Xiphophorus hellerii (green swordtail): 116710331 Help Entry 116710331         CDS       T07363                                  Symbol stab1 Name (RefSeq) stabilin-1 isoform X1   KO K19020   stabilin-1 Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe04148   Efferocytosis Brite KEGG Orthology (KO) [BR:xhe00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     116710331 (stab1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:xhe00536]     116710331 (stab1) Glycosaminoglycan binding proteins [BR:xhe00536]  Hyaluronan   Cell surface receptors    116710331 (stab1) SSDB OrthologParalogGFIT Motif Pfam:  Fasciclin EGF_3 Xlink EGF_STAB1-2 cEGF RIPR_EGF-like_10th EGF_ATRAID_C EGF_MSP1_1 EGF_laminin EGF_Teneurin RIPR_EGF-like_7th EGF FXa_inhibition Motif Other DBs NCBI-GeneID:  116710331 NCBI-ProteinID:  XP_032405218 LinkDB All DBs Position 20:complement(1186642..1250513) Genome browser AA seq 2538 aa AA seqDB search MLLFLLLFLNLCIQTSGQQQTPPPGRCDVPQRLDVYTACTSCAASVTSRCPRGSSQLSTS NCSYLVQVGGRELELPGCHHLCVKNILQPQCCPGHWGPLCLSCPSWSGRICNYNGDCVDG DVGNGTCICKEGFSGFACQECKNPNAFGKKCDEECDCVNGVCNKGPDGDGQCWCQPPYTG RRCDQVSRGCRRCSSYSYCKGEAEDADCDCLPGYRKMKDNRCLAACSQRDCDANAQCSKE ASNIRCTCRPGYDGDGKICIPKNPCLVNNGGCPANSTVCVFKGPDKSSCECMLGMSPVGG SAEHGCQLVSACTAVTCDPTATCQTELDGKPRCLCEPGLIGDGHRCYGNLMARLMELDQR GNQRENLTGAVALFGGGCPMVLSHSGPFTAFFPLLKEPLTDVNKEKVCRNHLVLGQHLYQ DLEGRDFSLYGGGKLRVKANKKFILLSDPSRPFTIVQADLPAANGVIHIIDRPITGSLPD GPARDERFADKTIGEILRKDEKFNRFLSLVDNCGSPPPLRGPGPLTVFVPTNEAVDRARD GSILYMLNSAKQKLQELLRHHVFSQAALTVDDLVALPQVRTMANQLVTVSASDTGEVLLG EKGIRLAGSDIMASNGVIHMIDGLLYPPSILPILPHRCDVTKSKITLGPCIHCSFLDQTA CPEGTVEMESHQIGCDYANLPFGQIHNKGCAKYCNATKPVAQCCSGFYGPDCKPCIGGFQ HPCYDKGTCLDGIHGNGSCSCHPGFKGIACHICSDSSKHGENCDEECRCVHGLCDNRPGS GGACRRGSCSDGFSGDYCDRTATPCNADGLLAHCHVHAYCTHSGLNYRCICRDGYEGDGH SCSPINLCLKSSRGGCDANAECVFVAPGNVSCVCAEGWMGDGTVCVEINNCELQERGGCS PNATCNHIGPGQSECVCKTGYMGDGKVCDFINPCLIHNGGCHDLAKCKLQEGGVHTCTCM DGYGGDGKLCYGSLLDELDMNFKFYNFYKLIQKSRNSEDLSGNLTVLVPSREAMRTLSTE ENSFWTSRHFLPHLLRAHILPGIYSLEDLDRLVGHCLPTLDPAIQWDIRNVSGTLHIGNA SIIRHNQPAINGYIHIIDWVLLPARSGLPPEPPTLMAFLNSSSSFSLFRRAALIYNLTDR LADEEFTLLLPTDEAVTNHLSGTNSSVLDWDVLQYHVIPKELLLPDHLHDGLLKNTLLGS DHQVQFHLTNTNQTAVNDVPLNGSVVETQYGVILVLPQVLRVRRNRCSQPISLLVRGRCS DCDEPPRCMFNYSPIRDRFPANMKPNCFYRKRVGQRRKSVPGCTMKCLRTSSNHACCPGF