Xiphophorus hellerii (green swordtail): 116711066
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Entry
116711066 CDS
T07363
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04080
Neuroactive ligand-receptor interaction
xhe04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116711066
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116711066
04081 Hormone signaling
116711066
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xhe04030
]
116711066
G protein-coupled receptors [BR:
xhe04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
116711066
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7tm_4
7TM_GPCR_Srw
DUF6164
Motif
Other DBs
NCBI-GeneID:
116711066
NCBI-ProteinID:
XP_032406336
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All DBs
Position
2:3979270..4015081
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AA seq
448 aa
AA seq
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MTHNLSSRIDTPTNISLSAAVAVSDSLEYKTISVFLVLLVCCVGIVGNIMVVLVVVTTRH
MRTPTNCYLVSLAIADLTVLVAAGLPNVSDSLTGTWIYGNVGCLGITYLQYLGINVSSCS
ITAFTVERYIAICHPIKAQTVCTVSRAKRIITGVWIFTCVYCMLWFFLVDIQVGQDGHVQ
CGYRVKRELYLPIYLIDFTIFYVIPLLLAIVLYGLIARVLYLSPLPSHTETSATTLRRSC
RETSEAARMGRQGRPKTAVSSRKQVTKMLAVVVILFALLWMPYRTLVLINSFVSTPYLDS
WFLLFCRTCIYANSAINPVIYNAMSQKFRSAFRGLYSCQRVDGNQRTLSTAQTCFGTVRD
PRPALQNSNQGNEKETRAVLEPSSDSTSKLHRSEHQETAAVNGMTADHRPDGGHQDFRRE
PGETLQGGGQELDQSVNKTLGSADRTSK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacccacaacctcagctccagaatcgacacgccgaccaacatctccctgagcgccgcc
gtcgccgtctccgactcgctggagtacaagacgatctcggtgttcctggtgctgctggtg
tgctgcgttggcatcgtggggaacatcatggtggtcctcgtggtcgtcaccacgcgccac
atgaggacgcccaccaactgctacctggtgagcctggccatagccgacctgacggtgctg
gtggcggcagggctgcccaacgtatccgacagcctgacgggcacctggatctacgggaac
gtcgggtgtctgggcatcacctacctgcagtacctggggatcaatgtgtcctcgtgctcc
atcactgctttcaccgtggagaggtacattgctatctgccatcccatcaaggctcagacg
gtgtgcacggtgtcgcgtgccaaacggatcataaccggcgtctggatcttcacctgcgtc
tactgcatgctgtggttcttcttggtggacattcaggtcggccaggacggacatgtgcag
tgtggctaccgagtgaaacgggagctctacctccccatctacctcatcgacttcaccatt
ttctacgtcatcccgctgctcctcgccatcgtgctgtacggcctgatagcgcgggtgctc
tacctcagccctctgccgagccacaccgaaaccagcgccaccacgctgcgaaggagctgt
cgcgagacatcggaggctgcgaggatgggccgacagggccggccgaagacggcggtctcc
tccaggaaacaggtgacgaagatgctcgccgtggtggtgatccttttcgccctgctgtgg
atgccctaccggaccttggttctgatcaactccttcgtgtccacgccctacctggactcc
tggttcctgctgttctgtcggacctgcatctacgccaacagcgccataaaccccgtgatt
tacaacgccatgtctcagaagtttcgctccgcgtttcgggggctgtacagctgccagcga
gtggacggtaatcagcggacgctgtccaccgcccagacctgctttggtaccgttcgagac
ccgcggcctgccctgcagaacagcaaccaaggcaatgaaaaggagacgcgggccgtcctg
gagccttcctcggattcgacgtcgaagctccacaggagcgaacatcaggagacggcggcg
gtgaacgggatgacggccgatcatcggcccgacggcggccatcaggacttcagaagagaa
ccaggagaaacgctgcagggaggcggtcaggaattagatcagtcagttaacaaaacactt
ggttctgcagacagaaccagtaaataa
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