Xiphophorus hellerii (green swordtail): 116711189
Help
Entry
116711189 CDS
T07363
Symbol
flnb
Name
(RefSeq) filamin-B isoform X1
KO
K27392
filamin-B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116711189 (flnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116711189 (flnb)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116711189 (flnb)
Intermediate filaments
Intermediate filament-binding proteins
116711189 (flnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Big_3_5
GBD_IRG7_N
CFSR
Motif
Other DBs
NCBI-GeneID:
116711189
NCBI-ProteinID:
XP_032406478
LinkDB
All DBs
Position
20:complement(800259..871276)
Genome browser
AA seq
2607 aa
AA seq
DB search
MPATEKDLAEDAPWKKIQQNTFTRWINEHLKCVNKRIVDLQLDLGDGLRLIALLEVLSQK
KMYRKYHPRPNFRQMKLENVSVALEFLERENIKLVSIDSKAIVDGNLKLILGLIWTLILH
YSISMPAWEGEDEEAETKTPKQRLLGWIQHKVPDLPITNFSQDWRNGRALGALVDSCAPG
LCPDWETWDPVKPVENATEAMQLADDWLGIPQVIAPEEIIDPGVDEQSVMTYLSQFPKAK
LKPGAPLKPKLNPKKARAYGPGIEPTGNRVLRPAVFTVDTFSAGQGQVMAYLDHPDGTRE
ELKVEPNEGKKTYSVTYVPQVMGPHKVTVLFAGQQIPKSPFEVNVDKALGDASKVTVKGP
GIEPVGNIANKPTYFDIYTAGAGTGDVTTMIRDPQGRQNSVEVMMEDKGDGMYRCTYRPT
QAGPHAITVTFGGVGVPKSPFAVDIGPACMPGACRATGRGLQPAGMRVKQVGDFKVDTRN
AGSGELKVLIKDPKGNEEPVKQVLSQDGVFCYEYYPRSPGKYTVSITWGAQHIPKSPFDV
VIGPEAGPQQIRAWGPGLKGGIVGKPATFVVESIGTDVGVLGFAIEGPSQAKIECEDKND
GSCDVRYWPTEAGEYAVHVTCDEEDIELSPFMAHIVPDNNTNHPEKVQAYGPGLEPSGCQ
VDQLAEFTVEAEDAGKGPLKITAQDAEGLPVEVKVRSKGEGLYQCCYTPASSLKHTVSVS
WAGVGVPNSPFRVNVGKGSHPNKVKVFGPGVERSGLKANEPTHFTVDCSGAGDGDVSVGI
KWDSSTDGDQEADVDFDIIPNANDTFTVKYVPPAAGRLTVKVMFTDQEVPLSPFLVKVEP
SHDASKVKAKGPGLAPTGVESGKPTHFTVVTKGAGKAPLDVTFSSSVKDFDIIDNYDYSH
TVKYTPVQQGEMTIVVTFGGDPISSSPFRVGVAAPLDLSKVSVDNLDGRVEVNEEQQFMV
DTQGAGGQGQLEVEVLSPSQRAVPCKVEPQPGRAAVSLVRYTPREEGVYAVNVSYDGHPV
PGSPFPVEAQLPPDPSKVKAFGPGLKGGLVGDPAEFTIDTKGAGTGGLGLTVEGPTEAKI
ECSDNGDGTCSVSYLPTEPGDYLVNILFENVHIPGSPFRADIQMPFDPSKVVASGSGLKK
AKVGEISVLNVDCSRAGPGQLSLDAAPESGPGSGMKAKTEVVDNQDGTYTVTYVPLTSGM
YTLMLKYGGKSVPGFPAKVMVDPAVDTSKVKVFGPGVEGQAVFREATTDFTVDARPLTRR
GGEHVKAEVKNPSGALTECVVTDQADGTYSVEYTPFENGVHSVSVLYDDAPVPKNPFRVS
VTEGCDPSRVVATGPGLQQALTDQNNAFSIITRGAGIGGLGITVEGPSESKMSCKDNKDG
SCSVEYVPLTPGLYDVNITYGGEHIPGSPFKVPVKAVVDSSKVKVSGPGVASGVRANIPQ
SFSVDCRKAGEAPLAVAVTGPKGLAEPVEVTDNGDGTHTVSYTPSVEGPYAVSVKYADED
VPRSPFKFRVLPTHDASKVRASGPGLTSGVPASFPVQFNIDARDAGQGQLSVLITDQDGK