YGHECFKCPGDDGSPCSNHGQCQDGNHGNGECRCYEGFHGTACEDCEPGRYGVNCTSKCS CDHGKCDDGLAGSGRCLCYKGWKGATCSAEIRDDACGGVCDENANCVTGPQGSAAACVCV AGYEGNGTFCQELDVCSRSNGGCSEFAECTKVSAGERTCACSKGYTGDGVVCLEIDGCLV NNGGCHKAAECIRTGPNTTACQCQTGFQGSGRFCYPVNPCRTDNGGCSKYARCEYLGLGQ RNCTCQRGDIGDGFTCRGITRIELDRDINNQFLRRMLRLSDISLYGGPFTVFVPVKETNN ESKIIEWKMAGRLPDLTRYHVVSCEILTLSDLKTTTRAVSLSGYTLEFSLKEGSVWINNQ SVIVKSDYTTSNGVIHYIDRMLTPYRLEDQPPIDSKMMNFSTAAAFYGYGRFYKLVEDAG LLPVLQLTIHQPFTVFWPSDQALDALPAARQRWLSNPDHQDQLAATVKAHIVRATKLWSV GQSADSRPYRTMHGSTIKCSCDKSLAGAVIINENAARLVQRHLSFKEGVGFGIDQLLEPP GLGAFCNSIQNKTSYGRCGSCLFPPPCSISHVDTGERSQCFQYLSRYHSRIIYDLDDSYS RGCKRVCLFPSWVQKCCKNHYGRDCQVCAGGVENPCGGHGDCNDGISGSGTCKCQPGFTG KACERCQSGYYGDNCTACRCINGRCMDGVAGSGGCICPLNWAGDRCQYALSDPKGGPCSR CHARARCLYGDRCECEPGFEGNGTDCSPVQPPDLCSEYNGGCDVNADCNQTGLIVNCTCR SGYQGDGSSCQPINRCVEQQNGGCSDFASCKFTGPNERQCECLPGYVGNGVQCLEKVMPP VDRCLEENGGCDPVATCKDLHYHANTAGVFHLRSPEGKYKMNFSQADAACQAEDATLATF QQLGDAQQLGMHLCVAGWMAGGRVGYPTRFPSDKCGDNHVGLVMYRDPVDQSSEYDAYCY RLREVSCSCPDGYVGDGDFCNGVLTSVLAATSNFSIFYRLLLDYGGSSSEGRQLLEILAH RKSDVTLFVPHNSGFTQNQSLSGRDLEYHTSANHSRRPFKDLKHQERIASRLGFNLTVTY GNNESCKLVDQRLLLLWDIPAVNGIIHVLEAPLTAPAPLVIHSSSVGHAHSSGRVAAILV TLLACALAALGFYLFRNKMDAFNFHYFKNEDEDTPTRPTLFSIPNPLYSGSRAVAEPFQE VSAAPEPAEPPNILDLDQ NT seq 7617 nt NT seq  +upstreamnt  +downstreamnt atgttgctcttcctgctcctcttcctgaatctctgcatccaaacttcaggacaacagcag acgcctcctcctggtcgctgtgacgttcctcagaggttggatgtttacaccgcctgcacc tcctgcgccgcctccgtcacctccaggtgcccgcgcggctccagccagctcagcacctcc aactgcagctacctggtgcaggtcggcggcagggagctggagctccctggatgccaccac ctgtgtgtgaagaacatcctgcaaccgcagtgctgccctggccactggggcccgctgtgt ctctcatgcccaagctggtcaggaaggatctgcaactacaacggtgactgtgtggatgga gacgtcggcaacgggacctgcatctgtaaggagggtttctctggatttgcttgtcaggag tgtaagaatccaaatgcatttgggaagaagtgtgatgaagagtgcgactgcgtcaacgga gtgtgtaacaagggccctgacggtgatgggcagtgctggtgtcagcctccgtacactggg aggcgctgtgaccaagtgagcagagggtgccgcaggtgcagctcctactcctactgcaaa ggagaagcagaagacgccgactgcgactgcttgcctggatacaggaagatgaaggacaac aggtgtctagccgcctgctcccagagagactgcgacgccaacgcccagtgctccaaggag gccagcaacatcagatgcacctgcagacccggctacgacggagacgggaagatctgcatc cccaagaacccctgcctggtcaacaacggaggctgtcccgccaactccaccgtctgcgtc ttcaaaggacccgacaagtccagctgtgagtgcatgttgggcatgtcgcctgtaggcggc agcgctgagcacggctgtcagctggtctccgcctgcacagccgtgacctgcgaccccacg