Xiphophorus hellerii (green swordtail): 116710745
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Entry
116710745 CDS
T07363
Symbol
trpc4ap
Name
(RefSeq) short transient receptor potential channel 4-associated protein isoform X1
KO
K11796
Trpc4-associated protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116710745 (trpc4ap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116710745 (trpc4ap)
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116710745 (trpc4ap)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
116710745 (trpc4ap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
Translin
Motif
Other DBs
NCBI-GeneID:
116710745
NCBI-ProteinID:
XP_032405849
LinkDB
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Position
20:complement(25469594..25483640)
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AA seq
774 aa
AA seq
DB search
MATLLGSEFSSSGRKRRNCNSNIVTKLTSSKITGKGFNRGTQLPRGLLQERDKPAKWHGI
PDLLQKLHESSHPNSDLSHAHGYLKSLSSQLSVEAMSFVTEDRKTAQESTFPNTYTFDLF
GGVDLLVEILMRPTLTMQKKKPKMNDELVKDCLSVLYNCCICTEGVTKSLAARDDFVLFL
FTLMTNKKTFLQTATLIEDILGVKKEMIQLEGIPNLSGLVQSFDQQQLANFCRILSVTIS
EPDIGNDDKHTLLAKNAQQKRNACPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGAN
FLQELEDWYTWLDNALVLDALMQMATEEAEQSSTESSDESPLATSPLRHRLPQSMKTVHE
IMYKVEVLYVLCVLLMGRQRNQVHKMLADFRLIPGLNNLFDKLIWRKYTASNHVVHGQNE
NCDCSPEISFKIQFLRLLQSFSDHHENKYLLLNNQELNELSAISMKANIPEVEALVNTDR
SLVCDGKKGLLTRLLTVMKREPPDSSFRFWQARAVESFLRGATSYADQMFLLKRGLLEHI
LLCIIDSGCTSRDVLQSYFDLLGELMKFNIDAFKRFNKYVNTPEKFQAFLTQINSSLVDS
NMLVRCIVLSLDRFESQTEDVKVMEVLSECCLLSYVARVENRLSFLFRLINIINVQTLTQ
ENVSCLNTSLVILMLARRKAKLPFYLNALREKEYMEKYPGCLLNNFHNLLRFWQRHYLNK
DKDSTCLENSSCIPFSYWKETVSVLLGSDRTSRCAIVSYIDEPFIDLDRDLLED
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttctggggtctgagttctctagtagtggaagaaaacgaagaaattgtaac
agtaatatagtcacaaagttaacgtctagtaaaataaccgggaaaggtttcaaccgagga
acacagctccctagaggcttgcttcaggagagagataaacctgctaagtggcatggcatc
cctgacctgctccagaagctccacgagagcagccaccccaacagcgacctctcccacgct
cacggctatctcaagagcttatcatcacagctctcggtggaggccatgtctttcgtcaca
gaagacaggaagaccgctcaggaatccaccttccccaacacctacacctttgatctgttt
ggtggagttgatctgcttgtggaaatcttaatgagacccacgctaactatgcagaagaag
aaacccaaaatgaatgatgagctggtcaaagactgccttagtgttctctacaactgttgt
atatgtacggagggagtgacaaagagcctggcagccagggacgactttgttctgtttctc
ttcactctgatgacaaacaagaagacgttcctgcagacggcgacgctcattgaagacatt
cttggagtgaaaaaggagatgatccagttggaaggaatccccaacctctcaggtctggtc
caaagcttcgaccagcagcagctggccaacttctgccgcatcctgtccgtcaccatctca
gaaccagatatagggaacgacgacaagcacacgctactggccaaaaacgctcagcagaag
cgcaacgcctgcccatctcgcgccgaggtcaaccaggtgactctactgaacatcccgggc
ttcattgagcggctgtgtaagttagccactagaaaagtgtctgaagccacaggagcaaac
ttcctgcaggagctggaggactggtacacctggctggacaacgcactggtgcttgacgcg
ctcatgcagatggccaccgaggaggctgagcagagcagcacagagtcatcagacgagagt
cctctggccaccagccctctgagacacaggctgccccagtccatgaagaccgtccacgag
atcatgtacaaggtggaggttctgtacgtgctctgcgtcctcctgatgggccgacagagg
aaccaggtccacaagatgctggccgatttccgtctcatcccggggctcaacaacctgttc
gacaagctcatctggaggaaatacaccgcgtccaatcatgtggtgcacggccagaatgag
aactgcgactgcagcccagagatatcctttaaaatccaattcctgcggctactccagagt
ttcagcgatcaccatgagaacaagtacctcttgctcaacaaccaggagctgaacgaactg
agtgccatttccatgaaagccaacatcccagaggtggaagctctagtcaacacagacaga
agcttagtttgtgacggaaagaagggtctcctcacgcgtctcctcaccgtcatgaagagg
gaacctcccgactcatcctttaggttctggcaggcgagggcagtggaaagttttctcaga
ggagcaacatcttatgcagaccaaatgttcctcctaaagcgagggctcctagagcacatc
ctgctctgcatcatagacagcggctgtacgtctcgagacgtcctccagagctactttgac
ctgctgggggagctcatgaagttcaacattgatgcttttaaaaggttcaacaaatatgtc
aacactccagagaagtttcaggccttcctgactcagatcaacagctccttggtggactcc
aacatgctggtgcgctgcatcgtcctctcactggaccgctttgaaagccagaccgaagat
gtcaaagttatggaggtgctttctgagtgctgcctgctgtcctacgtggccagagttgaa
aacagattgtccttcctcttccgactcatcaacatcatcaacgtacaaacacttacgcag
gagaatgtgagctgtttaaataccagcttggtgatcttgatgttggccagacgaaaggcg
aagctgcccttctatctcaacgccctgcgggagaaggagtacatggagaaataccccggg
tgcctgctgaacaacttccacaacctgctgcgcttctggcaacggcactacctcaacaag
gacaaggatagcacatgtctggagaacagctcctgcatcccgttcagctactggaaggag
acggtgtcagtacttctgggctctgacagaacttctcgctgtgccattgtgagttacatt
gacgagcccttcatagatctggacagggacctgctggaagattga
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