Xiphophorus hellerii (green swordtail): 116710531
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Entry
116710531 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: mucin-5B-like
KO
K22023
mucin-6/19
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116710531
Membrane trafficking [BR:
xhe04131
]
Others
Mucins
Secretory mucins
116710531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
Mucin2_WxxW
C8
TIL
VWF
VWC
Motif
Other DBs
NCBI-GeneID:
116710531
NCBI-ProteinID:
XP_032405519
LinkDB
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Position
2:7602528..7616814
Genome browser
AA seq
2326 aa
AA seq
DB search
MRGVRLLLEWALPWLILSLGLSAVSSVQVHKVGEMAVIKEVRGSHINQFCSTWGNFLYKT
FDGAFFHLPSTCNYIFTSQCKGSYESFNIQLQRQEVDGEVSITRILLKLNGIVVEFANTS
VMVMNKPVSIPFSEGGISIEETMSYIKVEAKLGLTFMWNQMDSVWVELDAKFKNQTCGLC
GDFNEIKLSDEFVQSEVSISPEEYAMNWKVDSPTETCKVVSSQANNNCSDGNKRCKKLLS
GPEFKSCRKLIDSESFMKACVEDFCYCNSNSSSCLCSTVSEYARQCAHAGGHPKQWKTKQ
LCEKTCPFNMEYKECGSPCIDTCKYRQKSQLCDEHCIDGCFCPSGTILDDISESGCVPVE
QCPCFHEGETYNTGESIIMPCKNCTCSKGEWSCIDANCPAVCSIRGGSHFSTYDYKTYNF
HGKCSYILSKIEDNAFTVLGDFDKCERSEKSTCLSAVTLLYQNHTIIEVKDKNEVSYNQR
IFELPFFLDDIKIFRPSTFFTIIHTNFGLDLEIQVVPIMQLYIRADVSLKSKVMGLCGDF
NDNSADDFKTTSGLPERTPEAFANTWRTKLNCPDVKNDLADPCTLSIDKNTYAKTWCSLL
TDTTGIFSHCHSKIDPEEYYATCLYDTCACENSEECMCATLSSYVHACAAEGVFLKGWRT
DVCNKYTTCPSTFVYNYKMTHCGRTCRSLSQSDVTCKVKVTPVDGCGCAKGSFLNEKGVC
VSASECSCYAGNKVIQPGEKADVQGQTCTCHAGKLSCKGEPVAETCTSPMVFFDCSNSKA
HLKEKGSECQRSCVTMDSECVSSQCVSGCVCPDGLLSNGKGGCVKEEDCPCPHDGKYYNP
EEKIKVDCNTCTCKNRKWECTENDCGATCTIYGEGHYTTFDKKKFVFKGDCGYIFSQDYC
GDDVNGTFRVRTENIPCIESGSICSTSIKLYLGRKEIVLSDESVKVISQSNGIDIPFKVH
TMGIYVVIEANNGLLLIWNKKTTIMIKLSSTFKGKVCGLCGNYDGAIKNDFTTRSNAVVV
NPTEFGNSWKLSSSCSDVNTTLNPCALYSNRRAWAEKHCSIIKSEVFSACHGKVEPEQYY
EACVADTCACNTGGDCECFCSAVGAYAEVCNEAGACVKWRTPTICPLFCDYYNPDGECEW
HYAPCGKPCMKTCRNPSGKCYNKLPPLEGCYPSCPWEQPYFDEVSMKCVCEKECGCYDED
GNHYKDGESIPASENCHKCSCSSTQPRCIYDVNACTCVYMNNTYKYDTTVYETHDGDGTC
ISGVCGPNGTIIGKMAPCIHTSTTPFTFTTTASTTEQPVTTTKPVPTVTTQAVTSILTFS
TTRVSTSSKTTTVSLSSLNPSSTTSTVTESPTTEIVSTTIPYIETTSTEKPTTTNIITQK
STTPYTETTTKFTEVSTTPYTETPTPTIETEKSTVTTAQIESTTTNPEISTTAPSDCYIC
KWSNWINNDYPGHNRDGDYETLEKISDPDLSVCRKPLEIQCRANFFKDVPLEDLNQNVIC
SPTDGLICRNKDQTPPKCYDYEIRVKCCTYICGTSTTTIHTGKTTPTIETEKSTPIITPK
PTTPHIETTTTGTQTPEITNIITEIFSTTTIHAETTTPTIETEKSTPIITPKPTTPHIET
TTTGTQTPEITNIITEIFSTTTIHAETTTPTIETEKSTVPETSTTAPSDCYICKWSNWIN
NDYPGHDRDGDYETLEKISDPDLSVCRKPLEIQCRSNFFKDVPLEDLNQNVTCSPTDGLI
CRNKDQTPPKCYDYEIRVKCCTYICGTSTTTIHTGKTTPTIETEKSTPIITSKPTTPHTE
TTTTGTQTSETTNIITGTVSTTTIHVETTTPTIETEKSTPIITSKPTTPHTETTTTGTQT
