KEGG   Xiphophorus hellerii (green swordtail): 116710301
Entry
116710301         CDS       T07363                                 
Name
(RefSeq) laminin subunit beta-4-like
  KO
K06245  laminin, beta 4
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04510  Focal adhesion
xhe04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116710301
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116710301
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMB1 LAMININ_IV_B LAMB4 ATG17_like Laminin_II DUF7630 F5_F8_type_C
Other DBs
NCBI-GeneID: 116710301
NCBI-ProteinID: XP_032405180
LinkDB
Position
2:complement(20999043..21023382)
AA seq 1779 aa
MILIFVFVCLPAVKPQDLQDQCPGGSCHPQLGDLMVGREAQLSASSTCGVDGPQNYCIVG
YLEGEKKCFTCDSRLPFSPQGNPQSHRIENVITTFDSDRRLKWWQSENGVHQVSIQLDLE
TVFQFSHLVLTFKSFRPAAMLVERSKDFGRSWKVFRYFADDCSLHFPSVPAEPASFIDDV
VCDRRYSGPEPSAGGEVVLKALDPVFEIDDPYAPNIQELITLTNIRVNFTRLFTLGDTLL
ARRRRDPQEKYYYSLYSMVVQGSCFCNGHASRCVPVDGGRGDVFTQSDMVHGRCVCQHNT
AGENCERCQPFHNDSPWKPGGETTPNICRRCNCHGHSDSCHFDAARYEETGGASGGVCDD
CRHDRTGPQCERCRPFLYQDPQRALEDPHACIPCDCDPAGSHSGGLCDASSGRCLCKENV
EGQRCDRCKHGFFNLRSDNPAGCEVCRCHGLGSVGPCDPLTGSCKCEPMATGLLCDHCVA
GFWGLGNSVFKCSPCDCDVGGASSNMCSSEDGQCSCLPNMVGRRCSDPAPGYFLPSLIYF
LYEAELAAQLTGGSSSPTPSPLPVFPSSSPLVNPALLPSCEQYFRRQGYDFRISNGKVIL
IRRPRHLTRRRRRQNTNPLNRGPLQILPHQGSPEQSGTGLGLVRVTEGVGLRFTVDNLPT
SMEYQLVIRYESESVTDWVARVNIITLSPGDGGCSDDPPSGSLTLILPRSSRLSVLDSRV
CLNARGRYYVEIFFDRQQRSDYAPLLVDSMGLVQSFYSVQDFCSQSDFDSFSHFRCVGLD
VYLGSQESLPKICEGLIKSLSARIHNGAVACTCNVIGSLGSGCSTLGGLCDCKPSVIGRC
CDACAPLTFGFGPEGCKRCECDPQGSLSEACDPSGGQCACRPRVSGRRCDRCESGFWGFP
LCQPCDCNGLSETCDGWTGQCVNCREHSSGLHCDRCVEGYYGNPVSRQPCQPCLCPDILS
SGRFFASSCRYDPQSVRVSCSCREGHTGERCDRCSSGFYGDLRLPGAVCRACSCNNNIDP
DDSDACDGTTGECLRCLHYTTGPRCQFCKPGYYGNALQHNCKECSCDRRGTKATLCPLES
PCFCNRETGQCPCRTGVVGNLCDECEDGFWNLDGASGCQPCSCDPSNSVSNICDKVSGQC
PCRPEFGGRQCDECGENYFGNPNLQCFSCDCNLEGTQRPSCDPETGECICRTGVTGILCD
ECTPGYSSEFPACEKCHECMVLWSENVTDVQRAAQRMRTFILLHGNTQHSTHSQYWQRML
EIHSRLDSFGNMTGFSLPKLEKVEKLYMKIRKMKDAVDTNIILIDPSVLLNNEINNINVE
FQKMLKNLKDKLIKDPNKKETQPVEEMLQEIQKLHKTFMSDEKRVRNSSKAVEDSMDTRW
ETRRKLSMWSSREDLATLEKKVKELNMRQLNQKVCGQPDPEDCSGCPGGQICDGAVPHAQ
KASETAEKVKERLIKFPSSLDESKKKISDVQQVAQDTKDQAQDLQRQISDITKSVEREKN
KTRELIQRVKQYLMDEMVPPGDIEKMANAVLRIQLPRSPAEIQSMINEINKLLNNKFQED
LKKLQDEAKTAQELLQKATEVKEQTKNINVKDILGDIIAADTAQSKANDDLEVANKDRDD
ANDRIQEMENKLNDIEDKLMNQTVGLLEESEALKNKTEQNREMAKEARETAESALTNISN
DRELQGVQEQFELLKQKHLNKTLEDGAADRLQKILKEIEDMQRQMEDRLQQIEDVEQKIQ
LLIQRKEEKIVEVADLLNTVESLQKEIISKAQYYVTCSS
NT seq 5340 nt   +upstreamnt  +downstreamnt
atgatcctcatctttgtttttgtttgtctcccggcggtaaaaccccaggacctccaggac
cagtgccctggcggctcctgtcaccctcagcttggtgacctgatggtgggacgggaagcg
cagctctcagcctcgtccacctgcggtgtggacggaccccagaactactgcatcgttgga
