Xiphophorus hellerii (green swordtail): 116711099
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Entry
116711099 CDS
T07363
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116711099 (ift52)
Cilium and associated proteins [BR:
xhe03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
116711099 (ift52)
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Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
DUF2194
Motif
Other DBs
NCBI-GeneID:
116711099
NCBI-ProteinID:
XP_032406366
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Position
20:complement(32618786..32624954)
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AA seq
435 aa
AA seq
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MMEKEQQSFIIFNASKRELFGINNGYKYMQKRLRAQWKIQSIKEELSAEKLKGVKLWITA
GPREKFTASELEVLKHYLDGGGNMLVMLGEGGEMKYDTNINFLLEEFGIMVNSDAVVRNV
YYKYFHPKEALVSNGVLNREISRAAGKVVTGVIEDEATGNNSQALTFVYPFGATLSVMKP
AVAVLSTGSVCFPLNRPVLAFYHGKESGKLAVLASCHMFCDQYSDREDNSKIMDVVLQWL
MSENIQLNQIDAEDPEIADYTMLPDTGRLSEQLRVCLQEGDENPRDFTSLFDMSLFNLSP
NSLPEVISSFKQLNVKHEPLQLITPQFETPLPQLQPAVFPPALSELPPPMLDLFDLDETF
SSEKVRLAQLTNKCTDDDLEFYVRKCGEILGVTPKLDKEHRDAKHILEHIFFQVVEFKKL
NQEHDFDPETRFTPL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaaagaacaacagagcttcataatctttaatgcttccaaaagagagctgttt
ggcatcaacaatggctacaagtacatgcagaagagactcagagcgcagtggaagatccag
agtataaaggaagaactgtctgcagagaagctgaagggtgtgaagctgtggataactgcc
ggcccaagggagaagttcacagcatcagagctggaggtgctgaagcactacctggacgga
ggaggaaacatgctggtcatgcttggagagggaggagaaatgaaatatgacacaaacatc
aatttcctcctggaggagtttggaataatggtcaacagcgacgctgtagttcggaatgtg
tactacaaatactttcaccccaaggaggccctggtctctaacggcgtgttgaacagagaa
atcagtcgagctgccggcaaagttgtaaccggggtgattgaggatgaagctactggaaac
aactcacaggctctgacatttgtgtatccttttggagccacactgagcgtgatgaaacct
gctgtggctgttctgtccaccggctctgtctgcttcccgctcaacaggcccgtcctggcc
ttctaccacggaaaggagtctggcaaactggccgttttggcttcctgccacatgttctgt
gatcagtactcggacagggaagacaacagtaaaataatggacgtcgtgcttcagtggctc
atgtcagaaaacattcagctgaatcagatcgacgcagaggatcccgagattgcagactac
acaatgctgccagacacgggccgcttgtcggaacagctgcgagtgtgtttacaggaggga
gacgagaacccgcgggacttcacctccctcttcgatatgtctttgttcaatttgtcaccc
aacagtttaccagaagtcataagttcttttaagcagctcaatgtgaaacacgagccactt
cagctcatcactccacagtttgagacgccgctgcctcagcttcagcctgctgtctttccc
cctgcgttaagtgagctgcctcctcccatgctggacctgtttgatcttgatgaaacgttc
tcctctgagaaagtgcgacttgcccaacttaccaataaatgcacagatgacgaccttgag
ttttatgtacgcaaatgtggtgaaattctgggtgtgacaccgaagctggataaagagcac
agggacgcaaagcacatcctggaacacattttcttccaggtggtagaattcaagaaactt
aaccaggaacatgacttcgacccagagacccgattcactccactctaa
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