Xiphophorus hellerii (green swordtail): 116711216
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Entry
116711216 CDS
T07363
Name
(RefSeq) liprin-alpha-4-like isoform X1
KO
K26226
liprin-alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116711216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116711216
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116711216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
116711216
NCBI-ProteinID:
XP_032406510
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Position
20:21939661..22003346
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AA seq
1193 aa
AA seq
DB search
MMCEVMPTISEGDSAGPPRGTGSVPNGSDQEANFEQLMVNMLDERDKLLESLRETQETLI
QSQAKLQGALHERDMLQRQINAALPQEFATLTKELNICREQLLEKEEEISELKAERNNTR
LLLEHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERL
RVALERVATLEGQLASTTQELNTARQRKDGDSVERTDGSKPTWKRLPNGSIDAHDDGGRV
SELQELLDRTNKELAQSREHAATLNGRMVELEAELANARRELSRSEELSIKQQREQRERE
DLEERITTLEKRYLAAQRETTHIHDLNDKLENELATKDSLHRQSEEKVRQLQEMLEMAEQ
RLAQTMRKAETLPEVEAELAQRVAALTKAEERHGNVEERLRQLESQLEEKNQELARARQR
EKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNALIQDLENCQKQLEEFHHT
RERLIGEIDKLRNEIDHLKRRSGAFGDGTHPRSHLGSSSDLRFSVVEGQDGHYSTTVIRR
AQKGRLSALRDDPNKVCAMFEQDYPSLRGSVSHLLGSDIEAESDMDDDVSSTLLSPSGQS
DAQTLALMLQEQLDAINEEIRMIQVERESAELRSEEIESRVNSGSMDGLNVTLRPRALPT
SATAQSLASSSSPPTSGHSTPKHHGRNNSHHLGIMTLPSDLRKHRRKVASPVEVDKATIK
CETSPPSSPRSLRLETNFAQFTGSLEDGRGKQKKGIKSSIGRLFGKKEKGRMDQTVGRDG
QSLPALTDFEMSIGDTMTLGKLGTQAERDRRMKKKHELLEDARKRGLPFAQWDGPTVVSW
LELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTS
PSAPLTSRTSSGNVWVTHEEMENLASSTKAENEEGSWAQTLAYGDMNHEWIGNEWLPSLG
LPQYRSYFMECLVDARMLDHLTKKDLRSHLKMVDSFHRASLQYGIMCLKRLNYDRKELDR
RREDSQHDMKDVLVWTNEQVIHWVQSIGLREYSGNLLESGVHGALVALDETFDYSSLALI
LQIPMQNTQARQVLEREFNNLLALGTDRRLEESGDDKSFRRSPSWRKRFRAREGGTGLGM
MAGSMETLPAGFRMPAMSMPPSMNLAAKKQLQPEVPPPAPPRLDPSAVRTYSC
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaagtgatgccgaccatcagcgaaggagactcggctggtcctccgagaggc
accggcagcgtcccgaatggctcggaccaggaggccaacttcgagcagctgatggtcaac
atgttggacgagagagacaagctgctggagtccctcagggagacccaagagaccctcatc
cagtctcaagctaagctccaaggggcgctacacgagagggacatgctccagaggcagatc
aatgccgcgctgcctcaggagtttgccactctgacgaaggagctgaacatatgccgggag
cagctgctggagaaagaagaggaaatatctgaactcaaagctgaaaggaacaacaccagg
ctgctgctggagcacctggagtgtctggtgtctcgtcatgaacgcagcctcaggatgacg
gtggtgaagagacaggcgccgccgccatctggagtctccagtgaggtggaggtcttgaaa
gctctgaagtcactgtttgaacaccacaaggccctggatgaaaaggtacgagagaggctt
cgggtggctctagagagggtggcaaccctggaggggcaactagcgtccaccacccaggag
ttgaacacggcaaggcagaggaaggatggagattcagtggagcggacagacggatccaag
cctacatggaagagactccccaatggttctatagacgcccacgatgacggcggtcgggtg
tctgagcttcaggagctgctggaccggaccaataaggagctcgctcagagtcgcgagcac
gccgccactctaaacggtcgcatggtggagcttgaggcggagctagccaatgcaagacga
gaactgagccgcagtgaagagctgtcaatcaaacaacagagggagcagagagagagagag
