccag
ccttctgagtttcgcagaatagactctcctctcaaacatcagcaccgttgtgttgccata
tttaaggacaaacagaacaagccaacaggctttgcactgggaagcattgagggcagagtg
gcgattcattacatcaatccgccaaacccagccaaagataatttcaccttcaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatctatgctgttaacgccatctcc
ttccatcctgtccacggcacgctggccaccgtgggctccgacggacgcttcagcttctgg
gacaaagacgcgcgcaccaagctgaagacctctgagcagctcgaccagccaatcacagct
tgctgcttcaaccacaacggcaacatcttcgcgtacgcctcgagctacgactggtcaaag
ggccatgagtactacaacccccagaaaaagaactacatctttctgaggaacgccgctgag
gagctgaagcctcggaacaagaaatggtga

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