Xiphophorus hellerii (green swordtail): 116710476
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Entry
116710476 CDS
T07363
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116710476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116710476
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116710476
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
116710476
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116710476
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116710476
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_21
PH_11
BAR
TPR_TTI1_N
PH_8
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
116710476
NCBI-ProteinID:
XP_032405435
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Position
20:22647407..22705452
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AA seq
852 aa
AA seq
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MTVDFEECIKDSPRFRAGIDDVETDVVEIEAKLDKLVKLCSGMIEAGRVYVSANKLFVNG
IRDLSHQCKKEEMISECLEKCGESLQEIVNYQTILFDQAQRSIKQQLHTFIKEDIRKFKD
TKKQFDRVREDMELAQVKNAQAPRNKVHEAEEATQALILSRKAFRHLALDYVLQINVLQA
KKKFEILDAMLSFMQAQYTLFRQGFNILDEIDPYMKKLAAQLDQLVIDSAMEKRELEHKH
ALIQQRTLMQDFSYDDPKLEFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVY
QKKLKDSLTVVVEDLRLCSVKPCEDNERRFCFEVVSPTKSCMMQAESEKLRQAWIQAVQA
SIASAYKDIGDNYYIERLDRTASPSTSSIDSASEPRDRGERADKACRGGGESLLQRVQSL
PGNELCSDCSQAAPCWASINLGVLLCIECSGIHRSLGVHFSKVRSLTLDSWEPELLKLMC
ELGNTVINNIYEGACEELGVKKPGPSSSRQEKEAWIKFKYVEKRFLKKLSGSEALVEGER
KSRPWMVKKCQRHSSSVRAPNKARRKYHRYEPGSASPANLTAAAAAKFRRDSLFCPDELD
SLFSYFDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVTEEAEEESEESSSGEVEIEQ
EGSSDPEDPRELHPGAMLYRSSRLHNLPLMAEALAHGADVHATNEEEEGKTALIQAVVGG
SLIACEFLLQNGADVNQRDMRGRGPLHHATYMGHTGQVCLFLKRGASQTEVDEQGNDPLS
IAVQAANADIVTLLRLARMNEEMREAEAPLGQPGVSTGSRKDKHKDVRDRVTSPVLMSFA
SFLSSRLSSPRS
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtataaaagattcgcccagattcagggccggaatcgat
gatgtggagacagacgtggtggaaatcgaggcaaagcttgacaagctggtgaagctgtgc
agcgggatgatcgaggccggcagggtttatgtcagcgccaataaactctttgtgaatggc
atcagagatctgtcccaccagtgcaagaaggaggagatgatatcggaatgccttgaaaag
tgtggagaaagcctccaggagattgtcaactatcaaacgattttgtttgaccaggctcag
aggtcgatcaaacagcagcttcataccttcattaaggaggacatccgtaagttcaaggac
accaagaagcagtttgaccgcgtgcgcgaggacatggagctggctcaagtgaagaacgct
caggcaccgaggaacaaggtgcacgaagcagaggaggccacacaggcgctcatcctcagc
cgcaaagccttcaggcaccttgccctggactatgtgctgcagattaatgtccttcaagct
aagaagaagtttgaaatccttgatgcaatgctgtccttcatgcaagcccagtatactttg
ttcaggcaaggcttcaacattttagatgagattgacccctacatgaaaaagctggctgca
cagttggaccagctggtgatcgactctgccatggagaagagggagctggagcacaaacat
gctctcatccagcagaggactttgatgcaggatttttcctacgatgatcccaagcttgaa
ttcaatgtggacgcacccaatggggtcgtcatggagggctatctgttcaagagagccagc
aatgctttcaaaacttggaacagacggtggttttcaatccaaaacagccagctggtctac
caaaaaaaactcaaggattctctgacggtggtggttgaggatctgaggctgtgctcagtc
aaaccatgtgaagataatgagaggagattctgctttgaggtggtttcgcccacaaagagc
tgcatgatgcaagcagagtctgagaagctgcggcaggcttggatccaggcggtccaggca
agcatcgcttctgcttacaaagacatcggcgacaactattacattgagcgtttggaccgg
acggcttcaccgtccaccagcagcatcgactctgccagcgagccccgagacaggggggag
agggcggacaaggcgtgccggggcggcggagagtctctcctgcagcgggtgcagagcctg
ccgggcaacgagctgtgcagcgactgcagccaggcggcgccatgctgggcttcaatcaac
ctgggcgtgctgctttgcatcgagtgctcggggatccacaggagtttaggcgtccatttc
tctaaagtgcgctcgctgacgctggactcgtgggagccagaattactcaagctcatgtgt
gagttgggaaacactgtgatcaacaacatttacgagggagcctgcgaggaactgggagtt
aaaaaaccgggaccgtctagctcgaggcaggagaaagaggcctggatcaagtttaaatat
gttgagaaacgcttcctgaagaagctgagtgggagtgaggcactggtggaaggcgagagg
aagtcccgcccctggatggtgaagaaatgccagcggcacagcagctctgtgcgggccccc
aacaaggcgcgcaggaagtaccaccgctacgagcctggcagcgcctcacccgccaacctc
acagcagccgctgcagcaaaatttcgacgggactccttgttctgcccagacgagctggac
tcactgttttcctactttgacaccggctctggtcctcgcagccctgcaggtctcagcagc
gacagcggcctgggaggaagcacagacggcagcaccgacatccttgtgtttggcagtgtg
acggaggaagcagaagaggagtcggaggagtcctccagtggggaagtggagatcgaacag
gaggggtcttcggatcccgaggatcccagggagttgcatcctggggcgatgctctatcgc
tcctctcgtctccacaatttgcccctcatggcagaggcactggcgcacggtgctgatgtg
cacgctaccaacgaagaagaggagggaaaaacagctctcatacaggctgtggtcggggga
tctttgatcgcttgtgagttcttgctacagaacggagctgatgtgaaccagagagacatg
agaggcaggggcccgcttcaccacgctacctacatgggccacaccggacaggtgtgtttg
tttctgaagagaggagcatcgcagacggaagtggacgagcagggtaatgaccccctcagc
atcgctgttcaggctgccaacgcagacatcgtcacgctgttgcgactggcgcggatgaac
gaggagatgcgcgaggcggaggctccactgggtcaaccaggggtttccacaggcagcagg
aaagataaacacaaggacgttcgggatagagtgacatctccagtgctgatgtctttcgcg
agttttctgtcctcgcgtctctccagcccgagaagctga
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