gcgacctgccagacggagctggatggaaaacccagatgtctgtgcgagccggggctcatt ggtgacggacaccgttgctacggtaacctgatggcgcgcctcatggagctggaccagaga gggaaccagagggagaacctgaccggagccgtcgccttgttcggaggaggctgtcccatg gttctgagtcattctggacccttcactgctttcttcccgctcctcaaagaacctctgact gacgtcaacaaggagaaggtgtgcaggaaccacctggtcctgggtcagcacctctaccag gacctggaggggcgagacttcagcctctacggcggcggaaagctgagagtcaaagccaac aagaagttcatcctgctgagcgatcccagcaggccgttcaccatcgtccaggcggacctg cccgcggctaacggagtcatccacatcatcgaccggccaatcacaggcagccttcccgac gggccggcccgggacgagcggtttgctgacaagacaatcggggagatcctgaggaaagat gagaaattcaaccgcttcctgtctctggtagataactgtggttccccccctcctctccgc ggacccgggccgctcaccgtgttcgtccccaccaacgaggcggtggaccgggcccgagac ggcagcatcctgtacatgttgaacagcgcaaagcagaaactccaggagctgctcagacat cacgtcttctcgcaggctgccctcacagtagatgacctggtcgcccttcctcaagtccgg acgatggccaatcagctggtcaccgtctctgcctccgacactggggaagtcctgctgggg gagaagggaatccgcctggccggctccgacatcatggcctccaacggcgtcatccacatg atcgacgggctgctgtacccgccctccatcctgcccatcctgccgcaccgctgcgacgtc acaaagagcaagatcaccctgggtccctgtattcactgcagcttcctcgaccagactgcg tgtcctgaaggcaccgtggaaatggagagtcatcagatcggctgcgactacgcgaatctt ccttttggacaaatccacaacaaaggctgtgccaaatactgcaacgccaccaagccggtg gcgcagtgctgcagcgggttctacggtccggactgcaagccatgcatcggaggcttccag catccctgctacgacaaaggaacgtgtctcgacggtatccatggtaacggctcctgcagc tgtcacccggggttcaaaggaatcgcctgtcacatctgctcggattcgtccaaacatgga gaaaactgtgacgaagagtgtcgctgcgtccacggcctgtgcgacaaccggcccggcagc ggcggcgcgtgtcggagggggtcgtgttcggacgggttctctggagattactgcgaccgg acggccacgccctgcaacgcagacggcctgctggctcactgccacgtccacgcctactgc acacactccggcctcaactacaggtgtatctgcagggacggatacgaaggcgacggccac tcctgctctcccatcaacctgtgcctgaagagcagccgcggcggctgcgacgccaacgcc gagtgtgtgttcgtggctcctggtaacgtttcgtgtgtgtgcgccgagggatggatgggc gacgggacggtctgcgtggaaatcaacaactgtgagctgcaagagcggggcggctgcagc cccaacgccacctgcaaccacattggaccgggacagagcgaatgcgtttgtaaaactggt tacatgggagacggaaaggtgtgcgacttcatcaatccctgcctgatccacaatggaggc tgccatgacctggccaagtgtaagctgcaggagggcggcgttcacacctgcacctgtatg gacggctacggcggcgatgggaagctgtgctacgggtcgctcctggacgagctggacatg aacttcaagttctacaacttctacaagctgatccagaagtccagaaactcggaggacctg agtgggaacctgaccgttctggttccgtctcgggaagccatgaggactctgagcacagag gagaactcgttctggaccagccggcacttcctgccccacttgctgcgggcccacatcctc cctggcatttactctctggaggatctggaccgcctggtgggacactgcctgcccactctg