Xiphophorus hellerii (green swordtail): 116710461
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Entry
116710461 CDS
T07363
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116710461
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
116710461
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF5365
Motif
Other DBs
NCBI-GeneID:
116710461
NCBI-ProteinID:
XP_032405396
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Position
20:complement(19898048..19901569)
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AA seq
428 aa
AA seq
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MERVPSEQPPPLSKHQPDLSDVQGMDFQMYVYKPRRGIKRGEESKDTYKLPHRLIEKKRR
DRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTSLLEQQQQKILSLQSGM
QIEQPTVSQEKSEEMFRSGFHMCAKEILQYLANHEADGDLTPTHLIGHLHKLAAEVLQSP
ARPCTPHSPQPEEVPAYHQRQPHKEMASTLPPKPTEGYGRNCVPVIQRAYAPASGEQSGS
DTDTDSGYGGELEKTEVGALQGRSDYYGHDSQQKRPLGDRQSSAIKQEDDEPRHKRPRVE
SSEDEVLSSGESSISSSSSGYGSYMSTSPTHPPPPPHPLCMPFYLIPPSAAAYLPMLEKC
WYPGAVPMLYPGMGGSSPTMSGDRPPPPLVLSPRGGSPAPALSQTPMDSPALLQALKQVP
PLNLETKE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagtcccgagcgagcaaccgcctcctctctccaaacaccagcctgatctgtca
gacgtgcaagggatggatttccaaatgtatgtttataagcctagaagagggataaaaagg
ggagaagagagcaaggacacctacaagctgccccacagactcatcgagaagaaaaggcgc
gatcggataaacgaatgcatcgctcagctgaaagatttattacccgaacatctgaaactc
acaactctgggccatctggagaaggctgtggttttagagctcacgctcaaacatgtgaaa
gccctcacctctcttctggagcagcagcagcagaagatcctttctctgcagagtggcatg
caaatcgagcaacccactgttagccaggagaagtcagaggagatgtttcgctctggtttc
cacatgtgtgccaaggagattctccagtatctagccaatcatgaggctgatggagacctg
actccaactcatctcatcggccatcttcacaaactggctgctgaagtgctgcagagtccg
gctagaccttgcacccctcacagcccccaacccgaagaggttccggcctaccaccagcgc
cagcctcacaaggagatggcctccaccttgccccctaagcccactgagggctatgggagg
aactgcgtgccagttatccagcgggcatacgcaccagcgagtggcgagcagagtggaagt
gacacagacacagacagtggctatgggggggagctggagaagactgaagtgggggcactg
cagggacgctctgattattatggtcatgacagccagcagaagcgaccgctgggagacagg
cagagctctgccatcaagcaggaggacgatgagccgcgccacaagcgaccccgtgtggag
tcttctgaggatgaggtgctctcaagtggagagtcatcgatttcatcatcctccagtggt
tatggtagttacatgagcacgtcccccacccacccacctccccctcctcatcctctctgc
atgccgttctacctcatccccccttcagctgcagcctacctaccaatgctggagaaatgc
tggtatcctggagcagtgcctatgctctaccccggcatgggaggctcctcacccactatg
tctggcgacagaccaccacctccgcttgtgttgtctcccagaggaggctctcctgcccca
gccctatctcagacccccatggactcccctgctctccttcaggcactaaagcaggtacca
cccctcaacctggaaaccaaagaatga
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