Xiphophorus hellerii (green swordtail): 116710478
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Entry
116710478 CDS
T07363
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116710478
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR_2
Motif
Other DBs
NCBI-GeneID:
116710478
NCBI-ProteinID:
XP_032405441
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Position
20:22083476..22111149
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AA seq
808 aa
AA seq
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MIVCILALGLFSSALGRHLQDGSDLPRVRRLRGEPGDAEERRSVERRELSRRSAGLNEQT
CTALRGVESALQNSTSTYTFKVRSMGSLSLAWVGDGSGVLLVLTTFQVPLFLMRFGQSNL
YRSEDYGKTFKDVTNVINHTFIQTEFGIAVSPDHSGKVILTGDVSEFGGFRLFCSRDFGL
TFEPTDLPFVPLIQMLYNPGDSNTLLTLSITLDLWLSDNFGSTWRKIHNSVCLVRWGPRN
SIYITTNTNGSCNDKGMLDLKKTMDYGKTFHTIASRVYSFVLGGKFVFSSIMTGMGTERV
IHVSVDGGDHWNIAQLPAVDHQQFYSILAANQDMIFMHVDDPGDSGVGTIYVSDDRGAVF
SKSLERHLYTTTGSDTDFTAISSLRGVYMTSILTEDGNIETVITYDQGAKWQPLRRPQNT
DCDAETSTNRPSRCKLHIYASYSTAMKMNVPVLPLSQSNAVGLILAHGNVGDSESVLAPD
VYVSDDGGYSWLQALKGPHHYAILDSGGLLVAVEHTNSPINQIKFSTDEGQCWHTYNFTS
DPLHFSGMDSEPGSRSMNVSLWGYRNDYTKWVAITIDFRKLLSRDCNEGDYEEWLAHSAD
PSGSNDGCVMGFRETFLRLRKDSVCWNGRDFAITKKHLPCPCSAADYHCDFGYYRPENKS
ECVEQKELVGHALEFCLNGTTEQLQTSGYRKIPGNQCEGGFQPERKETDLRRLCISDALH
SKSLTDSSSPSAAVIVMVVMAILLVSVLTGAWLVKKYVCGGRFLVHRYSVMREHVEANKI
EGVDDVDTNYMETEKTQFNDDSDQDLLE
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtctgcattttggcgctcgggttgttttcgtctgcgctgggcagacatctgcag
gatggaagcgacttgccccgggtcaggaggctgcgtggagagcccggggatgctgaggag
cgacgtagcgtggagaggagggagctgtcgaggcgcagcgctggactgaatgagcagaca
tgcacggctttgcgtggagtggaatccgcgctgcaaaacagcaccagcacttatacgttc
aaagtgcgctcaatgggctcactctcgcttgcctgggtgggagacggatcaggggtgctc
ttggtcctgacgacgtttcaggtgccgttgttcttaatgcgatttggccagtctaatctc
tacaggagtgaagactacgggaagacgttcaaagacgtgactaatgtgatcaaccacact
ttcatccagacagagtttggcatcgccgtcagtccggatcattcaggaaaggtgatcctc
actggcgatgtgtctgagttcggtggatttcgacttttttgctcgcgggactttggtctg
acctttgaaccgacggacctgccgtttgtgcccctcattcagatgctgtacaaccccggg
gacagcaacacacttctgacactcagtatcacgctggatctgtggctgtctgataacttt
ggctccacctggaggaaaatacacaacagtgtgtgtttggtcagatggggtccaagaaac
agcatctacataacaaccaacaccaatggatcatgcaatgacaaagggatgctagattta
aagaaaacaatggactacggcaaaacgtttcacacaattgcatccagagtttactccttt
gtccttggaggaaaatttgtcttttcgtccatcatgaccgggatgggtacagagcgtgtg
atccatgtctctgtagacggcggggatcactggaacattgctcagcttcctgctgttgac
catcagcagttttactccatcctcgcagccaatcaggacatgatcttcatgcacgtggat
gaccccggagactcaggtgttggaaccatctacgtgtcggatgacagaggagctgtcttc
tccaagtcactggagcgccatctctacacaaccacaggaagcgacacagacttcaccgcc
atttcttccctgcggggcgtctacatgaccagcatactcacagaggacggtaacatagag
acagtgatcacgtatgaccaaggagccaagtggcagccactgcgcagaccccagaacacc
gactgcgatgctgagacctccaccaacagaccaagcagatgcaagcttcacatatatgcc
tcgtacagcacagccatgaagatgaacgttcccgtgctgccgctctcgcagtccaacgcg
gtgggtctcatcctggctcacggcaatgttggagactcggagtctgttcttgctcctgac
gtgtacgtgtctgatgatgggggctactcatggctgcaggctctgaagggtccccatcat
tatgcgatcctggactctggaggactgctggttgctgtggagcacaccaactcacctatc
aaccagataaagttctccacagatgaaggccaatgctggcatacgtataacttcaccagc
gacccgctgcacttcagcggcatggacagcgagcctggctctcgctccatgaatgtaagc
ctgtggggctacaggaacgactacaccaaatgggtggcgatcaccatagactttaggaag
ctcctctccagggactgcaatgaaggggactatgaagagtggctggctcactctgcagac
cccagtggctcgaatgacggctgcgtgatgggcttcagagagaccttcctacgcctgagg
aaagattcagtgtgctggaatggaagagacttcgccattaccaagaagcacttgccttgt
ccgtgctcagcggcagattaccattgtgacttcggttactaccggccggagaacaagtcg
gagtgtgtggagcagaaggagctggtgggccacgctctggagttctgtttgaatgggacg
actgagcagctgcagaccagtggataccggaagattcctgggaaccagtgtgaaggaggt
tttcagccggagagaaaggagaccgacttaaggaggttgtgcatcagtgacgcccttcat
tccaaatctctgactgacagcagttcacctagcgctgctgtcatagtgatggttgtcatg
gcgatactcctggtgagtgttctcacaggtgcctggctagtgaagaagtacgtctgtggt
ggacggttcctcgttcaccgatactctgtgatgagggaacacgtggaagcaaacaaaatc
gagggagtagatgatgtcgacaccaactacatggagacagaaaaaacacagttcaacgat
gattcagatcaagatctcttggaataa
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