PKQPSIHDNDDGTYTVSYVPDRTGRYTIVIKYGGDDIPASPYRVRATATGDASKCTVTGP
GVGPTVAIGEELGLLVNAKAAGKGKVSCVVVQPDGSEVEAQVLENEDGTFDIFYATPAPG
NYAIYVRFGGENIPRSPFKVMATDAVPISQQQMAQQRQAGPPSAGFQPWVMSENYQPISS
SVNGSGFRPFDMIIPFAFRPGEITGEVLMPSGKSAQPLIADNGNGTVIVQYAPTEPGLHE
MHIKYNGTHIPESPLQFYVNHSSSPNVTAFGPGLSYGVANKVATFTVCTEDASEGGLDLA
IEGPSKAEISCVDNKNGTCTVSYLPTLPGDYNILVKYNEDHIEGSPFTARITEDNQRRSQ
VKLGSAADFFLDINETDLSVLTASIRAPSGRDEPCLLKRMANNHIGISFIPREVGEHQVS
ILKNGRHVPNSPITINVVQSEIGDAGRVKAHGDGLVQATTFTNASFVVDTREAGYGGLAL
AIEGPSKVDIQTKDVEDGTCEVSYCPTEPGNYIVSIRFAEEHVPGSPFMVRVTGEGRIRE
SITCRQKAASVASVGSMCDLNLKIPAMDMQDITAEVTSPSGTSRPAELVSMGNDTYCVRF
VPTEMGVHSVGVKYRGVHVPGSPFQFTVGPLGEGGAGKVTAGGPGLEGALAGEPAEFSIW
TREAGAGGLSVAVEGPSRAEISFDDRKDGSCGISYVAQEPGDYEISVKFNEQHIPDSPYL
VPVVAPVNDARRLTVAGLQESGLKANHPASFAVRLNGAQGKLEAKVHSPSGALEECVVTE
LEKDKFAIRFIPRENGVHTIDVKFNGSHIPGSPFQVRVGEPGQSGEPGLVTAYGSGLERG
TTGTQSEFIINNTKAGPGALAVTIEGPSKVKMDCQEIPEGYKVHYTPMAPGTYMISVKYG
GPNHITGSPFKARVTGNRLVNVTNANETSTLTLDPTLRTAGGGFAQSAMPRPGDSDASKV
LSRGPGLSKAFVGQKSNFSVDCSKAGKNMLLVGVYGPQVPCEEVLVKHLGNLQYNVSYVL
KERGGYVLVVKWGDDHIPGSPFNVTVP
NT seq
7824 nt
NT seq
+upstream
nt +downstream
nt
atgccggccacagagaaggacctggcggaggacgctccgtggaagaagatccagcagaac
accttcacccgctggatcaacgagcacctgaagtgcgtcaacaagcggatcgtggacctg
cagctggacctgggggacggcctgcggctcatcgccctgctggaggtcctgagccagaag
aaaatgtaccgaaagtaccacccgaggcccaacttcaggcagatgaagctggagaacgtg
tcggttgcgctggagttcctggagcgggagaacatcaagctggtctccatcgactctaaa
gccattgtagacgggaacctgaagctgatcctgggtttgatctggaccctgatcctgcac
tactccatctccatgccagcctgggagggcgaggacgaagaggcagagacaaagacgcct
aagcagcgtttgctgggctggatccaacacaaagttcctgatctgccgatcaccaacttc
agccaggactggaggaacgggagggcactgggagcactggtggacagctgtgcaccaggc
ctgtgtccagactgggagacctgggatccagtgaaaccagtggagaacgctactgaagcc
atgcagctggctgacgactggctgggaatcccacaggtcatcgctccagaggagatcatc
gaccccggcgtggacgagcagtccgtcatgacctacctgtctcagttccccaaagccaag
ctaaagcccggcgcgccgctcaaacccaaactgaaccccaagaaggcccgcgcatacgga
cccggtatcgaacccacggggaaccgagtgctgcgtcctgctgtgttcaccgtggacacg
ttcagcgcgggtcagggtcaggtcatggcctacctggaccatccagacggcacccgggag
gagctgaaggtggagcccaacgagggcaagaagacgtacagcgtcacctacgttcctcaa
gtcatggggcctcataaggtgacggtgttgtttgcaggccagcagattcctaaaagtccg
tttgaggtgaatgtggacaaggcgctgggagacgcatccaaagtaacggtgaaaggcccg
ggaatcgaacctgtgggcaacatcgccaacaaacccacctactttgacatctacacggca
