KEGG   Xiphophorus hellerii (green swordtail): 116710320
Entry
116710320         CDS       T07363                                 
Symbol
rpn2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
  KO
K12667  dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe00510  N-Glycan biosynthesis
xhe00513  Various types of N-glycan biosynthesis
xhe01100  Metabolic pathways
xhe04141  Protein processing in endoplasmic reticulum
Module
xhe_M00072  N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    116710320 (rpn2)
   00513 Various types of N-glycan biosynthesis
    116710320 (rpn2)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116710320 (rpn2)
SSDB
Motif
Pfam: Ribophorin_II Ribophorin_II_3rd Ribophorin_II_C Ribophorin_II_2nd DUF5859
Other DBs
NCBI-GeneID: 116710320
NCBI-ProteinID: XP_032405194
LinkDB
Position
20:complement(32550379..32567534)
AA seq 662 aa
MIRTMKHALRPSGGLANFGCVSAELFGVLLLSLALAGAQALTPSHHLSLSDVGRLQNLLN
QPYDDLESAYYSVVGLTKLGAAVPDPAEVCQFLKSQLDPGSVDSLFFAAETSKAISGCEI
PVSNETRDILLAAVSEDSSMSQIHRAVGALSSLGLPLASQEVVGALTARINKEDNVMAII
SALQAASRLSQQAELGGILEEIEDLTARLDDLGGVYLQFEEGLEATGLFVAAAYSLSDHV
DMEPPLKEDQVIQLVNSIFSKKSWDSLSEAFSVASAAAALSNNRFHVPVVVSAQGPATVS
HNQPTLQLLVTDVMSQPLASASVLVESAYALASKSTVLNQAPFTHNNGVFELNFMSSKPA
SGYYQFTIGVTGDSRLVANHIELKVKVSTEVAVTNMDLSVVDKDQSIGTKTTRVQYPSKA
KSSFTADSHQNFAMSFQLVDVNNEQELTPHQTFVRLHNQKTGQEVVFVAEPDSKNLYKFE
LDTAERKSEFDSMSGTYSLYLMVGDATLENPILWNVADVILKFAEEEAPVAVQPKTLYVP
KPEIQHLFREPEKKPPTVVSNTFTALVLSPLLLLLILWFKLGANISNFSFSPSTILFHLG
HAAMLGLMYVYWTNLNMFQTLKYLAIIGGVTFLAGNRMLAQKAVKRIAAEQSSRLAKYRS
LR
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgattcggaccatgaagcacgcgctcaggccaagtggtgggcttgctaacttcggctgt
gtgtccgcggagctattcggggttctcctcctcagcctggctcttgctggagctcaggct
ctcacaccgtctcaccacctgtccctgtctgatgtgggccggctccagaatcttctgaac
caaccatacgacgacctggagtccgcatactactctgtggttgggctcaccaagctcgga
gcagctgttccagatcctgcagaagtttgccagttcctgaaatcccagctggatcccggt
agtgttgattctttgttctttgctgctgaaaccagtaaggccatttcaggatgtgagatc
cctgtttccaatgaaaccagggacatcctcctggcggcggtcagtgaggactcgtccatg
tctcagatccaccgggcagtgggcgctctcagctccttggggctcccactcgcttcacag
gaagtggtcggcgccctcacggctcgtatcaacaaggaggacaacgtcatggccatcatc
tcggccctgcaagccgcatcccgcctgtcccaacaggcagaactgggaggaatcctggag
gagattgaggatctgacggctcgcctggacgacctgggaggcgtgtacctgcagtttgag
gaggggctggaggccaccggcctttttgtggcagcggcgtacagcctgtcggaccacgtg
gatatggagccgcctctcaaggaggaccaggtcatccagctggtcaactccatcttcagt
aagaagtcgtgggactctctgtctgaggcgttcagcgtggcgagcgctgctgccgccctg
tccaacaaccgcttccacgtccctgtggtggtcagcgctcagggcccggccaccgtgtcc
cacaaccagccgaccctgcagctcctggtcactgacgtcatgtcccagcctctggcctca
gccagcgttctggtggagtctgcatatgctttggcctccaagagcaccgttctcaaccag
gcaccgttcactcataacaatggcgtctttgaactgaatttcatgtccagcaagccggcc
agtggatattaccagttcactattggtgtgactggggacagccgactggtggccaatcac
attgagctgaaggtcaaagtttccactgaggtggctgttactaacatggacctctctgtg
gtggacaaggaccagagcatcggcacaaagaccaccagagtgcagtatccctccaaagcc
aagagctcctttacagcagacagccaccagaactttgccatgtccttccagctggttgac
gtcaacaatgagcaggagctcacccctcaccagacgtttgtccgactgcacaatcagaaa
accggccaggaggtcgtatttgttgccgaaccagacagcaagaacctctacaagttcgag
ttggacacggctgaacggaagtcagagttcgattctatgtctggtacctactctctctac
ctcatggttggagatgccaccctggagaatcccatcttgtggaacgtggctgacgtcatc
ctgaagtttgcagaagaagaagctccagttgctgttcagccaaagactctttatgtacca
aaaccagagattcagcatttgttcagggagccagaaaagaagcctccaacggtggtttcc
aacaccttcaccgctctcgtactgtctccgctcctgcttctgctcattctgtggtttaaa
ctcggagccaacatctccaacttcagcttctctccaagcaccatcttgttccacctggga
cacgcagccatgttgggcctgatgtacgtctactggaccaacctgaacatgttccagact
ctgaagtacctggcaatcatcggcggcgtaaccttcctagcggggaaccgcatgctggcc
cagaaagcagtgaagaggattgctgcagagcagagtagtaggttggcaaagtataggagc
cttcggtaa

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