Xiphophorus hellerii (green swordtail): 116710936
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Entry
116710936 CDS
T07363
Symbol
cxxc1
Name
(RefSeq) CXXC-type zinc finger protein 1
KO
K14960
COMPASS component SPP1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116710936 (cxxc1)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116710936 (cxxc1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
116710936 (cxxc1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
116710936 (cxxc1)
COMPASS/SET1 complex (yeast)
116710936 (cxxc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
SDA1_HEAT
Motif
Other DBs
NCBI-GeneID:
116710936
NCBI-ProteinID:
XP_032406133
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Position
20:complement(25141107..25147488)
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AA seq
571 aa
AA seq
DB search
MDSELSDVDTAPGPESSSMEGENAPLYCICRKPDINCFMIGCDNCNEWFHGHCINITEKM
AKAIQEWYCMSCRDENPLLEVKYRSKKSREKEPDSDRTERQYSTPSTPDYRSDRRRGSKV
KRSVRMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRFRQCEVRARKMLRVKEEE
LSLRERRENSHHRRRRYSEDYDSEAELYQQYRAAGLGGDLAWGSDDDDDEPAFSPVMRKK
AIKVKHVKRREKKIEKKKESRRHKQKQKHRDKSRHSERGDLRDSGGMRQCLGPNCVKGAR
PNSKYCSEDCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKQLERIRRDQQNARLRLT
DMERRFHELEGIIAKAKQQAVQQDEEVNEGEGDDTDLQIFCVSCGHPINPKVALRHMERC
YAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPVDEVCG
CPLVKNVFEPTGDYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTA
MTNRAGLLALMLHQTIQHDPLTTDLRSNKDR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgagctgtcggacgtggacactgcgccgggccccgagagcagcagcatggag
ggggaaaacgctccgctttactgcatttgccgaaagccagacatcaactgcttcatgatc
ggctgcgacaattgcaacgagtggttccacgggcactgcatcaacatcacggagaagatg
gccaaggccatccaggagtggtactgcatgagctgcagagacgagaacccactgctggaa
gtcaaatacagatccaagaaaagccgagagaaggagccggactcggacagaaccgagcga
cagtacagcacgccgagcacgccggactacagaagcgacagacggcgcggatctaaagtc
aaacgttcggtgcgcatgtgcggggaatgcgagccgtgcaggcggaccgaggactgcgcc
cagtgcgacttctgcaaggacatgaagaagttcggagggcccaataaaatccgacagaag
tgccgcttcaggcagtgcgaggttcgagccaggaaaatgctgcgcgtgaaggaggaggag
ctctccctgcgcgagaggagggagaactcccaccacagaagaagacggtactccgaggac
tacgacagcgaggcggagctctaccagcagtacagggcggcgggactcggcggcgacctg
gcgtgggggagcgacgacgacgacgatgagccagctttcagccccgtcatgcggaagaaa
gccatcaaggtgaagcacgtcaagaggcgggaaaagaagattgagaaaaagaaagagtcg
cggcgccacaagcagaagcagaagcacagggacaaaagccggcacagcgagcggggggat
ctgcgggatagcggggggatgcgtcagtgtctgggacccaactgtgtgaaaggagccagg
cccaactccaagtactgctccgaggactgcggcatgaagctggcagccaaccggatctac
gagatcctccctcagcggatccagcagtggcaacagagtccctgcatcgccgaggagcac
ggcaagaagcagctggagcgcatccgccgggaccagcagaacgcccggctccgcctcacc
gacatggagcggcgcttccacgagctggagggcatcatcgccaaggccaagcagcaggcg
gttcagcaggacgaggaggtgaacgaaggtgagggcgacgacacagacctccagattttc
tgcgtgtcctgcggtcatcccattaatccgaaagtggcgctgagacacatggagagatgc
tacgccaagtacgagagccagacgtcctttggttccatgtatccaacaagaatagagggt
gccaccagactcttctgtgacgtgtacaacccccagagcaagacctactgcaagaggctg
caggttctgtgtccagaacattccagagatccaaaggtgccggtagacgaggtgtgcggt
tgccctctggtgaagaacgtgtttgagccgacaggagactactgcagggtgtccaaaagg
aaatgcaacaaacattacaactgggaaaagctgagaagagctgaggtggacttggagcgg
gtcagagtgtggtacaagctggacgagctttttgagcaggagcggaacgtcaggaccgca
atgaccaacagggccggtctgctggctctgatgttgcaccagaccatccagcacgacccg
ctgacgactgatctccgtagcaacaaggataggtag
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