Xiphophorus hellerii (green swordtail): 116710703
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Entry
116710703 CDS
T07363
Symbol
bcdin3d
Name
(RefSeq) RNA 5'-monophosphate methyltransferase
KO
K25191
RNA 5'-monophosphate methyltransferase [EC:2.1.1.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116710703 (bcdin3d)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116710703 (bcdin3d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bin3
Methyltransf_31
Methyltransf_25
Methyltransf_12
Methyltransf_32
Methyltransf_11
Methyltransf_23
Ubie_methyltran
Methyltransf_36
PrmA
DUF6961
Motif
Other DBs
NCBI-GeneID:
116710703
NCBI-ProteinID:
XP_032405768
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All DBs
Position
20:5236819..5240852
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AA seq
246 aa
AA seq
DB search
MATCPNLKDPDNAVNDPGAAPYGNFINYYSFNPPENRLSLIPATLLQDLGYRDGGDEPTL
ILDVGCNSGDLSVAIYKHLVQEPEESTVQLLGFDLDETLVERAEQTNPLHSNISFIQLDI
TEETNQLQDFLSQHSCSHFHLCLCLAVTMWVHLNHGDSGLLQLLSRLAAISTHLLLEAQP
WKCYRSAARRLRKLGRSDFDHFKTLKIRGDVAEHATAHLERHCGMELMQSFGSTAWDRKL
LLFRRR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatgtccgaatcttaaagatcctgacaacgcagtaaacgaccccggtgctgct
ccttacggaaactttataaactattacagctttaaccctccggaaaaccgcctgagtctg
atcccagcaacgctcctgcaggatttaggctacagggacggaggggacgagcccacgctc
atcctggacgtggggtgcaactcaggggacctgagtgtggccatctacaagcatcttgtc
caggaaccagaggagagcacagttcagcttctggggtttgacttggatgaaactcttgtt
gagcgcgcagagcagaccaaccctctccacagcaacatctccttcatccagctggacatc
actgaggaaaccaaccagctgcaagacttcctcagccagcacagctgctcccacttccac
ctgtgtctgtgcctggccgtcaccatgtgggtccacctgaaccacggagactcgggcctg
ctgcagctgctgtcgcgcctcgccgccatcagcacccacctcctgctggaggctcagccc
tggaagtgttaccgctctgcagcccgccgcctcaggaagctgggccgctcggacttcgat
cactttaagaccctgaagatccgcggcgacgttgcagaacacgccacggcgcatttggag
agacactgtggcatggagcttatgcagagcttcggcagcaccgcatgggaccggaagctg
ctgctttttagacgcagatga
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