KEGG   Xiphophorus hellerii (green swordtail): 116711642
Entry
116711642         CDS       T07363                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116711642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xhe03019]
    116711642
   03016 Transfer RNA biogenesis [BR:xhe03016]
    116711642
   03012 Translation factors [BR:xhe03012]
    116711642
   04131 Membrane trafficking [BR:xhe04131]
    116711642
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xhe04147]
    116711642
Messenger RNA biogenesis [BR:xhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     116711642
Transfer RNA biogenesis [BR:xhe03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    116711642
Translation factors [BR:xhe03012]
 Eukaryotic type
  Elongation factors
   116711642
Membrane trafficking [BR:xhe04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    116711642
Exosome [BR:xhe04147]
 Exosomal proteins
  Proteins found in most exosomes
   116711642
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Ras G-alpha
Other DBs
NCBI-GeneID: 116711642
NCBI-ProteinID: XP_032406930
LinkDB
Position
21:17888398..17894290
AA seq 455 aa
MEREKAHVNVVIIGHVDSGKSTTTGHLVYKCGGVDQRKLEKFEKAAAQMGKSSFKFAWLL
DKLKAERERGITIDISFLKFNTQKYSMTIIDAPGHRDFIKNMITGTSQADVALLVVSAAK
GEYEAGVSRSGQTREHALLAYTLGVKQIIVCVNKMDLTEPPYSQKRYDEVVRGVKVFLKK
IGYDTNAVPFVPISGWIGENMITPTQKMPWYQGWRVLLRDGAESGKTLLEVLDAIKPPVR
TINKPLRLPLQDVYKIGGVGTVPVGKIETGVLKPGMTLMFSPAKLTAEVKSIEMHHQGLD
TALPGHNVGFNIKSVSVKNLQRGDVAGNAQHDPPSDVHSFEAQVIILNHPGKIKMGYSPV
LDCHTAHVTCRFAELKEKLDRRTGKKLEDNPQLLQSGDAATVKLVPIKPMCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVEKGSKASQKTQPSK
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggagagagaaaaggctcacgttaacgtcgtcatcatcggccatgtcgacagcggcaaa
tccaccaccactggacacctggtctacaagtgtggcggtgtggaccagcggaaactggag
aagtttgagaaggctgcagcccagatggggaagagttccttcaagttcgcctggctgctg
gacaagctgaaggctgagcgggagcggggaatcaccatcgacatctctttcctgaagttt
aacacccagaaatacagcatgaccatcattgacgcacctggacacagagacttcatcaaa
aacatgatcactggcacatcccaggctgatgttgccctgctggtcgtctctgcagccaaa
ggggaatatgaagcgggtgtttccaggagtggccagaccagagagcatgccttactggct
tacactctgggcgtcaagcagatcatagtgtgtgtgaacaaaatggacctcacggagccg
ccgtacagccagaaacgctacgacgaagtggtccgaggagtgaaggtcttcctcaagaag
atcggctacgacaccaacgccgtgccgtttgttccgatctccggctggataggcgaaaac
atgatcacgccaacacaaaagatgccgtggtaccaaggctggagggtcctactgagggat
ggtgctgaaagcggaaagactcttctagaagttctggacgcgatcaaacctccagtgcga
acaatcaacaaaccactacggctccctctgcaagacgtctacaaaattggaggtgttggg
acagttccagtgggaaagattgaaactggagtcctcaaaccaggcatgaccttgatgttc
tcccctgccaagctcactgcagaagtgaaatccatagaaatgcaccaccagggtctggat
acggctctgccagggcacaatgttggcttcaacatcaagagcgtctctgtaaagaacctg
cagcgtggagacgtggccggcaacgcccagcacgaccctccttctgatgtccacagcttc
gaagctcaggtaatcatcctgaatcatccagggaagataaaaatggggtactctcctgtc
ctggactgccacaccgctcatgtcacctgccgatttgccgagctgaaggagaaactcgac
cgccgaacagggaagaaactggaggacaacccgcagctgctgcagtctggagatgcagct
acagtcaaactggttcccattaagcccatgtgtgtggagagcttcttcacataccctcct
ttaggtcgctttgcagcaagagacttgaagcagacagttgcagtgggagtgataaagtct
gtggagaaggggtcaaaagcttcccagaaaacacaaccatctaaatga

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