Xiphophorus hellerii (green swordtail): 116710840
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Entry
116710840 CDS
T07363
Name
(RefSeq) protein snail homolog Sna-like isoform X1
KO
K05707
snail 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116710840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116710840
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
116710840
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-Di19
zf-C2HE
Zf-C2H2_ZNF451_6th
Zf-C2H2_ZNF451_1st
zf-C2HC_2
zf-C2H2_15
Zn_ribbon_Elf1
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
DUF5810
DUF7410
HypA
Motif
Other DBs
NCBI-GeneID:
116710840
NCBI-ProteinID:
XP_032405987
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Position
20:25421590..25426715
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AA seq
260 aa
AA seq
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MPRSFLVKKYFAKQKPNYSELEYQNADTSLETYPLAELPSADNSTSTCFTTGLVWDLSVL
PALYLPTVHSEASGTSGPLDLSSPCSLSSSASSSGEEDEGRSSDPPSPEPVIKYAPRQRM
KCTGVMAHVSPPEEEEERGETPAMAARPAFLCKHCPKEYTSLGALKMHIRSHTLPCVCTT
CGKAFSRPWLLRGHIRTHTGERPFSCPHCNRAFADRSNLRAHLQTHAEVKKYQCGVCSRT
FSRMSLLQKHSSSGCCSTLG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtctttcttggtaaagaagtatttcgctaaacaaaagccaaactacagcgaa
ctggaatatcagaatgcagatacttcactggagacctatcctcttgctgagttgccatca
gcagacaacagcacctccacctgcttcaccacaggtctggtgtgggacctgagcgtcctc
cccgccctctacctgcccaccgtccattcggaggcctctggcacctcgggccccctggac
ctgagctccccttgcagcctcagcagcagcgccagcagcagcggcgaggaagacgagggg
cgcagctcggacccccccagcccagagcccgtcatcaagtacgcccctcgccagaggatg
aagtgcaccggcgtcatggcccacgtcagcccccccgaagaagaagaggagagaggagag
accccggcgatggcggccaggccggctttcctctgcaagcactgccccaaggagtacacc
agcctgggggctctgaagatgcacattcgctcacacaccctgccttgtgtctgcaccacc
tgcgggaaggcgttctccaggccctggctgctgcgcggccacattcgcacacacacaggt
gagcgtccgttctcgtgtccccactgcaaccgggcttttgcggaccgttccaacctgagg
gcccacctgcagacccacgccgaggtaaagaagtaccaatgcggcgtctgctctcgcacc
ttcagccgcatgtcgctgctgcagaagcacagctcctcaggatgctgctccactttgggc
tga
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