SETTNIITGTVSTTTIHVETTTPTIETEKSTPIITSKPTTPHIETTTTGTQTSETTNIIT
ETVSTTTIHAETTTPTIETEKSTPIITPKPTTPHTETTTTGTQTPETTNIITETVPTTHY
KETPTSTIETERTTTMFKETSTTPHLVTGTHSTEKPSTAHIITGIKTTTTIPAETTTPTI
ETEKSTPKITSKPTTPHTETTTTGTQTSETTNIITGTVSTTTIHVETTTPTIETEKSTPI
ITSKPTTPHTETTTAGTQTPEITNIITEIFSTTTIHAETTTPTIETEKSTPIITPKPTTP
HIETTTTGTQTPEITNIITEIFSTTTIHAETTTPTIETEKSTVPETSTTAPSDCYICKWS
KWINNDYPGHDRDGDYETLEKISDPDLSVCRKPLEIQCRSNFFKDVPLEDLNQNVTCSPT
DGLICRNKDQTPPKCYDYEIRVKCCTYICGPSTTTIHEQSPQQQFM
NT seq
6981 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagtcaggctccttttagaatgggcgctaccatggctcattctaagtcttgga
ctatctgcagtctcctctgtacaagttcataaagtgggagaaatggcagtgattaaagaa
gtgagaggttcccacatcaaccagttctgcagcacatgggggaacttcctttacaagact
tttgatggggctttcttccaccttccctccacctgtaactacatctttacatcccagtgt
aagggcagctatgagagtttcaatattcagctccagcgacaggaagtggacggggaagtc
tccatcaccagaattctgctgaaactgaatgggattgtggtggagtttgccaacacttcg
gttatggtcatgaataaacctgtctccataccattcagtgagggtggcatttcaattgag
gaaaccatgtcctatattaaagttgaggctaagttgggactgacattcatgtggaatcaa
atggactctgtctgggtggagctggatgccaaattcaagaatcaaacttgcggcctgtgt
ggagacttcaatgaaatcaagctttctgatgagtttgtccagtcagaggtttccataagt
cctgaagaatatgcgatgaactggaaagttgatagtcccactgaaacttgcaaagtggtt
tcttcccaggctaacaacaattgctcagatgggaacaaacgctgcaagaagttgctgtca
ggacctgaatttaaaagctgtcgcaaactaattgactctgagtccttcatgaaagcctgt
gtggaagacttctgttactgcaacagcaacagcagttcatgcttatgttcgactgtgtct
gagtacgcccgacagtgcgcccatgcaggtggacacccaaagcagtggaagacaaaacaa
ttgtgtgaaaaaacatgccctttcaacatggagtataaggagtgtggtagtccctgcatt
gatacctgcaaataccggcagaaaagtcagctgtgtgatgagcactgcatcgacggatgc
ttctgtccttctggtacaatccttgatgatatctcagaaagtggatgtgttcctgttgag
cagtgcccatgtttccacgaaggcgagacgtataatactggggaatcaatcataatgccc
tgtaaaaactgcacctgttcaaagggcgagtggagctgtatagatgcaaactgtcctgct
gtctgttccatcagaggaggctctcacttctccacctatgattataagacatacaatttc
catggaaaatgttcctatattttgtccaagattgaagacaatgcttttactgtgcttggt
gatttcgacaaatgtgaaagatctgaaaaatcaacttgtctgtctgccgtcactctgctg
tatcaaaatcacacgataattgaagttaaagacaaaaatgaagtctcatataaccaacgg
atctttgaacttccttttttcctggatgacattaaaatcttccgtccttctacattcttt
accataatccacacaaactttgggcttgatctcgagattcaggtcgtaccaattatgcag
ctctacatcagagccgatgtctcattgaagagtaaagttatgggtctttgtggagatttc
aatgataactcagcagatgacttcaaaactacaagtggacttcctgaaagaacaccagag
gcatttgccaacacatggcgaaccaaattaaattgtccagatgtgaaaaatgaccttgca
gacccctgcactttaagcattgacaagaacacatatgcaaaaacctggtgctccctcctg
acagacacaacagggattttttcacattgccattctaaaatagacccagaagagtactat
gctacttgcctttatgacacttgtgcctgtgaaaacagcgaggagtgcatgtgtgccacc
ttgtcctcatatgtccatgcatgtgctgctgaaggtgtattcctgaaaggctggagaaca