gacccggccatccagtgggacatcaggaacgtcagcgggacgctccacatcggaaacgcc tccatcatcagacacaaccagcctgccatcaacggctacatccacatcatcgactgggtt ctgctcccggcccgttcaggcctcccccccgaaccgcccaccctcatggcattcctcaac tcgtcctccagcttctctctcttcagacgggccgctctgatctacaacttgacggatcgt ctcgccgatgaggaattcactctgctgctgccgacggacgaggccgtcaccaaccacctc agcgggacaaactcatcggttctggactgggacgtgctgcagtaccacgtgattcccaag gagctgctgttgcccgaccatctgcacgacggcctgctgaagaacacgctgctgggctcg gaccaccaggtccagttccacctgaccaacaccaaccagacggccgtgaacgacgttcct ctgaacggcagcgtcgtggagacgcagtacggcgtcatcttggtcctgccgcaggtcctg cgggttcggcgcaacagatgcagccagccgatctccctgctggtcaggggccgctgctca gactgcgatgaacctcctcgatgcatgttcaactacagcccaatccgggatcggtttcct gccaacatgaagcccaactgtttctaccggaagcgggtcggacagcggaggaagtcggtg ccgggctgcaccatgaaatgccttcgaacctcctcgaatcacgcctgctgccccggtttc tacggccacgagtgcttcaaatgccccggagacgacggcagcccctgctccaatcacggc cagtgccaggacggtaaccacggcaacggggagtgccgctgctacgagggtttccatggc accgcctgtgaggactgcgaaccgggccgctacggagtaaactgcacctccaagtgctca tgtgaccacgggaagtgtgacgacggtctggcaggaagcggcaggtgtctttgctacaaa ggctggaaaggagctacctgctctgcagagatcagagatgacgcctgcggcggcgtctgc gatgagaatgccaactgtgtaacgggaccgcagggctcggctgctgcctgtgtttgtgtc gccggttatgaggggaacgggacgttctgccaagagctggacgtgtgcagcaggtcaaat ggtggatgctcagagttcgccgagtgtacgaaggtctctgctggggagaggacctgcgcc tgcagcaagggttacaccggagacggcgtcgtctgtctggaaattgacggctgtctggtc aacaacggaggctgccacaaagcagcagagtgcatcagaaccgggccgaacactaccgcc tgccagtgtcagactggcttccaggggtcagggaggttctgctacccggtcaacccctgc agaactgataacggcggctgcagtaaatacgctcgctgcgaatacctgggcctgggccag aggaactgcacctgtcaaagaggagacatcggcgatggctttacctgcagaggaatcacg cgcattgaactggaccgggacataaacaaccagttccttcgcagaatgctgaggctgtcg gacatcagtctctatggcggacccttcaccgtcttcgtacctgtaaaggaaaccaacaat gaatccaaaatcatcgagtggaagatggcgggccgcctgcctgacctgacccgttaccac gttgtttcctgtgagattctgaccttaagtgacctcaaaaccaccacgagggccgtctcc ttgtcaggatacactctggagttcagcctgaaggagggctcggtgtggatcaacaaccag tcagtgatcgtgaagagcgactacaccacgtctaacggagtcatccactacatcgaccgg atgctgacgccctacagactggaggaccagccaccgattgattccaaaatgatgaacttc agcaccgcagctgcattttatggctacggacgcttttacaaactcgttgaggatgcaggg ctgctgccggtgctgcagctgaccatccatcagcccttcaccgtcttctggcccagcgat caggcgctcgacgcgctgccggcggccaggcagcgctggctctccaatccggaccaccag gaccagctggccgccaccgtcaaggctcacatcgtccgcgccaccaagttgtggagtgtt ggccagtctgctgacagcaggccgtaccggaccatgcacggatcgaccatcaagtgcagc