Xiphophorus hellerii (green swordtail): 116710981
Help
Entry
116710981 CDS
T07363
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116710981 (tdrd12)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
116710981 (tdrd12)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116710981 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
116710981
NCBI-ProteinID:
XP_032406227
LinkDB
All DBs
Position
2:complement(31097715..31132237)
Genome browser
AA seq
1154 aa
AA seq
DB search
MLEIFILKVENPSCLWGRVVCGADGSVETTEHYTTLQAQMNLFYQDATQDLNQLKPTSLE
EGQVYVVYWAVKKSWCRAVVRSVITDPTCCRAFCFLVDHGEMIVVSLDKIRVSLQKFLQL
PFWVRRFHLARIQPITLRVSVLEEKVELEPSRQWDFSATLYLHNLLRASTQTEAVLHQLE
SDSTSIELYLTISNIKICVNDDLVANRFACYSSSGLDACDRFPLMLSPSILTQTALKCSD
KQMEENLHSPSEHGGSSESPGTSEAGDWLTTPSLPQSQVPELVTCEEGSRSEDTKEPMFF
NNQTKHGPKASGAERKSKARKETSDQRPDAEMMTQVPLGLLEWLNPEPFNSDPDAVDEVV
SPGDPWVKGILVHSTHSIEPCNTLEDAPITDSLRQVLLRKNYRTLSPADRYSWPAVARGC
NTFVISQNADQPLGYLIPLLTHILLNSLLLSHLSSSGPIAVLLCPGWEKAQIIYNLLEES
KVSQTLHPIIVLVGIGKDEAKAVKFPKNCLLLVTTPFTLVRLLSCHCFLFLRLYHLVLDE
ADQLFTFAPDEMATILQHFQKVTSSEEKASCPRQLVAVAKRWTSHMEDLISNHMPYPSII
ITVPEEAALYGNIQQVILMTVESNKISELLGVLDFSSEVGQKTLIVANSAEEVEDVFKAV
SNKSAFCLKIHKGLLDQLDFVIQQWRKNIGPGTHVILVSTSECLRGLGIRDAACVVHYGF
PPSPKVFGYRLFCMAEHFRNLPKQDQTDSGSPVSRSVLLISERNARHVVGVLRYLERTDA
PLSPVLFSFAEGVHVAREDQKTDRPFCSYLKRFGFCRDRSVCPDRHRINPQSDQSALPSS
GVIEVLPLYIKTASVFYGRLVRQNDKEFDKMASEMMSYYADKKPGAKELLEGALYAVQED
EIFHRVKILALPDHGESIFYNVLVQFIDIGKESDVKSHQILELPPQFHSLPNQAVEMVVC
RVKPADAEIEWHPKVTRAISQKIRGLQHRARAVLCLGNTVFVDPMVRVTQMPGTKTFINE
YNVQTEILKTGMGVNNPEHLDFFRAAVQDNSSKDGGPASSLYPQVVWYQTCDSVIVTVKL
MNPESQRCDFYTDRVVYSGRVNGRSYRADLELHQKIEADICHWEMKSNQPVLKLVKQQQG
HWERLIRSKVPKLC
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaatattcattttgaaggttgagaatccatcatgcctctggggtcgggttgtt
tgcggtgccgatggcagtgtggagaccacagaacattacactactctccaggctcagatg
aaccttttctaccaagatgccactcaagatctaaatcaactgaaacccacttcattagag
gaaggacaggtgtatgtggtatactgggctgtgaagaagtcatggtgtcgtgccgtggtg
cggtccgtcatcaccgacccaacatgctgtcgagctttctgcttcctggttgaccatgga
gaaatgattgtggtctccttagacaagatacgagtgtcattacagaagttccttcagctt
cctttctgggtgaggaggttccatctggcacgaatccaaccaataacccttcgagtatct
gtactagaagaaaaagtagaacttgaaccttctagacagtgggacttttcggctacactt
tacctgcacaacttgcttcgagcatccacccaaacagaagctgtgttgcatcagttggag
tcggactctacctccattgagctctatcttaccatcagcaacatcaagatctgtgtgaat
gatgacctggtagccaataggtttgcatgttacagcagcagtggcctggacgcctgtgac
agatttcctctcatgttgtcccccagcattctaactcagactgctttaaaatgctctgac
aagcagatggaggaaaacctgcattcgcccagtgaacatggagggtcatcagagagtcct
ggtacttcagaagcaggggactggctgacaactccctctctacctcagagtcaagtccct
gagctggttacttgtgaggaaggcagcagatcagaggatactaaagaaccaatgtttttt