ggagctggaacgggagacgtgacaaccatgatccgagacccacagggccgccagaacagc
gtggaggtgatgatggaggataagggtgacggcatgtaccgctgcacctaccgccccacg
caggccggaccgcacgccatcaccgtcaccttcggaggagtgggagtccctaagagcccc
ttcgctgtggacatcggaccggcctgcatgccaggcgcctgcagggcgacgggtcggggt
ctgcagccggcagggatgagggtcaagcaggtcggggacttcaaggtggacaccaggaac
gccggcagtggagagctgaaggtgctcatcaaagatcccaaaggcaacgaggagccggtg
aagcaggttctcagtcaggacggcgttttctgctacgagtattacccgagaagtcctgga
aaatacacggtctccatcacctggggggctcagcacatccccaagagtccatttgacgtg
gtgatcggtccggaggcggggcctcagcagatcagggcctggggtcctggattgaagggc
ggcattgtgggtaaacctgcaacctttgtggtggagtccatcggaaccgacgtgggagtt
cttggtttcgccatcgagggtccgtcccaggctaaaatcgagtgcgaggataaaaacgac
gggtcgtgtgacgttcgctactggccgacagaagccggggaatacgccgtccatgtgacc
tgcgacgaagaggacatcgagctcagccccttcatggcccacattgtccccgacaacaac
accaaccacccggagaaggtccaggcttacgggccgggcctggagccgagcggctgccag
gtggaccagctggccgagttcacggtggaggcagaagacgccgggaaagggcctctgaag
atcaccgctcaggatgcagaggggcttcctgtggaggtgaaggtgaggagcaaaggggaa
ggcctgtaccagtgctgctacacgcccgcctcctctctgaagcacaccgtgtccgtcagc
tgggccggagtcggcgtccccaacagccccttcagggtgaacgtggggaaaggaagtcac
cccaacaaggtgaaggtgttcggtcccggagtggagcgaagcgggctgaaggccaacgag
ccgacacacttcaccgtggattgttcaggagccggagacggggacgtcagcgtgggcatc
aagtgggactccagcacagacggtgaccaggaggccgacgtggactttgacatcattccc
aacgccaacgacacgttcaccgtcaaatacgtccctcctgctgcgggcaggctgacggtg
aaagtcatgttcaccgaccaggaagtccctctcagtccgttcctggtgaaagtggagccg
tctcacgatgcttcgaaggttaaagccaaaggtccgggactcgccccgaccggtgtggag
agcggtaagccgacccatttcaccgtggtaaccaaaggagccggtaaagctccgctggac
gttaccttctcctcgtcggtgaaagactttgacatcatcgacaactatgactactctcac
accgtcaagtacacgcctgtgcagcagggggagatgaccatcgtggtgacctttggcggt
gaccccatttccagcagccccttcagggttggcgttgctgctccgctggacctcagcaaa
gtctctgtggacaacctggacggaagggtggaggtgaacgaggagcagcagttcatggtg
gacactcagggcgccggaggccagggtcagctggaggtggaagtgctgagtcccagccag
agagcggtgccttgtaaagtggagcctcagccggggagagcagccgtcagtttggtccgc
tacaccccaagagaggagggcgtctacgccgtcaacgtgtcctacgacgggcaccccgtt
ccgggaagccccttccctgtggaggcccagctgcctccagaccccagcaaggtgaaggcg
ttcggtcccggtctgaagggaggtttggtcggcgacccggccgagttcaccatcgacacg
aagggggccggaaccggcggtctgggcctgacggtggagggtccgaccgaggcgaagatc
gagtgttcggacaacggcgacggcacctgctccgtctcctacctgcccaccgagcccgga
gactacctggtcaacatcctgtttgaaaacgtccacatccccggctcgccgttcagagcc
gacatccagatgccctttgacccctccaaggtggtcgcctcggggtcggggctgaagaag