gatgtttgcaacaaatacacaacatgcccttcgacatttgtgtacaattacaaaatgaca
cactgcggtcgaacttgccgctctctgagtcagtcggacgtgacttgcaaggttaaggtt
acccccgttgacggctgtggttgtgctaaaggatcttttctaaatgagaaaggagtttgt
gtgtcagcttcagagtgctcctgttatgcaggaaacaaagtgatacaacctggggagaag
gccgatgtccaaggacaaacatgcacctgccacgctggaaaattaagttgtaaaggagag
ccagtagctgagacatgcaccagtcccatggttttcttcgattgctccaactccaaagca
cacttaaaggaaaaggggtcagagtgccagaggagctgcgtcacaatggactctgaatgt
gtgagttcacagtgcgtctcagggtgtgtgtgtcctgatggcctgctatcaaatgggaaa
ggagggtgtgtaaaggaggaagactgtccttgcccccatgatggaaaatactataaccca
gaagaaaaaatcaaagtggactgtaatacatgcacatgcaaaaacaggaaatgggaatgc
acagaaaatgactgtggtgcgacctgcaccatatatggagaggggcattatactactttt
gataaaaagaaatttgtctttaagggggattgtggctacatcttctctcaggattattgt
ggagacgatgtgaatggtacctttagggtccggaccgaaaacatcccatgtattgaaagt
ggaagcatttgctccacgagtattaaactctacttggggaggaaagaaattgttctgtca
gacgaaagtgtcaaagttatcagtcaaagcaacgggattgacataccttttaaagtccac
actatgggtatatatgtcgtcattgaggcaaataatggccttcttctaatctggaataag
aaaacaacaatcatgatcaaactcagctccacattcaagggcaaagtttgtggcctgtgt
ggaaattatgatggggctatcaagaatgatttcactactagaagcaacgcagttgtagtt
aatccaacagagtttggaaacagttggaaactgtcatcctcctgctcagatgtaaacacc
acactgaacccgtgtgctctgtactctaacagacgtgcatgggcagagaaacactgcagc
attatcaaaagtgaagtgttttctgcctgccatggcaaggtggagccagaacagtactat
gaggcttgtgtggcagatacgtgtgcctgcaacacgggaggagattgtgagtgtttctgc
tcagctgtaggagcatatgcagaagtatgtaatgaggctggagcctgcgtgaagtggaga
acccccaccatatgccctctgttctgtgactattacaaccctgatggagagtgtgagtgg
cactacgctccatgtggaaaaccatgcatgaagacatgtaggaatccttcagggaaatgt
tacaataaacttccaccactggaagggtgttatccatcatgcccgtgggagcagccttat
tttgatgaagttagcatgaagtgtgtgtgtgagaaagagtgcggctgctatgatgaagac
ggaaaccattataaagatggagagtcaatacctgcaagtgaaaattgtcacaagtgttct
tgctcttcaacacagccgagatgtatttatgatgtgaatgcttgtacctgtgtctacatg
aataacacctacaaatatgacactacagtctatgaaacacatgatggagatggaacctgc
atctctggtgtttgtggaccaaatggaaccattataggaaaaatggcaccatgtatacat
acatcaacaacaccttttacatttactacgactgcaagtactacagagcagcctgtaact
acaactaaacctgttcctacagtcacaactcaggcagtaacatcaattctgactttttca
actacaagagtttccacaagttctaaaactacaacggtgtctttgtcatcgttaaatcca
tcttcaacaacctctacagtcactgaaagccccacaactgaaatagtatcaaccacaata
ccttacatagaaacaactagcactgaaaaacccacaactacaaacataattacacaaaaa
tctactacaccttatacagaaactacaaccaaatttacagaagtctccacaacaccttac
acagagactcctaccccaacaatagagactgaaaaatccacagtcacaacagctcaaatt
gaaagtactactaccaatcccgaaatatctactacagcacccagtgactgctatatttgc
aaatggtcaaattggattaacaatgactatcctggacacaatagagatggagattatgaa
acattagaaaagatttctgatccagatttgagtgtttgtagaaaaccactagaaattcag
tgtcgagccaatttttttaaagatgtgcctttagaagatttaaatcaaaatgtaatctgc