aacaaccaaaccaagcatggcccaaaagcttcaggggcagagagaaagagcaaagccagg
aaggagacgtcagaccagaggccagatgcagagatgatgacgcaggttcctctcggtctt
ttagagtggctgaacccagagcctttcaactctgatcctgatgctgtagatgaggtggtt
tcacccggtgatccctgggtgaaggggattctagtgcattcaacccattccatagaacca
tgcaacacattagaagatgctcccatcacagattctcttcgtcaggtcttgcttcggaaa
aactatcgcactctttctccagctgaccgttacagttggccagcggtagctcgtggctgc
aacactttcgttatctcccagaatgctgaccagccacttggctaccttattcctctgctc
acccacattcttttgaactccctcctcttatcccacctctccagttcagggcccatagca
gtgctgctgtgtccgggctgggaaaaggctcagattatatacaacctgctggaggaaagc
aaggtttctcaaaccctccacccaattattgtcttggtgggcattggcaaggacgaagcc
aaggctgtaaaattccccaaaaactgcctgctgttggtgaccacgccatttactcttgtc
cgtttgctgtcttgtcactgctttcttttcctgcgactgtaccatctagtattagatgag
gctgaccagctcttcacttttgcacctgatgagatggcaaccatcctacaacattttcag
aaggtgacttccagtgaagagaaagcatcctgtcctcggcaactggttgctgtggccaaa
agatggaccagtcacatggaggatctaatctctaatcatatgccctatccctccatcatt
ataactgtccctgaggaggctgcactttatggtaacatccagcaggttatcctgatgact
gttgagagcaacaagatatctgaacttctgggagtgttggatttcagttctgaagttggc
caaaagacactgattgtagcaaactctgctgaggaggttgaagatgtgtttaaggctgtc
agcaacaaatcggcattctgtctcaagatccacaagggattactggaccagcttgacttt
gtcatccagcagtggaggaaaaacattggccctggcactcatgttatcctggtgagcacc
agtgagtgcttgaggggccttggcatcagagatgcagcttgtgttgtccactatggattt
ccgccttctcctaaagtgtttggctacagactcttttgcatggctgaacactttcgaaat
ctacctaaacaagatcaaacagacagtggttctccagtcagcagatcagtgctgctgatc
tcagaaagaaatgctcgtcacgttgtgggagttctccgttatctggaacgaactgatgcg
ccactttcacctgtactgttctcctttgctgagggggtacatgtggcccgcgaagaccag
aagacagatcgacctttttgcagctatctgaagaggtttggattctgcagagacaggagt
gtgtgtcctgatcgtcacagaatcaaccctcagtcagatcagtctgctcttccttcctct
ggagtcattgaagtcttaccgctctacattaagacagcatctgtcttctatggtcgtttg
gtcagacagaatgacaaggagtttgataaaatggcctctgagatgatgtcttattatgct
gacaagaaacctggagccaaggagctgctggaaggagctttatatgcagttcaagaggac
gagatcttccacagagtgaagatcctggcgctacctgaccatggtgaaagcatcttttac
aatgtcttggttcagttcattgatattggaaaggagagtgatgtcaaatcccatcagatc
cttgagctgccgccacagtttcattctctgcctaaccaagccgttgagatggtggtctgc
agggtgaagccagctgatgctgagattgagtggcatccaaaggtcaccagagcaatcagc
cagaagatccgaggtctgcagcatcgagccagagccgttctgtgcctggggaatacagtt
tttgtcgatcctatggtacgagttactcagatgccaggcacaaaaacatttataaatgag
tacaatgtgcagactgagatcctaaagacggggatgggagtcaataatcccgagcatctg
gacttcttcagagcagcggttcaagataacagcagcaaagacggaggtcccgcatcaagt
ttataccctcaggttgtttggtaccagacctgtgactctgtaattgtaacagtgaagttg
atgaatccagagagtcaacgctgtgatttctacacagacagagttgtctacagtggcaga
gtgaacggtcgttcctacagggctgatctggagcttcaccagaaaatagaagccgacatt
tgccactgggaaatgaagtccaatcagcctgttcttaaactggtaaaacagcagcaagga
cactgggagagactcatcaggagtaaggtaccgaaattatgctga
DBGET
integrated database retrieval system
