Xiphophorus hellerii (green swordtail): 116711104
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Entry
116711104 CDS
T07363
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04260
Cardiac muscle contraction
xhe04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116711104
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116711104
04261 Adrenergic signaling in cardiomyocytes
116711104
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116711104
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116711104
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
VWA_CoxE
WAK_assoc
dCache_2
Motif
Other DBs
NCBI-GeneID:
116711104
NCBI-ProteinID:
XP_032406373
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Position
20:17100687..17140163
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AA seq
1145 aa
AA seq
DB search
MEGICRIQVLHTFLLLWIFVGWNVAAVAGSQQGIPLSVVKLWASAFGGEIKSISAKYSGS
QLLQKELWSITAPRPGANSTSEASPPIRATSRLNPKITAACLWEESGGQRGSPRKYGESV
QTAFRKRLQAQNPGLSCPEKYKEPEKSVRVEEIDGVKLVKDLAVKMEEMFQRKAEATRRL
VEAAEEAHHQHEDNPDLQFEYFNAVLINEVGEDEKPVELGGEFLLEPNDHFNNLSVNLSL
SVVQVPTNMYNKDPDIMNGVYWSEALNKVFVENFERDPTLIWQYFGSAKGFFRQYPGVKW
NPDQSISFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDNDF
FNIIAYNQEIHYVEPCLNGTLVRADTTNKDHFREHLDKLFAKGIGLLGEALTEAFTILND
FNQTGRGSVCSQAIMLVTDGATEMYDDVFEKYNWPDRKVRIFPYLIGRESAFADNLKWMA
CANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYADSALRGKSGPALTT
TVAMPVFSTKNETKNQGILLGVAGTDIPLQELMKLIPKHMLGIHGYAFAITNNGYILTHP
DLRPLYQEGQRRRKPYYSSVDLSEVEWEDKDDILRNAMVNRRTGTFSMDVKRTVDRGRRV
LKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSMDAGLRDLEQPDVALADEWTYCN
TEEKHEHRHLTQIQAIKLFMTGRRTHLKCDRELIQEVLFDAVVTAPLKSYWNSLALNKSE
NPDKGVEIAFLGTRTGLSRTNLFVPTAQNFLTAEDEEGVFNADHFPLWYKRAAEQVPGTF
VYSIPFSTASESVVLASTAIQLLDDRKSPIVAAVGIQMKLEYFQRKFWTACRQCTALDGN
CIISCDSEDINCYLIDNNGFILVTEEKSQTGLFFGEVEGAVMSKLLQMGSFKRINLYDYQ
ALCREYAGSSDSARTLSDPFSMVKWLLTELVIFLLEFNLYSWWNVDLSAKAQRPQGKTMM
VPCDTEYPAFVSERTIKETTGNVDCGGCVSSFVIQQIPSSNLFMVVVDNKCDCGTFDPVT
MDPIEIKYNESLKCDRLKLQKDRKKPESCHPFHPEENAMECGSAGRLSSCLAVNLLTLIA
ATVSR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggagggaatctgcaggatccaagtcttgcacacgtttcttcttctctggatcttcgtc
ggctggaacgtagcggcggtggcgggatctcagcaaggaatccctctgtcagttgtaaag
ctttgggcctctgcatttggcggagaaatcaaatcaatttctgcgaagtactctggctcc
cagctattacaaaaggagctgtggtccattacggcgccacgtccgggggccaactccact
tctgaggccagtccccccatcagggccaccagcaggctgaaccctaagatcacagctgcc
tgtctttgggaagaaagtggagggcagcgaggaagtcctcgaaaatacggagaaagtgtc
caaacggcgtttaggaagcgtctccaagcccaaaacccaggactctcctgcccagagaaa
tataaagagcccgaaaagtcggtcagagtggaggagattgacggcgtgaagctggttaaa
gatctggctgtgaagatggaggagatgttccagagaaaagcagaggccaccaggcggctg
gtggaggctgcggaagaagcgcaccatcagcacgaagacaacccagacctgcagttcgag
tacttcaatgctgtgctgatcaacgaagtgggcgaagacgagaaacccgtggagctgggg
ggagagttcctcctggagcccaatgaccatttcaacaacctttcagtcaacctgagcctc
