Xiphophorus hellerii (green swordtail): 116711090
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Entry
116711090 CDS
T07363
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2-like
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04148
Efferocytosis
xhe04218
Cellular senescence
xhe04310
Wnt signaling pathway
xhe04370
VEGF signaling pathway
xhe04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116711090
04370 VEGF signaling pathway
116711090
04020 Calcium signaling pathway
116711090
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116711090
09143 Cell growth and death
04218 Cellular senescence
116711090
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116711090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116711090
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
116711090
BRITE hierarchy
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GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
116711090
NCBI-ProteinID:
XP_032406356
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Position
20:complement(5382855..5394172)
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AA seq
879 aa
AA seq
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MTSGGMGLGGLGQDISQAELDFSDLFLYNTPGEDFPVGCVKDDSGALLQNDSQPPLLMVD
HHTTHVSTLAHPASSQDNFPQIPTSDNLPGAVFECLELTSGASNIPAPSPRIEITPSGDS
LSSHTLEPSPGSKALGAYRDCVSPASSNSSSGWPADICSPLNSPSVSPPSGGNYSNSCSA
LDLCPGLQGIHTSSAHSSPGTSPRNSITDETFLQPIHQRSTSPLPHQRSRSTSPQGKRCF
DQSHPCQGGTPIKQRSRSPSPNPSTHEPYYIHQYQAQAEFQSHVQTAPQALEEVLNHLSS
GLPRVGAPVGVGATHPQPPRQDCVYGDRYDWAIDHERMGRSGAEVKSEPFYILPSVWPPT
QPVHQPTTCTFSGLSVAPLPSLEWSLPSQSGQYELLIQQQPRSHHRAHYETEGSRGAVKT
PNGGHPEVQLRGYQGTSPLGLQVFIGTADEKLLKPHAFYQVHRITGKTVTTPSLERIISG
TKVLEILLEPKSHMRVVIDCVGILKLRNADIELRNGETDIGRKNTRVRLVFRVHIREPGG
HFVSLQVASNPIECSQRSAQEFPAVERQDLDRCSVLGGQQMVLTGQNFTSDSKVIFSEKT
QDGQQIWEVEATVDRDKTQANMLFVEVPPYRDRNICQPAKVNFYVINGKKKRSQPQHFIY
TPVIAIKAEPRDDYPLDSYNCSDNHHLSAISMKSLYHHFEQDINPPTLNVSSALYHLATV
DPRSHMLPPDSFEEPAYYQSRAGNVVNNPVMYHSANQLYSNYNTNHPSGPSQCVSARTPM
SKLGEGPQIGDSFEACLVPRHQGFVPPLGKSPLSRYVQVKAGSQIQPVGQPLTQIGSAKG
NHDDKAPEKITIKQENLSYAYLEDVNDIIRRDMKGHSGD
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacttctggaggcatggggcttgggggattggggcaggacataagccaagcggagttg
gacttttcggatctgtttctctacaacacacccggagaagatttccccgttggctgcgtt
aaagatgactcaggtgctctccttcagaatgacagccagcctcccttactgatggtcgat
catcacaccacacacgtctccaccttggcccatccagcgtccagccaggacaacttccct
caaattcccacctcagacaacctgccaggggccgtgtttgagtgtctggagctgacatca
ggagccagtaatatccctgcccccagccccaggattgagatcactccgtcgggtgattct
ctcagctctcacaccctggagccaagccctggctctaaagctctgggtgcatacagggat
tgtgtgagccccgctagtagcaactcctcttcaggctggccggcggatatctgctctccc
ttgaactcacccagtgtctcccctccaagcggtggcaactacagcaactcctgttctgcc
ttggacctgtgcccaggcttgcagggcatccatacttcctctgcacactcctctccaggg
acctcgcctcgcaacagcatcacggatgagaccttcctgcagccgattcaccagcgctcg
acctctccgcttccccaccagcgttcccgctccacctcaccacaaggcaaacgctgtttt
gaccagagccatccctgccaggggggtacgccaatcaagcagcgctcccggagccccagt
cccaacccgtcaacccacgagccgtactatatccaccaatatcaggcccaagcagagttt
cagtcccatgttcagacagcaccacaggccctggaggaagtgctcaaccacctcagttca
ggtttgcctagagttggagctcctgtaggggtgggagccactcatccacagccccctaga
caggactgtgtttatggagacaggtatgactgggcgattgatcatgagaggatgggcagg
tctggagctgaggtgaaatctgagcccttctacattctcccatctgtgtggcctcccact
cagccagtacatcaacccacaacatgcacattcagtggtctctctgtggcaccactcccg
tccttagagtggagtctacccagtcagtccggccaatacgagcttctgatccagcagcag
cccagatcccaccatagagctcactatgagaccgaaggcagccgaggagcagtcaagacg
cccaacggaggccatcctgaagttcagcttcggggataccaaggcacaagtccgctgggg
ctgcaggtcttcatcgggacagcagatgagaagcttctgaaaccgcacgccttctaccag
gtccaccgcatcactgggaagaccgtcaccacaccaagcctggaaaggatcatcagtggg
acaaaggttttggagatccttctggagccaaagagccacatgagagtggtgattgactgc
gttggcattctgaagttaagaaatgctgacattgagttgcggaacggcgagacggacatc
ggacggaagaacacgcgcgtccgtttggtgtttcgtgtccacatccgtgaacccggaggc
cattttgtgtctcttcaagttgcttccaaccccatcgaatgctctcaacgctcggcgcag
gagttccccgcggtcgagaggcaggacctggaccgctgctccgtacttggcggtcagcag
atggtcctaactggacagaatttcacgtctgactccaaagtgatattttctgaaaagaca
caagatggccagcaaatctgggaggtggaggccactgtggacagagacaaaacccaagca
aatatgctgttcgttgaggttcctccttatcgagaccgaaacatttgccagccggctaaa
gtcaacttctatgtcatcaacggaaagaagaagcgcagtcagcctcagcatttcatctat
actcctgtaatagcaatcaaagcagagcctcgggatgactaccctctggattcatacaac
tgctcagacaatcatcacctgtctgccatttcaatgaagtccctttaccatcactttgag
caagacatcaaccctccaaccttgaatgtttcgtccgcactctaccatttagccaccgta
gaccccagaagccatatgctaccacccgattctttcgaggagccagcttattaccagtcc
agagctgggaatgtggtcaacaacccagtgatgtaccactctgcaaaccagctctacagc
aactacaacaccaaccatccctccggtcccagtcagtgtgtcagcgcccgaacccccatg
agcaaactgggcgagggtccgcagattggggattcctttgaagcctgtttggtgccgagg
catcagggttttgtgccacctctgggaaagtcgccactttcgagatacgttcaagtgaag
gcaggaagccagattcagccagtcgggcagccgcttacccagatcggatctgctaaagga
aaccatgacgataaggctccagagaagataaccattaaacaggagaatctcagctatgcc
tatctggaggatgtaaatgacatcataagaagagacatgaaaggccacagtggagactga
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