tacctggagggggagaaaaaatgtttcacatgtgactcccgactgccgtttagtccccaa
ggcaacccacagagccatcgtatcgagaacgtcatcacaacgtttgactctgacagacga
ctgaagtggtggcagtctgagaacggagttcatcaagtcagcatccagttggacctggag
actgtcttccagttcagccacctggtcctcaccttcaagagcttcaggcctgcagccatg
ctggtggagcgttcgaaggattttggacgaagctggaaagtttttcgctactttgcagac
gattgttcccttcattttccttcagttcctgcagaacctgccagcttcattgacgatgtt
gtctgtgacagaagatactctggaccagaaccatccgcaggtggagaggtggtgctaaaa
gctctggatcctgtctttgaaatagatgacccatatgctccaaacattcaagagctgatc
accttgacgaatatccgtgtgaacttcactcgtctcttcacgcttggtgacacgctgctg
gctcgcagacgcagagatcctcaggagaaatattattactcgctttacagcatggtggtt
cagggaagctgcttctgtaacggacacgccagccgctgtgtccctgtggacggaggacgt
ggggacgtcttcacccagtctgacatggttcacggtcgctgtgtctgtcagcacaacaca
gctggggagaactgtgagagatgtcagccgtttcacaatgactccccctggaagcctgga
ggagaaactacacccaacatctgcaggaggtgtaactgtcacggtcactcagactcatgt
cactttgatgctgctcgctacgaagagaccggaggtgcaagtggcggcgtgtgtgacgac
tgccgccatgacaggacggggcctcagtgcgagcgctgtcgacctttcctgtatcaggac
ccgcagagggcgctagaggaccctcacgcctgcataccgtgtgactgcgaccccgccggc
tcccacagcggcggtttgtgtgatgcttcaagcggtcggtgtttgtgtaaggaaaacgtg
gagggtcaacgctgtgatcgctgcaaacatggtttcttcaatttgagatcggacaacccg
gctgggtgtgaagtctgcaggtgccacggcttgggaagtgttggaccatgcgatccgctt
acagggagctgtaaatgtgagccaatggccaccgggctgctgtgtgatcattgtgtggca
ggtttctggggtttgggaaactcagtcttcaaatgttcaccctgtgactgtgatgttggc
ggagctagcagcaacatgtgttcttcagaggatggacagtgttcctgtttacccaacatg
gtgggccggcgctgctctgaccctgcacctggttacttcctgccttcgctcatctacttc
ctgtatgaggcggaactcgctgcacagctgacaggagggagttcctcccctactccttct
cctcttcctgtttttccctcttcctctccactggtgaatcccgcccttttgccttcatgt
gagcagtatttcagacgtcagggctatgacttccgaatctccaatggaaaagtgattttg
atacggaggcctcgtcatctcacccgtcggaggagacggcagaataccaaccctttgaac
cgggggcccctgcagatccttccccaccagggctcacctgagcagtcaggaactggtctg
ggattggtcagagtgacagagggggtggggcttagattcactgtggacaacctgccaaca
tcaatggagtaccaactggtgatccgctatgaatctgagtctgtcaccgattgggtggcg
agagtgaacatcatcacgctgtcaccaggcgatggaggctgcagtgacgaccctccatca
ggaagtctgacactgatcctccccagaagctccagattaagtgttctggattcccgggtg
tgtctgaacgccagaggtcgatactatgtggagattttctttgacaggcagcaaagatca
gactacgctcctctgctggtcgactcgatgggactggttcagagtttctattcagtccaa
gacttctgctcccagagtgactttgactctttcagtcactttcgctgcgttggattggac
gtgtatctcggttctcaggagtcacttccaaaaatctgcgaaggactgatcaagagtctg
tcggcacgcatccacaacggagctgtggcctgcacgtgtaacgttattggttctcttgga
tcgggatgcagtacgctgggcgggttatgtgattgtaagcccagcgtgatcggccgttgc
tgtgacgcttgtgcacctctgacctttgggtttggacctgaaggctgtaaacgatgtgag
tgcgaccctcaaggttctctgtcggaggcgtgtgacccgagcggaggtcagtgtgcgtgt
cgcccccgggtatccggtcgacgctgcgatcgatgcgaatctggattctggggattcccg
ctgtgtcagccttgtgactgcaacggcctgtcggaaacctgcgatggatggaccggacag
