KEGG   Xiphophorus hellerii (green swordtail): 116710930
Entry
116710930         CDS       T07363                                 
Name
(RefSeq) lysine-specific demethylase 5B-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xhe01009]
    116710930
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xhe03036]
    116710930
Enzymes [BR:xhe01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     116710930
Protein phosphatases and associated proteins [BR:xhe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116710930
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116710930
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 PHD-1st_NSD CCDC28
Other DBs
NCBI-GeneID: 116710930
NCBI-ProteinID: XP_032406127
LinkDB
Position
20:20888713..20907568
AA seq 1482 aa
MTQPQLNEFIPPPECPVFEPSWEEFADPFAYINKIRPIAEKTGICKIRPPPEWQPPFACD
VDRLKFMPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLYQLNKLV
NEEGGFDAVCRERRWTKISVKLGFAPGKAIGSHLRAHYERILYPYNLFQIGSNLPKATLT
NDTKDKEYTPHDLPQRQSVQPQETCSIARRAKRMRSERLSFKKEPGEICENRPNLRRRMG
TYVGKPEPVRMAVTEIKQEPTDHMDPKEHEETDLNKINKPPQNKVDQYMCLICGSGSAED
RLLLCDGCDDSYHIFCLIPPLHDVPKGDWRCPKCLAQECGKPPVAFGFEQASRSYTLQAF
GDMADSFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRN
SHFEVSPEDEHYLTSGWNLNNMPVLDASVLTHITADICGMKVPWLYVGMCFSSFCWHIED
HWSYSINYLHWGEPKTWYGAPGYAAEHLESVMKKLAPELFESQPDLLHQLVTIMNPNTLM
NNGIPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTMDWMPIGRNCVDHYRQLS
RYCVFSHDEMVCNMAFKADTMDVELASALLEDMTAMIQEERELREKIGKMGVVQSRQVDY
ELLPDEGRQCCKCRTTCYLSGIVCSCSPDKMACLYHAQYLCSCPNSNLTLHFKFTLDELY
PLMESVKLRSQSYKEWLSAVEDIVDNKGAKKKGLEELHSLVEQAETKAFPKICLLDQLRT
VTSEADKVAVMAQQLLNGKRQTRYRSGGGKSQNQNELTVEELRSFVQQLDNLPCNIRQAP
LLKDLLTRVDDFQQRSNRLLSDEAPSPQELQELLDVSLGLDVELPQLPLLRERLEQARWL
EAVQQASSRPDSLCLDTMRRLIDQGVGLAPHSSVERAMARLQELLTVSEQWEERVLGLMD
TRPYPSIEMLDAALQEVENIPAYLPNCLQLKDVVTKAKKWLNEAEMLQMGGRIPVLDSLS
ELVLRADGIPVRLDLLGRLEALISDVQSWKESAAKTFLLKNSPLSLLEVLCPRCDVGSGH
QKCRSKKVKEALQLNKKASLKLESVCDVERALSESKDSPSAMSALADVRQREMELLLALR
ASNESKLLPAENSSALTVCVCQKAPSGAMVQCELCRDIFHRDCVTTAAELEYGQAWLCPL
CQRSRKPPLDKVLPLLASLQRIRVRLPEGDALRFLIERTVRWQHKVQQACTDGLLERVAT
TGRLGPKTSSYLTQEINGSFHTKHLSIPLQALGPELEELMVEGFLLQVTLPETEQLYRYL
LYKLAPPSSHNSPSRNGAEQSDEGSPRHNKNGGSSLKKEVNGQSKRTKRRKDSSDSQHSE
KAKKSRKKKPKKSKERSDESKRTSSPSHTSSDPALSDSEEDFSLCAAPWCREPEGDEVNW
VQCDGNCNQWFHQVCVGLSAERAEKEDYICISCTQPDYDRGE
NT seq 4449 nt   +upstreamnt  +downstreamnt
atgactcaaccgcagctgaacgagtttattcctcccccggagtgccctgtttttgagccc
agctgggaggaattcgccgacccttttgcgtacatcaacaaaatacgaccaattgcggag
aaaactggcatctgcaaaatccgaccaccaccggaatggcagccaccttttgcttgtgat
gttgacagactaaagtttatgccacgaatacaaagacttaatgagttggaggctcagact
agagtcaaactcaacttcctggatcaaattgcaaaattctgggagctccaaggatgcact
ctgaaaattcctcatgtcgaaagaaagattttagatctgtaccaactcaataagttggta
aatgaagagggaggcttcgatgcggtttgcagagagcgccgctggactaagatatcagtc
aagttgggatttgctcctggcaaggccatcggctctcatctgcgggcgcactatgagcgg
atcctctacccatataaccttttccagattggatccaatctgcctaaggccaccttgacc
aacgacactaaagacaaggagtacacgccacatgacctgccacagcgccagtctgtgcag
ccccaggagacctgcagcatcgctcgcagggctaaacgaatgcgatctgaacgactctct
ttcaaaaaagaacctggtgaaatttgtgagaatcgccccaatctgaggaggagaatggga
acctatgttggcaaaccagaacctgtgagaatggcagtcactgaaataaaacaggagcca
actgatcacatggacccaaaagaacacgaagaaactgatttaaataaaataaacaaacct
ccacaaaataaagtggaccaatacatgtgcctgatatgtggtagtgggagtgcagaggac
cgcttattgttgtgtgatggttgcgacgacagctatcacatcttttgtcttatcccgccc
cttcacgatgtccctaaaggtgactggaggtgccccaagtgcctggctcaggaatgtggt
aaacctcctgtagcatttgggtttgagcaagccagcaggagctacaccctccaagctttt