tgcgacaagtcgctggcgggggccgtgattatcaacgagaacgcggccaggctggtgcag cgccacctgagcttcaaagagggtgtggggttcgggatcgaccagctgctggagccgccg ggcctgggagcgttctgcaacagcatacagaacaaaacctcctacggccgctgtgggagc tgtttgttccccccgccctgctccatcagtcatgtagacacgggggagaggtcgcagtgt tttcagtatctctccaggtatcacagccggattatttacgacctggacgatagttacagc aggggctgcaagagagtttgcctgtttccttcctgggtccagaagtgctgcaagaaccac tatggcagagactgtcaggtgtgtgcaggtggagttgaaaacccgtgcggtggccatgga gactgcaacgacggcatttcaggttcaggaacctgcaaatgccaaccaggattcacagga aaggcctgtgaacgttgtcaatctggttactacggtgacaactgcacagcctgcaggtgc atcaacgggcgctgcatggacggcgtggccggcagcggtgggtgtatatgccctctgaac tgggcaggagatcgctgccagtacgcgctctctgatcctaaaggcgggccgtgttcgcgg tgccacgcccgggcccgctgcctgtatggagaccggtgtgagtgtgaacccgggtttgag ggcaatgggacggactgcagtccggttcaacctcccgacctctgctccgaatacaacggc ggctgtgacgtcaacgcagactgcaaccagacggggctcatcgtaaactgcacctgccgc agcggttaccaaggagacggctcctcctgccagccaatcaacagatgtgttgagcagcag aacggcggctgcagtgacttcgcttcctgcaagttcaccggaccgaacgagcgccagtgt gagtgcctgccagggtatgtgggtaatggagtccagtgcctggagaaggtgatgccccca gttgaccgctgcctggaggagaacggaggctgcgacccagtggccacttgcaaggacctt cattaccatgccaacacagccggagtcttccacctgcgctccccagaggggaagtacaag atgaacttcagccaggcggacgccgcctgccaggctgaggacgccacgctggccacgttt cagcagctgggggacgctcagcagctcgggatgcatctgtgtgtcgccggctggatggca ggaggcagggtgggctacccgactcgctttccgtctgacaaatgtggcgacaaccacgtg ggcctggtgatgtacagagacccggtggaccagagcagcgagtacgacgcctactgctac cggctcagagaggtgtcctgctcgtgtcctgacggctacgttggagacggggacttctgc aacggggtcctgaccagcgtcctggcagcaaccagcaacttctccatcttctaccggctg ctgttggactacggcggctcgtcctctgagggccggcagctcctcgaaattttggctcac aggaagtctgacgtcacgctgtttgttccccataactctggattcactcagaaccagtct ctttctgggagagatctggaatatcacacctcagccaatcacagcagacgaccatttaag gatctgaagcaccaggaacgcatcgcatcgcggctcgggttcaacctgaccgttacctat ggcaacaatgagagctgtaagctggtggaccagcggctgctgctgctgtgggacattccg gccgtcaacgggatcatccacgtcctggaggcgccgctgacggcccccgcccccctggtg atccacagcagctccgtaggccacgcccactccagcggcagggtggcggccatcttggtt acattgctggcgtgtgcgttggcggctctggggttctacctgttcagaaataagatggac gccttcaacttccactacttcaagaacgaggatgaggacactccgacccggcccacgctg ttctccatccccaacccgctctacagcggctccagggctgtcgccgaaccgttccaggag gtgagtgcagcaccagaaccagcagaaccgccaaacattctggacttggaccagtaa

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