Xiphophorus hellerii (green swordtail): 116710610
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Entry
116710610 CDS
T07363
Symbol
smpd4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00600
Sphingolipid metabolism
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116710610 (smpd4)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
116710610 (smpd4)
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
116710610
NCBI-ProteinID:
XP_032405635
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Position
20:complement(4552675..4570309)
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AA seq
838 aa
AA seq
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MSSPSLQQPSFLLANLKADATSKPLIQRCQDLLKIIDEYPAKELHLIFPWLVENVFGSLD
GVISGWNLRLLHSRSNEFNLVLDFLSPSGPMMKLVYKLQAEEYKYEVPVHYLPGPVKACI
QEGVLPDCPLFHNKLQFPLPGVLTLNVALNPFEFFMFNLAYCLIAPRNCLQPQLCSSTDS
AYFVLVDLYLKYFLPVEGSVPASPFTDSRGSVAAPSPRASSVSFAGYGVHSPSLLKHHIF
HQPSVNADPAAQEIWRSEALLQMFVEIWLHHYSLDLYQKLQSPQVKLALLQYRLSMSSMP
CQPLAPPGSGTLHTYQVLLPFHSAAPPWGLLEEPFNPSEEHVLVVRLLVKHLHAFSSSLK
PEPPPSPAHSPPHTSPLEEFKRVVVQRFVQQKLYLFLQHCFGHWPLDASFRAVLETWLSY
IQPWRYTGEKPNAQPDQNRTVPDKWEPFVHENLLLYTKLFQGFLNRATRTDLVNAKNALM
VFRAAKVLAQPNLADMIQRGEQLFLEPEHVLPHRQPRGYLTPGHGGSYLSPRQRMVTDTA
FKVKSHVYSLEGQDCQYKQMFGSEVRGVVMRLIQIIAQARHTAKRISDQSSEAAASGSFL
SWFGLASSDLSNAFPGAEPEDSGEYLKKTHEFLDRALENLCHIFKLNQNQLAQLVANLGA
AQDDGRANQLPDCVQGETGPVLTDLGRRQIINGLRRFEVQYQGDPELQPIRSYESALLVR
LLYRASSLLNNRLQAQMGALCSRSDFLGRLGRRYLTDPDSCVRLRRSPMSQRALERRQQP
RLSLRPLASYRTLLLLLLFYALGALLSLGPLCSTALLLTGALLYGVLMTLCAEKLKTQ
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccaagcttacagcagcccagcttcctgctggcaaaccttaaagctgacgcc
acctccaagcctctgatccagcgatgccaggacctgctgaagatcatagacgagtatccc
gctaaggagctgcacctgatcttcccctggctggtggagaacgtgtttggaagtctggat
ggcgtcatctccggctggaacctgcgcctgctgcactcacgcagcaacgagttcaacctg
gttctggacttcctgagcccgagtggcccgatgatgaagctggtgtacaaacttcaggca
gaagaatacaaatacgaagttcctgtccactatctcccgggtccggtgaaggcctgcatc
caggagggcgttcttcccgactgtcctctgttccacaacaagctgcagttcccgctgccg
ggcgtcctgacgctgaacgtcgctctcaatcctttcgagttcttcatgtttaatttggcc
tactgcctcatcgctcccaggaactgtcttcagccgcagctctgcagctccacagacagc
gcatacttcgtgctggtcgacctgtacctcaagtacttcctgcccgttgaaggaagtgtt
cctgcgtctccgttcaccgactccagaggctctgttgcggctccgtcgccacgagcttcc
agtgtgtcgtttgcgggttacggcgtccacagcccgagcctcctgaagcaccacatcttc
caccagccgtcggtgaacgcagaccctgcagcgcaggagatctggaggtccgaggcgctg
ctgcagatgtttgtagagatctggctccatcattactccctggacttgtaccagaagctg
cagtctcctcaggtaaagctggcgctgctgcagtaccgcctcagtatgtccagcatgccg
tgccaacccctcgcccctcctggctctgggaccctccacacctaccaagtacttttacct
tttcactcagcagcgcccccctggggcctcctggaggagcccttcaatccgtcagaggag
cacgtgttggtggtgcgcctgctggtgaaacatctgcacgccttctccagcagcctgaag
ccggagccgccgccctcgccggcccactcccccccccacaccagcccgctggaggagttc
aagagggtggtggtgcagcgctttgtgcagcagaagctctacctgttcctgcagcattgc
ttcggacactggccgctggacgcctccttcagagccgtgttggagacgtggctcagctac
attcagccttggagatacacaggagagaagccaaatgcccaacccgaccagaacagaacc
gtgccggacaaatgggagccgtttgtccacgagaacctgctgctctacaccaagctgttc
cagggcttcctgaaccgggccacgcggaccgacctggtcaacgccaagaacgccctgatg
gtgttccgggccgccaaggttctggcccagcccaacctggcagacatgatccagagaggt
gagcagctgtttctggagccggagcacgtcctgccccaccggcagccccgcggttacctg
acgccgggccatgggggcagctacctgtcgccacggcaacggatggtgactgacacggcg
ttcaaggtgaagagccacgtgtattccctggaaggacaggactgccagtacaagcagatg
tttggctccgaggtccgaggagtggtcatgaggttgatccagatcatcgcgcaggcccgc
cacacggccaagcggatctcggatcagtccagcgaggcggctgccagcggctccttcctg
tcctggttcggactcgcctcctccgacctcagcaatgcttttcccggcgccgagcccgag
gacagcggcgagtacctgaagaagacccacgagttcctggaccgggccctggagaacctg
tgtcatatctttaagctgaaccagaaccagcttgcccaacttgttgccaacctgggcgcc
gcgcaggacgacgggcgcgccaaccagctgccggactgcgtccagggcgagactgggccg
gttctgacggacctgggccggagacagatcataaacggcctgcgccgctttgaggttcag
taccagggcgatccagagctgcagccaatcaggagctacgagagcgccctgctggtgcgg
ctgctctatagggcatcatctctgctgaacaacaggctccaggcccagatgggcgctctc
tgctcgcgctcagacttcctgggtcggctcggccggcggtacttgacggacccggactcc
tgcgtgcggctgcggcgcagcccgatgtcccaacgggcgctggagcgccgccagcagccg
cggctcagcctgcggccgctggccagctaccggacgctgttgctgctgctgctgttctac
gcgctgggggcgctgctgtcgctcgggcccctctgcagtacggccctgctcctcacgggg
gcgctgctgtatggcgtcctgatgacgctgtgtgctgaaaaactgaaaacgcaataa
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