Xiphophorus hellerii (green swordtail): 116710357
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Entry
116710357 CDS
T07363
Symbol
mars1
Name
(RefSeq) LOW QUALITY PROTEIN: methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00450
Selenocompound metabolism
xhe00970
Aminoacyl-tRNA biosynthesis
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
116710357 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116710357 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xhe01007
]
116710357 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116710357 (mars1)
Enzymes [BR:
xhe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
116710357 (mars1)
Amino acid related enzymes [BR:
xhe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
116710357 (mars1)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
116710357 (mars1)
Prokaryotic type
Other AARSs
116710357 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_2
GST_N_2
GST_C_3
GST_C
GST_N_3
HTH_23
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
116710357
NCBI-ProteinID:
XP_032405270
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All DBs
Position
20:11756407..11771704
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AA seq
921 aa
AA seq
DB search
MELFVSEGNPHCLKVLAALEVTGVQCGVQFVNHEGKVVPFLPRPAVPTLFLPSGQHLFSS
NTICRYLFELNGPESSDQCNQWLEWEATILQPALLRALHLAALQGKGSEVPKVLQGPLNV
LDQSLAKGSMAYLTGEAVSVADVVLWGALHPVLSVSSLELSDHKSAKAWFDRVAAVRGCQ
SAAQKVLQGKGLEAMKSYMQKQPAPQSRDTQPCNSSPAENDEGERTVSEEEMEAAALTWS
KDLNACSYPAEKQHPVMPQEGNRNVLITSALPYVNNVPHLGNIIGCVLSADVFSRYGQLR
RWNVLFVCGTDEYGTATENKAREEGLTPQQICDKYHAVHSSIYKWFQIDFDFFGRTTTEK
QTEIAQDIFWRLHKNGFLVEDTVEQLRCENCQRFLADRFVEGTCPHCSYPEARGDQCDKC
GRLINAVELREPQCKVCRQTPEIRSSKHLFLDLPKLETQLENWLERSTSSGDWTANAKQI
TRSWLRDGLKPRCITRDLQWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTNEWEKWWK
NPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVSHLIATEYLNYEDTKFSKSRGVG
VFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRGGMFV
TKFFGGCVPAMELQQEDKKLLAVVGWELQQYIQLMDKVKIRDALKHILNISRHGNQYIQV
NEPWKKIKGGESERQRAGTVTGVSVNIACLLSVMLLPYMPAVSQTIRDQLNAPQTCINTM
LQGPGTFVCALRAGHRIGTVSPLFQKLEADQIEALKKRFGGQQPEDEPSNKKITASTQPA
AVPAPPVVAEVKVVDGSDPEKAKQLAEAVAEQGDKVRALKSQKAEKAIITAEVSKLLDLK
KQLALAEGKSPEPAPQKGKKK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtttgttagtgaaggcaacccgcattgtctgaaggtgttagctgcactggaa
gtaacaggagttcagtgcggcgttcagttcgtcaaccacgaagggaaggtggtgcctttc
ctcccccgtccagctgtgcctactctttttctacccagtgggcagcaccttttcagctcc
aacactatttgcaggtacctgtttgagttaaatggaccagaatccagtgatcagtgcaat
cagtggcttgagtgggaagccacaattctccagcctgcactgctacgggctcttcacttg
gcagcgcttcagggaaaagggtcagaggttcccaaagttctccagggtcccctaaatgtc
ttggaccaaagcttggccaagggcagcatggcatatttaactggggaagctgtttcagtt
gctgatgttgttttatggggtgccctgcatcctgttttatccgtctcttctctagaattg
agtgatcataaatcagcaaaggcttggtttgaccgtgttgctgcggtgcgtggctgtcag
tctgcagctcagaaagtgctgcagggaaaaggcctggaggccatgaagagctacatgcag
aaacagcctgcacctcagagcagagacacacagccatgcaacagcagccctgctgagaat
gatgaaggtgagcgtaccgtttcagaagaggagatggaagcagcagctctcacctggagc
aaggatttaaacgcctgctcctatccagctgaaaagcaacatccagttatgccacaagag
gggaaccggaatgtcctcatcaccagcgccttgccatatgtcaacaatgtcccccacctg
ggtaacatcattggctgtgtcctcagtgcagatgttttctccagatatggccagctgcga
aggtggaatgtgttgtttgtctgtggcacggatgagtacggcacggctaccgagaacaag
gccagagaggaaggcctgacaccgcagcagatctgtgacaagtaccatgctgttcactcc
agtatctacaaatggttccagattgactttgacttctttgggagaaccaccactgagaag
cagacggagatcgctcaggatatattctggcgactccacaagaatggatttcttgttgaa
gacacggtggaacagcttcgctgtgaaaactgtcagcgcttcctggctgaccgctttgta
gagggaacgtgtccccactgcagctatccagaggctcgcggtgatcagtgtgacaagtgt
gggcgcctcatcaacgccgtggagctcagggaacctcagtgcaaagtctgcaggcagact
ccagaaatccgctcctccaaacatctcttcttggacctgccaaagctagaaactcagttg
gagaattggctagagagatcaaccagctctggagactggacagcaaacgccaaacagatc
actcgctcttggctcagagatggactcaagcctcgctgcatcaccagggacctgcagtgg
ggaacaccagtacctcacccagactttaaagagaaggtgttctacgtttggttcgatgct
cctattggttatctgtctattactgccaactacaccaacgaatgggaaaagtggtggaaa
aatcctcatcaggtggagctgtacaacttcatggcgaaggacaatgtgccgttccacagt
gtggtgtttccctgctccctactgggagcccaggacaactacactctggtcagccatcta
attgctactgaatatctgaactacgaggacacaaagttctcaaagagccgtggtgtcggt
gtgttcggtgacatggcgaaggacactggcatcccttcggacgtatggcggttctacctc
ctgtatgtgcgtccagaaggacaagattcagctttttcttgggctgacatggccctaaag
aacaactctgagctgctcaacaatttggggaacttcatcaacaggggtgggatgtttgtg
accaagttttttggaggatgtgtgcctgcgatggagctacagcaggaagacaagaagctc
ctggctgtggtgggctgggagctgcagcagtacatccagcttatggacaaagtcaagatc
cgcgatgccttgaagcacatcttgaacatttctcgccatggtaaccaatacattcaagtc
aatgagccctggaagaaaataaagggaggagagtcagaaaggcagcgcgccggcaccgtg
acgggcgtttctgtgaatatcgcctgcttgctgtcggtgatgctcctgccttacatgcca
gcggtcagccagaccatcagggatcagctcaacgctcctcagacttgcatcaataccatg
ttgcaaggccccggcaccttcgtgtgcgccctgagagcgggccaccgcatcggcaccgtc
agtccgttattccagaaactggaggcggatcagatcgaggctttgaagaagaggtttggt
ggacagcagcctgaagacgaaccatctaataagaagattactgctagcactcagcccgct
gcagttcctgctcctcccgttgttgcagaggtgaaggtggtcgacggatcggatcccgag
aaagccaagcagctggcggaagctgtagccgaacagggcgacaaggttcgagcgcttaaa
tcccagaaagcagaaaaggctataatcacagcagaggtttccaaacttttagaccttaag
aaacaactggctcttgctgaagggaagagccctgagcctgcacctcagaagggtaagaaa
aagtga
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