gatttggaggaaagaatcacaacattagagaaacgctacctggctgcccagcgagagaca
acccacatccacgacctcaatgacaaactggagaatgaactggccaccaaagattccctg
cacagacagagtgaagagaaggtacgccagctgcaggagatgctggagatggcagagcag
cggttggctcagaccatgaggaaggccgagactctgccagaggttgaagctgagctggca
cagagagtggcggcactaaccaaggctgaggagcgtcatggcaatgtggaggagcgactt
cgacagctggagtcacaactggaggagaaaaaccaagagcttgcaagagctcgtcaaagg
gagaaaatgaacgaggagcacaacaagcgtttgtctgacaccgtggaccgtctgctcacg
gagtccaacgaacggctgcagctccacctgaaggagcgcatggccgccctggaggacaag
aatgcgctcattcaggacctggagaactgccagaaacagcttgaagagtttcaccacacc
agggaacggctgattggagagattgacaagctgagaaacgagattgaccatctgaaacgc
cgcagcggagcgtttggagacggaactcaccctcgctctcacttgggaagctccagcgac
ctccgcttttctgtggtggagggtcaggacggccactacagcacaactgtgatcaggcgg
gcgcagaagggccggctgtcggctctgcgagacgatccgaacaaggtgtgtgccatgttt
gagcaggattacccgtccctgcgcgggagcgtcagccacctgctaggcagcgacatcgag
gcagagtcggacatggacgacgacgtgagctcgacgctgctctcgccaagcggccaatca
gatgctcagactcttgctctcatgctgcaagagcagcttgacgccatcaacgaggagata
aggatgatccaggtagagagagaatcagccgagctgcgctcggaggagatcgagtcccgc
gtgaacagcggcagcatggatggcctgaacgtgaccctccgaccccgagccctgcccacc
tctgccaccgcccagtcgctggcgtcatcctcctctccgcccaccagcggccactccacg
cctaagcatcatggacgcaacaacagccaccatctaggaatcatgactctgccaagtgac
ttgaggaaacacagaagaaaagtggcatctcctgtggaagtggacaaagctactatcaag
tgtgaaacatcacctccctcctcgcctcgaagtttacggctggaaaccaactttgctcag
ttcacaggcagcctggaggatgggcgaggcaagcagaagaaaggtatcaagtcatctatt
ggtcggttgtttgggaagaaggagaagggtcgaatggaccagactgttggcagggatgga
caatctctaccagccttaacagattttgagatgagcattggtgacactatgactttggga
aaactgggcacacaggctgagagggaccgaaggatgaaaaaaaagcatgagcttctggag
gacgctaggaaaagaggccttccattcgcgcagtgggatggtcccacagtcgtttcatgg
ctggagctgtgggtcgggatgccagcctggtatgtagctgcctgtcgtgccaacgtgaag
agtggagccatcatgtccgccctgtctgacacagagatccagagagagattggaatcagc
aaccctctgcacagactcaaattgcgtttggccatccaggaaatggtctctctcaccagc
ccgtctgcgcccctgacctccagaacgtcctccggaaatgtgtgggtgactcatgaagag
atggagaacctggcttcctccaccaaagcggagaatgaggagggcagctgggcacagaca
ttagcatatggggacatgaatcatgagtggataggaaacgaatggctgcccagcctcggc
ctgcctcagtaccgctcctactttatggagtgcctggtggacgcgcgcatgctggaccat
ctgaccaaaaaggacctgagaagccatctgaagatggtggacagctttcacagggctagt
ctgcagtatggaattatgtgcttgaagagactcaattatgacaggaaagagctggaccgt
cggagagaagacagtcaacacgatatgaaagacgttttggtgtggaccaacgaacaggtg
atccactgggtccagtccatcggtctgagggagtacagcggcaacctgctggagagcgga
gttcatggggcactcgtcgctctcgatgaaaccttcgattacagcagcctagcgctcatc
ctgcagatccccatgcaaaacacacaggcaaggcaggttctagagagggagtttaacaac
cttctagccttgggaacagaccgccggctggaggagagtggagatgacaagtcgtttcgg
cgctcaccctcgtggcgcaagaggtttcgggctcgtgagggagggacgggtctggggatg
atggcaggctccatggagacgctgcctgctggcttccgcatgcccgctatgtcgatgccg
ccttccatgaatttggctgccaagaagcaacttcagcctgaagttcctccccctgcgcct
ccaagacttgacccctctgcagtgcggacctattcctgctaa
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