Xiphophorus hellerii (green swordtail): 116711421
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Entry
116711421 CDS
T07363
Symbol
prpf4b
Name
(RefSeq) serine/threonine-protein kinase PRP4 homolog isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xhe01001
]
116711421 (prpf4b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116711421 (prpf4b)
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116711421 (prpf4b)
Protein kinases [BR:
xhe01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
116711421 (prpf4b)
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116711421 (prpf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CSTF_C
Motif
Other DBs
NCBI-GeneID:
116711421
NCBI-ProteinID:
XP_032406624
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All DBs
Position
21:complement(18553582..18564521)
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AA seq
1014 aa
AA seq
DB search
MADVEMDIMSRRMNNGNEHVKQDLETNERSGNEDSGDLSEEEGEEEQAGTNGEKTEEGSK
HHSSSSGKHKRKKHKHRSKHKKHKHAAEEDKDKKRKHRHKHRKHKRKETSSPAEDAPFGT
AGNRKVESSPSSGNPSLDDRAVLEDLEKQRALIKAELDSQLMEGKVQSGMGLILQGYNSG
SEEDGEARFRNGEQRPRGSSGKLISPRGEKSGKSRRDSTDGSKSVSKRRSRSKSADKAAK
EAKPDKGTKSSKEAAGKDRSRARSRSKDRKQSASTDRFKEKRKSNSPPSFRNEQKVSRTD
KRSPPQREERPNQDRTSRRSKSPVRERPSRSDADRDKRPAKSPSKDASLGKENRSPHRRG
AHSPARKRSASPRHRDTHHTSASASDRTSKHSPPRRSPPRRARSRSLDARRREADRQDSP
LRKRSRADAGPLGDRTREKSPRSVSRRRVSRSPLRRRSPSPPRRSRSSPRRRSRSPLRRR
SGERDRYGRLRQYRRSMSRDRGRRRRRSRDEDKFKGSLSEGMKLDQESSDGEMLEDFEGE
EVDEEALIEQRRQQRMAIVQKYKTANEETNMVSEPSSPQSSTRSRSPSPDDILERVAADV
KEYERENLNTFEASIKAKHNLIAQEKDAANPKKPSAPDMFTESDDMFAAHFDSARMRAAG
VGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNVIRARDTARAGQE
VAVKIIRNNELMQKTGLKELEFLRKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMN
LREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLC
DFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGKILLPGSS
NNHMLKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVMSTMNPTK
DLLAELIGGQRLPEDQRKKVMQLKDLLESTLMLDPAKRISINQALQHPFIQEKI
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgttgagatggacatcatgtccagaagaatgaataatggcaacgaacacgta
aagcaagacctggagacaaatgagaggagtggaaatgaagacagtggagacttgtcagaa
gaagaaggggaagaggagcaagctggaactaatggtgagaagactgaggaagggtccaag
catcacagcagcagtagtgggaaacacaagaggaaaaaacacaaacatcgcagcaagcac
aaaaagcacaaacacgcagccgaagaagacaaggacaagaagcgtaagcatcgtcacaaa
catcggaaacataaacgcaaagagacctcctcccccgccgaagatgcccccttcggcacg
gccggcaacaggaaggtggaatcctctccgtcctccggaaacccgagtctggacgaccgg
gccgtgttggaggacctggagaagcagagggccctgatcaaagctgaactggacagccag
ttgatggaggggaaggttcagtctggcatgggcttgatcctgcaggggtataactccgga
tccgaggaggacggagaggcgaggttcagaaacggagaacagcgtccaaggggcagctca
ggtaaactcatatctcccagaggggaaaaaagtgggaaatctagaagggactcaacagat
ggcagtaaatccgtctccaagcgtcgcagccggagcaagtctgcagataaagcggctaag
gaggcaaagccggacaaggggaccaaaagcagcaaggaagctgcagggaaagaccgaagc
cgagcaaggagcaggtcaaaagacagaaaacagtcagccagcacagatcgcttcaaggag
aaaaggaagtccaattcccctcccagcttcaggaacgagcagaaggtgagtcgcactgac
aagcgttcgcctcctcagcgagaagaaagaccaaaccaggacagaacgagcagacgctcc
aaatcaccagtccgagaacggccgagtcgctcggacgctgaccgcgacaaacggccggcg
aaatcgccgtccaaggacgcttcgctggggaaagagaaccgctcccctcacagacgagga
gcccacagcccagcaaggaaacgcagcgcctccccccgccacagagacacccaccacacc
tcggccagcgcctcagaccggacttcaaaacattctccacctagaaggtctccgcccagg
agagcacgcagtcgctcactggacgccaggaggagggaggcagacagacaggactcccct
ttaagaaagcgatctcgggccgatgccggaccactcggagacagaacgcgggagaagagt
cccaggtcggtgtctcgtcgtagagtgagtcgctctcctctgaggaggaggtctccgtcg
ccaccacgacgctctcgctcctcgcctcgcaggcgaagcaggtctccactcaggcgcagg
tctggtgagagagatcgttatggaagactccgccagtatcggcgctcaatgtcccgggat
cgggggagaagaagacggcgcagcagagatgaagacaagttcaaaggaagcctttcagag
ggaatgaaacttgaccaggaatcctcagatggtgaaatgttggaagactttgaaggtgag
gaggtagatgaagaagctcttattgagcagcgccgtcagcagcgcatggccatcgtccag
aaatacaagacagcgaacgaggagaccaacatggtgtcggagcccagcagccctcagagc
agcacacgtagccgatcgccttcacccgacgacatcttggagcgcgtcgccgccgacgtc
aaggagtacgaacgggagaacctcaacacgttcgaggccagcatcaaagccaagcacaac
ctcatcgcccaggagaaagacgcagccaacccaaagaagccttcagcccccgacatgttt
acagagtcagatgacatgtttgctgctcacttcgacagcgccagaatgagagcagcaggt
gtcggaaaggacttcaaggagaaccccaacctcagggacaactggaccgatgctgagggt
tactacagggtaaacattggtgagacattagacaagcgctatgatgtttacggctacaca
ggccagggtgtgtttagcaacgtgatcagagctagggacactgccagagctggccaggag
gtggcggtcaagatcatccgaaacaacgagctcatgcagaaaaccggtttgaaagagttg
gagttcctcaggaagctgaacgacgctgatcccgacgacaagttccactgccttcgcctc
ttccgccacttctaccataagcagcatctttgtcttgttttcgagcctctgagcatgaat
ttgcgagaggtgctgaagaaatacggcaaagacgtcgggctccacatcaaagccgttcga
tcgtacagccagcagctcttcttggccctcaagctgctcaaacgatgcaacatcctccat
gctgacatcaagccagacaacatcctggtgaacgagtccaaaaccatcctgaagctctgt
gactttggctctgcatcacatgttgctgacaatgacatcacaccatatctggtcagccgg
ttttacagagctccagaaattatcatagggaagccttacgactacggcatcgacatgtgg
tccgttggctgcactttatacgagctgtacaccggcaaaatcctgctccctggatcttcc
aacaatcacatgctgaagctggcgatggacctcaagggcaagatgcccaacaagatgata
cgtaaaggcttgttcaaagaccagcacttcgatcagaacttgaacttcctgtacattgaa
gtagacaaagtgactgaaagggagaaagtgactgtaatgagcactatgaaccccaccaaa
gacctgctggcggagctgataggcggtcagcgacttcctgaggaccagaggaagaaggtc
atgcagctgaaggacctgctggagagcacactgatgctggacccggctaagcgcatcagc
ataaaccaggctcttcagcacccttttatccaggagaaaatctaa
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