gcgaaggttggagagatcagcgttctgaatgtggactgctctcgggccgggccgggtcag
ctcagcctggacgcggcgcccgagtctgggccgggctcaggcatgaaagcgaagacggag
gtggtggacaaccaggacgggacgtacacggtgacctacgtccccctgacctccggcatg
tacaccctgatgctgaagtacggaggtaaatccgtgccaggcttcccagccaaggtgatg
gtggatcctgcagtcgacacctccaaggtcaaagtgtttggacccggcgtcgagggccaa
gccgttttcagagaagccaccacggatttcacagtggacgcccgacctttgacccggcga
ggaggagagcacgtgaaggccgaggtcaagaatccgtccggcgctctgacagagtgcgtg
gtcaccgaccaggccgacgggacctacagcgtcgagtacacacccttcgagaacggcgtc
cacagcgtcagcgttctgtacgacgacgcgccggttcccaagaatccgttcagagtctct
gtgacggagggctgcgaccccagcagggtggtggccaccgggccggggctgcagcaggcc
ctgacggaccagaacaacgccttcagcatcatcaccaggggtgcaggaatcggcggcctc
ggcatcaccgtggagggtccgtctgagtccaagatgtcgtgcaaagacaacaaagacggc
agctgcagcgtggagtacgttccgctcacgccgggcctctacgacgtcaacatcacctat
ggtggcgagcacatcccaggaagtccatttaaggtcccggtgaaagccgtggtcgactcc
agtaaggtcaaggtgtcgggtccaggtgtggcgtcgggagtcagagcaaatatcccacaa
tccttcagtgtggactgcaggaaggccggcgaggcgccgctggcggtggccgtcacgggc
ccaaaggggctggcggaaccggtggaggtgacggacaacggcgacgggacgcacaccgtg
tcgtacacgccgtccgtggagggaccgtacgccgtctcggtcaaatacgcagacgaggac
gttccacgcagtccattcaagttcagggttctgccgacccatgatgccagtaaagtgcgt
gccagcggccctgggctgaccagcggcgtccccgccagcttcccggtccagttcaacatc
gacgccagagacgctggccagggccagctgagcgtgctcatcacggaccaggatgggaaa
cccaagcagcccagtatccatgacaacgatgacgggacctacacggtgtcctacgtcccc
gaccgcaccgggcgctacaccatcgtcataaagtacggcggcgacgacatcccggcgtcg
ccctacagagtccgcgccacggcgaccggagacgccagcaaatgcacggtgacgggaccg
ggcgtgggcccgaccgtggccatcggcgaggagctgggcctgttggtgaacgccaaggca
gccggaaagggcaaggtgagctgcgtggtggtccaacccgacggcagcgaggtggaggcc
caggttctggagaacgaagacggcacctttgacatcttctacgccacgccggctccgggg
aactacgccatctacgtccgcttcggaggggaaaacatcccgcgcagtccgttcaaagtc
atggctactgatgcagttcccatcagccaacagcagatggcgcaacagagacaggccggt
ccccctagcgctggcttccagccatgggtgatgtcagagaactaccagccaatcagcagc
agcgtgaacggcagtggcttcagaccgtttgacatgatcatcccgttcgccttcaggccg
ggagaaatcaccggtgaggtgctgatgccttcaggcaagtctgcgcagccgctgatcgca
gacaacggaaatgggacagtgatagtccagtacgccccgactgagccgggcctgcatgag
atgcacatcaagtacaacggcacacacatcccagagtctccgctccagttctacgtgaac
cacagcagcagccccaacgttacggccttcgggcctggactgagctacggcgttgccaac
aaggtggcgaccttcaccgtctgcacagaagacgcctctgaaggcggtctggacctggct
atcgagggtccgtccaaagcggagatcagctgcgtagacaataagaacgggacgtgcacc