agccctacagatggactaatctgtcgtaataaggatcagacacctccaaaatgttatgat
tatgaaattcgggtaaaatgttgcacttacatatgtgggactagcacaacaacaattcat
acaggaaaaactaccccaacaatagagactgaaaaatccacaccaataattacaccaaaa
cctacaacacctcatatagaaactacaactactggcactcaaacacctgaaattacaaac
ataattacagaaatattctccacaacaacaattcatgcagaaacaactaccccaacaata
gagactgaaaaatccacaccaataattacaccaaaacctacaacacctcatatagaaact
acaactactggcactcaaacacctgaaattacaaacataattacagaaatattctccaca
acaacaattcatgcagaaacaactaccccaacaatagagactgaaaaatccacagtccca
gaaacatctactacagcacccagtgactgctatatttgcaaatggtcaaattggattaac
aatgactaccctggacacgatagagatggagattatgaaacattagaaaagatttctgat
ccagatttgagtgtttgtagaaaaccactagaaattcagtgtcgatccaatttttttaaa
gatgtgcctttagaagatttaaatcaaaatgtaacctgcagccctacggatggactaatc
tgtcgtaataaggatcagacacctccaaaatgttatgattatgaaattcgggtaaaatgt
tgcacttacatatgtgggactagcacaacaacaattcatacaggaaaaactaccccaaca
atagagactgaaaaatccacaccaataattacatcaaaacctacaacacctcatacagaa
actacaactactggcactcaaacatctgaaactacaaacataattacaggaacagtctcc
acaacaacaattcatgtagaaacaactaccccaacaatagagactgaaaaatccacacca
ataattacatcaaaacctacaacacctcatacagaaactacaactactggcactcaaaca
tctgaaaccacaaacataattacaggaacagtctccacaacaacaattcatgtagaaaca
actaccccaacaatagagactgaaaaatccacaccaataattacatcaaaacctacaaca
cctcatatagaaactacaactactggcactcaaacatctgaaactacaaacataattaca
gaaacagtctccacaacaacaattcatgcagaaacaactaccccaacaatagagactgaa
aaatccacaccaataattacaccaaaacctactacacctcatacagaaactacaactact
ggcactcaaacacctgaaactacaaacataattacagaaacagtccccacaacacattac
aaagagactcctacctcaacaatagagactgagagaaccacaacaatgtttaaagagaca
tccacaacacctcatttagtaactggaacccacagcactgaaaaaccaagtacagcacat
ataattacgggcataaaaaccacaacaacaattcctgcagaaacaactaccccaacaata
gagactgaaaaatccacaccaaaaattacatcaaaacctacaacacctcatacagaaact
acaactactggcactcaaacatctgaaactacaaacataattacaggaacagtctccaca
acaacaattcatgtagaaacaactaccccaacaatagagactgaaaaatccacaccaata
attacatcaaaacctacaacacctcatacagaaactacaactgctggcactcaaacacct
gaaattacgaacataattacagaaatattctccacaacaacaattcatgcagaaacaact
accccaacaatagagactgaaaaatccacaccaataattacaccaaaacctacaacacct
catatagaaactacaactactggcactcaaacacctgaaattacaaacataattacagaa
atattctccacaacaacaattcatgcagaaacaactaccccaacaatagagactgaaaaa
tccacagtcccagaaacatctactacagcacccagtgactgctatatttgcaaatggtca
aaatggattaacaatgactaccctggacacgatagagatggagattatgaaacattagaa
aagatttctgatccagatttgagtgtttgtagaaaaccactagaaattcagtgtcgatcc
aatttttttaaagatgtgcctttagaagatttaaatcaaaatgtaacctgcagccctacg
gatggactaatctgtcgtaataaggatcagacacctccaaaatgttatgattatgaaatt
cgggtaaaatgttgcacttacatatgtgggcctagcacaacaacaattcatgaacagtct
ccacaacaacaattcatgtag
DBGET
integrated database retrieval system