tgtgtgaactgcagggagcacagcagcgggctgcactgtgacaggtgtgtggagggttac
tatggcaacccggtctccaggcaaccctgtcagccctgcctgtgccctgatatcctgagc
agcggacggttcttcgcctcttcctgtcgatacgacccgcagtccgtcagagtgagctgc
tcctgcagggagggacacacaggtgaacgatgtgacaggtgcagttcgggtttctacggc
gacctgaggttgccaggtgctgtctgcagggcgtgctcctgcaacaacaacatcgacccg
gacgacagcgatgcctgcgacggcacaaccggagaatgtctccgctgccttcactacaca
acgggtccacggtgccagttctgcaagcctggttactatggcaacgccctgcaacacaac
tgtaaagaatgctcctgtgatcgccgggggaccaaggcgactctatgtcccctggagagc
ccctgcttctgcaacagggagacaggacagtgtccctgcaggacgggtgtggtgggaaat
ctctgtgatgaatgtgaggacgggttctggaacctggacggagcgtcggggtgtcagccc
tgcagctgtgacccgtctaactccgtctctaacatctgcgataaggtgtcgggacagtgt
ccctgtcgtcctgagtttggaggaagacagtgtgatgaatgtggagaaaactattttggg
aatccaaacctgcagtgcttttcttgtgactgtaaccttgagggaacgcagcgcccgtcg
tgtgaccctgaaactggtgagtgcatctgtcggactggcgtcaccggtatcctctgtgac
gagtgcactccaggctacagctcagagtttcctgcctgtgagaaatgccatgaatgcatg
gttctgtggtccgaaaacgtcactgacgtccagcgagccgcccaaaggatgaggacgttc
atccttctccatggcaacacccagcattccactcacagtcagtactggcaacggatgctg
gagattcactccagactggacagctttggcaacatgactggtttctctctgccaaagctg
gagaaggtagagaaactctacatgaagattaggaagatgaaagatgctgttgacaccaac
ataattctgatcgacccgtctgtcctccttaacaatgaaatcaataacattaacgtagag
tttcagaagatgctaaaaaacttgaaggataaactcatcaaggatccaaacaagaaagaa
actcagccagtggaagagatgctgcaggagatccagaagcttcataaaaccttcatgtca
gacgaaaagcgggtgagaaactccagtaaagctgtggaggactccatggacaccagatgg
gagactaggcgcaaactgagcatgtggagcagcagagaagatctggcaactctggagaag
aaggtcaaggagctcaacatgcgccaactcaaccaaaaggtctgcgggcaaccggatccg
gaggactgctctggatgtcccggaggtcagatctgtgatggagctgttcctcatgcccag
aaagcttctgagacggcagagaaagtaaaagagcgactcatcaaattcccatccagcctg
gacgagtcaaagaaaaagatcagtgatgtccagcaagtggctcaggacaccaaagaccag
gcccaagacctgcagcgccagatcagcgacatcaccaaatcagtggagagagagaaaaac
aaaaccagagagctcatccagagagtcaaacaatatctgatggatgaaatggttcctcca
ggtgacattgagaaaatggcgaacgctgtcctgaggatccagctaccacgatcacctgct
gagatccaatcgatgatcaatgagatcaataaacttttgaacaacaaattccaggaggac
ctgaagaagctgcaggatgaagccaaaacagctcaggagcttctgcagaaagcgacagaa
gtcaaggagcaaactaaaaacatcaacgttaaagacatcctcggtgacattattgctgca
gacacagctcagagcaaagccaacgatgacctggaggtggcaaataaggacagagacgac
gccaatgaccgaatccaagagatggaaaacaaactgaacgacattgaggataagctgatg
aaccagactgtaggtctgctggaggagagtgaagctctgaaaaataaaacagagcaaaac
agagagatggcaaaagaggccagagaaactgctgagtcagcattgaccaacatttctaat
gacagggagctgcaaggagttcaggagcagtttgagcttttaaagcagaagcacttgaac
aaaacacttgaagacggagccgcagatcgactgcagaaaatcctgaaggagatcgaagat
atgcagagacaaatggaggacagactccaacagatagaagacgtggagcagaagatccag
ctgctgatccagaggaaggaggagaaaatagtcgaggtggccgatctgctgaacacggtg
gagtcacttcaaaaggaaatcatctctaaagctcaatattacgtcacatgttcctcataa

DBGET integrated database retrieval system