Xiphophorus hellerii (green swordtail): 116710917
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Entry
116710917 CDS
T07363
Symbol
yod1
Name
(RefSeq) ubiquitin thioesterase OTU1
KO
K13719
ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116710917 (yod1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116710917 (yod1)
Peptidases and inhibitors [BR:
xhe01002
]
Cysteine peptidases
Family C88
116710917 (yod1)
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GFIT
Motif
Pfam:
zf-C2H2_OTU1_C
OTU1_UBXL
OTU
Ubiquitin_2
ubiquitin
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
116710917
NCBI-ProteinID:
XP_032406109
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Position
20:7562295..7567266
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AA seq
300 aa
AA seq
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MLRLRCKTKNGSHIMQGLTHQSCVQELKSKVEELTGIPCNVQKIMVGYPPSSLDLRNLDA
HLKDYPIKSGDTLIVEEEKNKLKPQDHPIVKAPHLELSPVLARRVVPADNSCLFTSVNYV
VEGGVYDPACAPEMRSLIAQIVSSDPTAYCEAVLGKTNEEYCAWIKRDDTWGGAIEVSIL
SKFYQCEICVVDTQTVRVDRFGEDAGYHKRVLLIYDGIHYDPLQKEVPHSETPPQTIFST
TDDIILAQALELADEARRKRQFTDVNRFALRCMVCQTGLVGQKEAREHAKETGHTNFGEV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcttcgctgtaagaccaaaaacgggagccacataatgcaaggtttgactcac
cagtcctgcgtccaggagctgaagagcaaagtggaggagttaacagggatcccatgcaat
gtgcagaaaataatggttggttacccgccatccagccttgatctccgaaatttagatgcc
catttaaaagattatcccatcaaatcaggagacacactcattgttgaggaggagaagaac
aagttgaaacctcaggatcatcccatagtgaaagcgccccacttggaactctctcctgtg
ctggcacgtcgagtcgtcccagcagacaactcctgcctctttactagtgtgaattatgta
gtcgaaggaggtgtgtatgaccccgcttgtgcccccgaaatgcgcagccttatagctcag
atagtgtcaagtgaccctacagcttactgtgaggcagtcctgggaaaaaccaacgaggag
tactgcgcatggataaaacgtgacgacacctgggggggagccattgaggtgtccatcctg
tccaagttttaccagtgtgagatctgcgtggtggacacccagacagttcgggtagataga
ttcggagaggatgctggataccacaaacgcgtgctgcttatctacgacggcatccactat
gaccctctgcaaaaagaggttccccattccgagaccccacctcagactatcttctctacc
actgatgacatcatcttggcccaagcccttgaactggcggacgaggcccgccgcaagcgt
cagttcactgacgttaaccgctttgcattgcgctgcatggtgtgccagacgggcctggtg
ggacaaaaggaggcccgtgagcatgccaaggagacaggccacaccaattttggtgaagtg
tga
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