Xiphophorus hellerii (green swordtail): 116710457
Help
Entry
116710457 CDS
T07363
Symbol
arhgef10l
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116710457 (arhgef10l)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116710457 (arhgef10l)
Membrane trafficking [BR:
xhe04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116710457 (arhgef10l)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116710457 (arhgef10l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
SOS1_NGEF_PH
IQ_SEC7_PH
CFAP43_N
RHG20_PH
WD40_CDC20-Fz
DUF7675
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
116710457
NCBI-ProteinID:
XP_032405376
LinkDB
All DBs
Position
20:complement(8405701..8533821)
Genome browser
AA seq
1289 aa
AA seq
DB search
MSSAISHQPPKDDEEEDDEEQGEEFMFDDSTDEEKAQEDVTSECITPVCVPKNDNNEASG
AVATDCTQHFKHPSPAGPESIVASIPTTDVPAAESPNEVSAAPAAAEPSASDRCLGEELP
VVPLSDSGDPSKETVQQSSDSRDISEEAGAPEASLEVIYDDVPSEEPLSPDEADMIYEDV
QRESGPLEANNGWSSSEFESYDEQSDNDAKLPARSKLSPEVDRLRERCARTKRELAMRLS
GKHNYDIKVQQLMRAARTGTKDGLERTKIAVMRKVSFLQRKDQMESSEVSSYFREEEDDA
GYLDVAVSEVKHPPPQLSPMPEGLTNHQVVRRHILGSIIQSERSYLESLRRILQEYHRPL
METEPRILSPRKIRPIFHRIREITQCHSMFQIALASRVAEWDSSEKIGDLFVASFSKSMV
LDVYSDYVNNFTNAMALIKKACMSKPAFLEFLKRKQASSVDRITLYGLMVKPIQRFPQFI
LLLQDMLKNTPKGHVDRLPLQLALTELETLAEKLNEQKRVADQIAETQQLARSVSDRLLS
KQLNSEQRSLVLCETLIETVYGERGQVLKSKERKVFLFDDVLICANINVKGPPDISSLVP
VGPKYTMKWSAPLQHVQVVEVGQENSQSKDTLFQQSGTKRPSGACNSGKALLGPPRLYQE
LQELQHDLSVVEEVTLLVGTLQGIYQNLNTTVSQDWCLALQRLIRIKEEQIQCANKCRLR
LQVPGRPDKSGRPVSFMVVFNTPNPLSKISWVNRLHLTKIALREENSRGWLYGEDDGKTI
VPFSCPLLACHMPVYATKSAERKLETALHNPVNCALLGFSAASTSLPQGYLWVAGADEGS
QGHIEIFSLNRPTPRAVKSLQISSAIRCLEYVQAPSPTEEEDVGIHKATAGTGTNICVGL
DDGRILVYGSADTAAQCLLTLHNPEGCPVLCLKHSARFLFAGLRNGTVMVYGRNNNGEVL
DDLWETESPICVSLGAEPIRTLLVLDESVWASCGNSVTVIQISTLTTQKFEVHPNPMISV
THMACAGGGVWMAFSEGSSIRLFHTETLELLQEINISTRSMLQNTGQKNMRVTSLLICQG
LLWVGTAQGLIITLPVPKLEGIPKITGKGMISLNAHCGPVDFLVATTSTLSPDLLKRDSV
GDGPDSACGGEDRSDSSSQESLQPSSCYKAEEKGKGRGVLLQYRLRSTSGLPGRPLTAHG
DEASDSSLESLEHSVEDGSIYELSDDPEMWVRGRPCEKDAVRRDRVISAAVISGGKGFRR
LKEGVGIGSRTSGDSLENTLMVWQLPLTV
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgcgatatctcaccaaccaccaaaagatgatgaagaggaggatgatgaagag
caaggggaagagtttatgtttgatgacagcacagatgaggaaaaagctcaggaagacgtc
acctcggaatgtattacacctgtctgtgtgccaaaaaatgacaacaacgaggcatcaggt
gctgtagctacagactgcacacagcattttaaacatccatctcctgctggaccagagagc
attgtggcttcaattcccaccactgatgttccagccgctgagtcaccaaacgaggtctca
gcagcaccagcagcagccgagcccagtgcatcagatcgttgtttgggagaggagcttcct
gtggtgccgctgtctgattcaggagatcccagcaaagaaactgttcagcaaagctctgac
tcgagggacatctctgaagaagcaggagcaccagaggcttcgttagaggtgatctatgat
gacgttcccagcgaggaacctctctcccctgatgaagcagacatgatctatgaagatgtc
caaagagagagtggtcctttggaggcaaacaacgggtggagctccagtgagtttgagagc
tatgatgagcaatctgataacgacgccaagctgccggcaaggagcaagctctcacctgaa
gtggatcggctgagggagcggtgtgccaggaccaaacgtgaactggctatgaggctgtct
ggaaagcacaactatgacatcaaggttcagcagctcatgagggcggcaagaaccggaacg
aaggatggactcgagaggaccaaaatagccgtcatgagaaaagtgtcattcctgcagaga
aaagatcaaatggagagttcagaagtttcttcatattttagagaggaggaggatgatgct