ggggacatggctgactcgttcaagtctgattactttaacatgccagttcatatggttcct
actgagctggtggagaaggagttttggcgacttgtcagcactattgaggaagatgtcact
gtggagtacggagcagacatcgcctcgaaggagtttgggagtggttttcctgtgagaaac
agccattttgaagtctctccggaggacgagcattacctgaccagcggctggaacctgaac
aacatgccagtgctggacgcctcggtgctgactcacattacagccgacatctgtgggatg
aaggttccctggctgtatgtggggatgtgcttctcttctttctgctggcacatcgaggat
cactggagctactccataaactaccttcactggggtgagccaaagacgtggtatggagct
ccaggttatgctgcagagcacctcgagtccgtcatgaagaaactggctccagagctgttt
gaatctcagcctgacctgctccatcagctcgtgaccatcatgaatcccaacacgctgatg
aacaacggcatcccgatctaccgcaccaaccagtgtgcaggcgagttcgtgatcactttt
cccagagcttatcacagcggattcaatcagggcttcaactttgctgaagctgtcaacttc
tgcaccatggactggatgcccattggccgtaactgcgtggaccattaccgtcagctgagc
aggtactgcgtcttctcccacgacgagatggtttgcaacatggccttcaaagcagacacg
atggatgtggagctggcatcagcactgctggaggacatgaccgccatgatccaggaggag
agggagctacgagaaaagatcggcaaaatgggtgtggtgcagtctcgacaagttgattac
gagctgctcccagatgaggggcggcagtgctgcaagtgtcggaccacctgctacttgtct
ggcattgtttgctcctgcagtcctgacaagatggcttgtttgtaccacgcccaatacctc
tgctcctgtcccaatagtaacctcacactccattttaagtttaccctcgacgaattatat
ccgctgatggagtcggtgaagctgcggtcgcagtcctacaaagagtggctttctgctgtt
gaagacattgtggacaacaaaggagccaagaaaaaaggtttggaggaacttcacagctta
gtggagcaagctgaaaccaaggctttccctaaaatttgcctcctggatcagctgcgcacc
gtcacctccgaagctgataaagttgctgtgatggcacagcagcttctcaacgggaagagg
cagacgaggtatcgttctggaggaggaaagtcccaaaaccagaacgagttgactgtggaa
gagctgaggtccttcgtccaacagttggacaacctgccgtgcaacattcgacaggctcct
ttactaaaagacctgctgacccgggtggatgacttccagcagcgcagcaaccgtctgctg
tctgacgaggcgcccagccctcaggagctgcaggagctgctggacgtgagtctgggcctg
gacgtggagctgccgcagctgccgctgctgagggagcggctggagcaggcgcgctggctg
gaggcggtccagcaagccagcagccggcccgacagcctgtgtctggacaccatgaggagg
ctgatagaccagggagtgggcctggccccccacagctctgtggagagagccatggctcgc
ctgcaggaactgctgaccgtgtcggagcagtgggaagagcgtgtgctcggcctcatggac
accaggccgtatcccagcattgagatgcttgatgccgctttacaggaagtggagaacatc
cctgcttatctgcccaactgtctgcagctgaaggacgttgttactaaagccaagaagtgg
ctcaacgaagcagaaatgctccagatggggggacgaatccccgtgctggacagcctctct
gagctggttctcagagcggacggcatcccggtgaggctcgacctgctgggccgactggag
gctctgatcagcgacgtgcagagctggaaggagagcgccgcgaaaacattcctactgaaa
aactcccccctgtcgctcctcgaggtcctctgcccaagatgtgacgtcggttctgggcat
cagaagtgcagatctaaaaaagtaaaagaagctctgcagctcaataaaaaagcttcccta
aaactggagtcggtgtgtgatgtggagagagctctgtctgagagcaaagactctccgtct
gctatgagcgctctggctgacgtgcggcagagggagatggagctgctgctggcgctcaga
gcttccaacgagtccaaacttctgcctgctgaaaactcctctgcacttactgtctgcgtt
tgccaaaaggccccttcaggcgccatggttcagtgcgagctgtgccgagacatttttcac
cgcgactgcgtcaccacggcagcagagctggagtacggccaggcctggctctgcccgctg
tgccagcggtcgaggaagcctcctctggacaaggttctgcctctgctggcctcgctgcag
aggatccgggttcgtctgccagagggagacgcgctccgcttcctcatcgaaaggacagtg
aggtggcagcacaaagtccagcaggcctgcaccgacgggctgctagagagagtggcaacc
acggggagactcggacctaaaacatcttcatatttgactcaggaaataaatggttcattt
cacacaaagcatctctctattccactccaagcacttggtcctgagctggaggagctgatg
gtggagggtttcctgctgcaggtcaccctgcctgagaccgaacagctgtacagatatctg
ctgtacaaactggccccaccgtcctcgcacaactcccccagtaggaacggggcagagcag
tccgacgaggggagcccccgacacaacaagaacggaggctccagtttgaagaaggaagtg
aacggacaaagcaaaaggactaaacggcggaaggatagttcagactctcagcatagcgag
aaggccaaaaagtctcgcaagaagaagccgaagaagagcaaagaaaggagcgacgagtcg
aagaggacaagttccccctcacacacctcgtcagatccggctctttctgattcagaggag
gacttctcgctgtgtgctgcaccgtggtgcagagagcctgaaggcgacgaggtgaactgg
gtccagtgtgacggtaactgtaatcagtggttccaccaggtttgtgtgggcctgtctgct
gagcgtgctgagaaagaggactatatttgcataagctgcacacagcctgattacgaccga
ggcgagtga

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