agtgtggtgcaggtgcccaccaacatgtacaataaagatccagatatcatgaatggggtt
tactggtcggaggccttgaacaaggtgtttgtagaaaactttgaaagagatccaacactt
atctggcagtactttggaagtgccaaaggtttcttcagacagtaccccggagtaaagtgg
aatccagaccagtcaatcagcttcgactgcagaaatcggaagtggtacatccaggcagcc
acgtctcctaaggatgtggtgatcctagtggatgttagcgggagcatgaagggtctgagg
ctgacgatcgccagacaaacagtttcctccattttagacacactgggagataatgacttc
ttcaacattattgcttataatcaggagatccactatgtggagccttgtttgaatggtacg
ttggtccgagccgacacaaccaataaagaccatttccgtgagcatctggataagctgttt
gccaaagggattgggctgctgggcgaagctctgaccgaggccttcacaatcctgaatgat
tttaatcagactggacgtggcagcgtgtgcagccaggccatcatgcttgtgacggacgga
gctacggaaatgtatgatgatgtttttgagaagtacaactggccagacagaaaagtgcgc
atattcccctacctgattgggcgagagtctgcatttgcagataacctgaaatggatggct
tgtgccaacaaagggtattttagtcagatctccactctagccgatgtccaggagaatgtg
atgaggtatcttcacgtcatgagccgtccaaaggttatcgatcatgaacacgatacggtg
tggactgaagcgtacgcagacagtgctcttcgcggtaaatctggtccagctctgacgacg
acagtagcaatgccagtgttcagcacaaagaatgaaacgaagaaccagggtattctgctg
ggagtcgctggcacagacatccctctgcaggagctgatgaagctcatcccaaaacatatg
ttagggatccatggatatgcttttgcaatcacaaataatggctacatcctgacgcatccg
gacctcaggcctttgtatcaggagggacagaggaggaggaagccctattacagcagcgtg
gatctctctgaggtggagtgggaagacaaggacgacatcctacgtaacgccatggtaaac
aggaggacggggactttctctatggacgtgaagaggaccgtggaccgagggaggcgtgtt
ctcaagatgcacaacgactattactacaccgacatcaaaggaactccattcagtgtcgga
gttgctctctcaagaggccacggaaagtatttcttcagaggaaatgtatcgatggatgca
gggctccgtgatctggaacagccagatgtcgccctggcagatgaatggacctactgcaac
acggaggagaagcacgagcaccgccacctgacccagattcaagccataaagctcttcatg
actggccgcagaacacacctcaaatgtgacagagagttgatacaggaggtgttgttcgac
gctgttgtcacggctccactgaagagctactggaacagtctggctctcaacaaatcagag
aacccagacaaaggagtggagattgcattcctgggcacacggactggtctgtccagaaca
aacctgtttgtaccgactgctcaaaatttcctgacagcggaggacgaggagggtgtgttt
aatgctgatcacttccccctgtggtacaagagagcggcagagcaggtcccaggcacattt
gtctactccatccccttcagcacagcttctgagagtgtggtgttggccagcacagcaatt
cagctcctcgatgacagaaagtctccgattgttgctgctgtggggatccaaatgaagctc
gagtattttcagagaaagttctggactgcctgcagacagtgcacagctctggatggaaat
tgtatcattagctgtgatagtgaggacattaactgctacctcattgacaacaatggcttc
attcttgttacagaggaaaaatctcagacagggcttttctttggagaggtggagggcgct
gtcatgagcaaacttctccaaatgggctcctttaaaagaatcaacctctatgattaccaa
gcgctttgcagagagtacgccgggagcagcgacagcgcacgcactttatcagatcctttc
tcaatggttaagtggctcctgacagaacttgtcattttcctgctagaattcaacctgtac
agctggtggaacgtcgacctctcagccaaagctcagaggcctcagggtaaaaccatgatg
gtgccttgcgacacagaatacccagccttcgtttccgaacgcaccattaaggagacaaca
ggcaacgttgactgcggtggttgtgttagttcttttgtcatacagcagattcccagcagc
aacctgttcatggttgtagttgacaacaagtgcgactgcggcacctttgatcctgtaaca
atggatcccatcgagatcaagtacaacgagtcactaaaatgtgacagactaaagctgcag
aaggacaggaaaaagcccgagtcatgtcatcctttccaccctgaggaaaatgccatggag
tgcggctcagccggtcgcctctccagctgcctggctgtaaatctgctgaccctgattgca
gcgaccgtcagcaggtga
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integrated database retrieval system