ggatacctggatgtggctgtgtcagaagtgaagcatcctcccccgcaactgagccccatg
ccagaagggttgaccaaccaccaggttgtcaggcgccatatccttggctccatcattcag
agcgagcggagctacctggaatctctcaggaggatcttgcaggagtaccatagaccattg
atggagacagagccgcgcatactgagtccaaggaagatccggcccattttccaccgaatc
agagagatcacacagtgtcactccatgttccagattgcgctggcttcccgtgtggcagag
tgggacagcagtgagaaaatcggggacttgtttgttgcctcgttttctaagtccatggtg
ctggatgtgtacagtgattatgtgaacaacttcaccaatgcaatggctctcattaaaaag
gcatgcatgtccaaaccggcattcttggaatttctaaagaggaaacaggcctctagtgtg
gaccggataactctgtatggactgatggtgaagcccattcagcgattcccccagttcatt
ctcctcttgcaggacatgcttaagaatacaccaaagggccacgtggatcgtcttcccctg
cagcttgcactgacagagctggagacgctggctgagaagctgaatgaacagaaacgagta
gctgaccagattgcagagactcaacaactcgcccgcagcgtcagtgatcgcctgctcagt
aagcaactgaactcagaacagaggtcactggtcctttgtgaaacacttattgagactgtg
tatggtgagcggggacaagttctgaagtcgaaggagaggaaggtcttcctttttgatgat
gtgctcatctgtgccaacataaatgtcaaaggacctccggatattagcagcctcgtccct
gttggccccaagtacaccatgaagtggagcgccccccttcagcatgtgcaagtagtagag
gttggccaggaaaactctcaaagcaaagacaccttgtttcagcagagtgggactaagagg
ccaagtggggcctgcaattcaggaaaagctctcttgggccctccacggttgtaccaggag
ctgcaggaacttcaacatgacctttcagttgtggaagaggttactctgcttgtgggcaca
ctacaggggatataccagaacctaaacaccaccgtgtcccaggactggtgtctggctctg
cagaggcttattcgcatcaaagaagaacaaatccagtgtgctaacaagtgtcgcttacgc
ctgcaggtgcctggcaggccagacaagtctggccgtccagttagtttcatggtggtcttc
aacacccccaaccctcttagtaagatctcctgggtcaaccgactgcacttgaccaagatt
gcactaagagaggaaaattctcgaggttggctatatggagaagatgatgggaaaacaata
gtaccattttcctgtccactgcttgcctgtcacatgcctgtctatgctacaaaatcagca
gaaagaaagcttgaaactgctcttcacaaccctgttaactgtgcattgttgggcttttct
gcagcaagtacctctttacctcaaggctacctctgggtggctggtgcagatgaaggttct
cagggccacatagagattttttccctcaacaggcctaccccacgggctgtgaagagccta
cagatcagttctgcgattcgatgcttggagtatgtgcaggcgccttcaccaacagaggag
gaagatgtgggcattcataaggccactgcagggaccggtaccaacatttgtgttggatta
gatgatggccgcattctggtctatgggagcgcggacaccgcagcacaatgcctattgacc
ctccacaacccagagggctgccctgtgctgtgcctgaagcattccgctcgcttcctgttt
gcgggtttgcggaatggtacagtgatggtttatggaagaaataacaatggtgaggttctt
gatgacctctgggaaactgaatctccaatatgtgttagcctgggagcagagccaattcgg
actttgctggtgctggatgaatctgtgtgggcaagctgtgggaactctgtcacagtcata
caaatatctacccttacaactcagaaatttgaagtccatccaaacccaatgatcagcgtt
acacatatggcctgtgctggtggaggagtgtggatggccttctcagagggctcctccatt
cgtctctttcatacagaaacactggagcttctgcaggaaatcaacatttcaacacgttca
atgctgcagaacactggtcaaaagaacatgcgggtgacaagtcttctaatttgccaaggg
ttgttatgggtgggaacagcccaaggtttaatcatcactcttccagttcctaaactggag
ggcatccccaaaataacaggaaagggaatgatctctctaaatgctcattgtggacctgtg
gactttcttgtggcaaccaccagcactttgtctcctgatctgctcaagagagattctgtt
ggggacggaccagactctgcctgtggaggtgaagaccgaagtgactcctcctcacaggaa
tccttgcaaccttccagttgctacaaagcagaagagaaaggaaaaggacggggcgttctg
ctacagtacaggctgcgctccacatcaggactaccgggacggccgctgacagctcacggg
gacgaggcctccgactcgtccctggagtctttggagcacagtgtggaggatggatctatc
tacgaactcagcgatgacccagaaatgtgggttcgaggacgtccatgcgagaaggacgca
gtgcgtagggacagggtgatatctgctgcagtcatatcaggaggaaaaggttttcgcaga
ctgaaggaaggagtagggataggttctaggacaagtggagactctttagaaaatactctt
atggtatggcaactcccattgactgtgtaa
DBGET
integrated database retrieval system
