Xiphophorus hellerii (green swordtail): 116710578
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Entry
116710578 CDS
T07363
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116710578 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116710578 (thoc7)
03041 Spliceosome [BR:
xhe03041
]
116710578 (thoc7)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116710578 (thoc7)
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116710578 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
OVT1
Zw10_N
OSTMP1
Peptidase_S10
Suppressor_APC
DUF1351
Terpene_synth_C
Sec8_N
DASH_Dad2
DUF4284
V_ATPase_I
COG6_N
Motif
Other DBs
NCBI-GeneID:
116710578
NCBI-ProteinID:
XP_032405606
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All DBs
Position
20:28380194..28382271
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AA seq
203 aa
AA seq
DB search
MGAVTDDEVIRKRLLIDGDGAGDDRRINLLLKSFTKWCNSPGSPEEGFTQYQRMLGTLAQ
CEFSMGKTLMVYDMNLREMENYEKIYSNIEQNITSAHDKIAECKKEIQRAKRIRKNRQEY
DALAKIIQQHPDRHETLKQLEALDKELQHLSHIKENVDAKLELRKKQFHVLLTTIQELQQ
TLENDEKSDNDDQSQESPAQNGE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgttactgatgatgaagttataagaaagcgtcttctcattgacggcgacgga
gctggagatgaccgcagaatcaacctgctgttgaagagcttcactaaatggtgcaactct
cctgggagccctgaggaaggatttacccagtatcagaggatgctgggaactctggctcag
tgtgagttttctatggggaaaacgttgatggtttacgacatgaatcttcgggaaatggag
aattacgagaagatttactcaaacatagagcaaaacatcacgtccgctcacgacaagatt
gcagaatgcaaaaaggaaatacagagagcgaagagaatacgaaaaaatcgacaagaatat
gatgctttggcaaagataatacagcagcatccggatcggcatgaaaccctcaagcagctg
gaggcattagacaaagaactccaacatttgtctcacattaaggagaatgtggatgcgaag
ttggagttgaggaagaagcagttccatgttcttctcaccaccattcaggagctacagcag
acacttgaaaatgacgagaagtcagacaacgacgaccaaagtcaggagagccctgcacag
aatggagaatga
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