gtcagctaccttcccacgctgcctggagattacaacatcctggtcaaatacaacgaagat
cacatcgaaggcagcccgtttaccgccaggatcacggaggacaaccagcgccgctctcag
gttaaactgggctctgcagcagatttcttcctggacatcaacgagactgacctcagcgtg
ttgaccgccagcatcagagcgccgtctggacgggacgagccctgcctgctgaaaaggatg
gccaacaaccacattggcatctccttcattcccagggaggtgggcgaacaccaggtcagc
atcctgaagaacggccggcacgtccccaacagccccatcaccatcaatgtggtccagtcc
gagatcggagacgccggacgagtcaaagcccacggcgacggcctcgttcaggccaccacc
ttcaccaacgccagcttcgtggtcgacacaagggaggcaggttacggcggcctggctctg
gctattgaaggtcccagtaaggtggacatccagacgaaggacgtggaggacgggacctgt
gaggtctcctactgtcccaccgaacctggaaactacatcgtctccatccggtttgcagag
gaacatgttccaggaagtccgttcatggtgagggtgaccggcgaaggtcgcatccgggag
agcatcacctgtcgacagaaggcggcgtcggtcgccagcgtcggcagcatgtgcgacctc
aacctgaagatacccgcgatggacatgcaggacatcaccgctgaagtcacttcgccgtct
ggaaccagccggcccgctgagctggtttccatgggcaacgacacctactgtgtgcggttc
gttcccacggagatgggcgtgcacagcgtcggcgtgaagtacaggggcgtgcacgtacca
ggcagccccttccagttcactgtgggcccgctgggagagggcggcgcgggcaaggtgacg
gccgggggtccgggcctggagggagcgctggccggggagccagccgagttcagcatctgg
acgcgtgaggccggcgccggcggtctgtccgtcgccgtggagggtcccagcagggcggag
atctccttcgacgaccgtaaagacggatcctgcgggatctcctacgtggctcaggagccc
ggcgactacgagatctcggtgaagtttaacgagcagcacattcccgacagcccctacctg
gtcccggtcgtggcgccggtgaacgacgcgcggcgcctcactgttgccggccttcaggag
tccggtctgaaggcgaatcacccagcatcctttgcggtgcgtctgaatggagcgcaggga
aagctggaggccaaggttcacagtccgtctggagcgctggaggagtgcgtcgtcacggag
ctggagaaagataagttcgccatccgcttcatccccagggagaacggcgtccacaccatc
gacgtgaagttcaacggctctcacatcccaggaagtcctttccaggtccgggttggagaa
ccaggacagagcggagagcccggtctggtgacggcgtacggatccggtctggagagaggc
accacaggaacccagtcggagttcatcattaacaacaccaaagcgggacccggagcgcta
gccgtgaccatcgagggtccgtccaaagtgaagatggactgccaggaaatccctgaaggt
tacaaggttcactacactccgatggcaccgggaacctacatgatcagcgtcaaatacgga
gggcccaaccacatcaccggcagccccttcaaggccagagtcacaggtaaccggctggtg
aacgtgaccaacgctaacgagacgtcgaccctgacgctggatccgactctaagaacagcc
ggcggcggcttcgctcagagcgccatgcccagaccgggagactcggacgccagcaaggtg
ctgagccgaggacccggactgagcaaggctttcgtgggccagaagagcaacttctctgtg
gactgcagcaaagctggtaagaacatgctgctggtgggcgtgtacggccctcaggtcccc
tgtgaggaggttctggtcaaacatctggggaacctgcagtacaacgtcagctacgtgctg
aaggaacggggcggctacgtcctggtggtcaagtggggcgacgaccacatcccaggatcc
ccgttcaacgtcaccgtcccataa
DBGET
integrated database retrieval system
