Xiphophorus hellerii (green swordtail): 116711642
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Entry
116711642 CDS
T07363
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116711642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116711642
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116711642
03012 Translation factors [BR:
xhe03012
]
116711642
04131 Membrane trafficking [BR:
xhe04131
]
116711642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116711642
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116711642
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116711642
Translation factors [BR:
xhe03012
]
Eukaryotic type
Elongation factors
116711642
Membrane trafficking [BR:
xhe04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
116711642
Exosome [BR:
xhe04147
]
Exosomal proteins
Proteins found in most exosomes
116711642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Ras
G-alpha
Motif
Other DBs
NCBI-GeneID:
116711642
NCBI-ProteinID:
XP_032406930
LinkDB
All DBs
Position
21:17888398..17894290
Genome browser
AA seq
455 aa
AA seq
DB search
MEREKAHVNVVIIGHVDSGKSTTTGHLVYKCGGVDQRKLEKFEKAAAQMGKSSFKFAWLL
DKLKAERERGITIDISFLKFNTQKYSMTIIDAPGHRDFIKNMITGTSQADVALLVVSAAK
GEYEAGVSRSGQTREHALLAYTLGVKQIIVCVNKMDLTEPPYSQKRYDEVVRGVKVFLKK
IGYDTNAVPFVPISGWIGENMITPTQKMPWYQGWRVLLRDGAESGKTLLEVLDAIKPPVR
TINKPLRLPLQDVYKIGGVGTVPVGKIETGVLKPGMTLMFSPAKLTAEVKSIEMHHQGLD
TALPGHNVGFNIKSVSVKNLQRGDVAGNAQHDPPSDVHSFEAQVIILNHPGKIKMGYSPV
LDCHTAHVTCRFAELKEKLDRRTGKKLEDNPQLLQSGDAATVKLVPIKPMCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVEKGSKASQKTQPSK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggagagagaaaaggctcacgttaacgtcgtcatcatcggccatgtcgacagcggcaaa
tccaccaccactggacacctggtctacaagtgtggcggtgtggaccagcggaaactggag
aagtttgagaaggctgcagcccagatggggaagagttccttcaagttcgcctggctgctg
gacaagctgaaggctgagcgggagcggggaatcaccatcgacatctctttcctgaagttt
aacacccagaaatacagcatgaccatcattgacgcacctggacacagagacttcatcaaa
aacatgatcactggcacatcccaggctgatgttgccctgctggtcgtctctgcagccaaa
ggggaatatgaagcgggtgtttccaggagtggccagaccagagagcatgccttactggct
tacactctgggcgtcaagcagatcatagtgtgtgtgaacaaaatggacctcacggagccg
ccgtacagccagaaacgctacgacgaagtggtccgaggagtgaaggtcttcctcaagaag
atcggctacgacaccaacgccgtgccgtttgttccgatctccggctggataggcgaaaac
atgatcacgccaacacaaaagatgccgtggtaccaaggctggagggtcctactgagggat
ggtgctgaaagcggaaagactcttctagaagttctggacgcgatcaaacctccagtgcga
acaatcaacaaaccactacggctccctctgcaagacgtctacaaaattggaggtgttggg
acagttccagtgggaaagattgaaactggagtcctcaaaccaggcatgaccttgatgttc
tcccctgccaagctcactgcagaagtgaaatccatagaaatgcaccaccagggtctggat
acggctctgccagggcacaatgttggcttcaacatcaagagcgtctctgtaaagaacctg
cagcgtggagacgtggccggcaacgcccagcacgaccctccttctgatgtccacagcttc
gaagctcaggtaatcatcctgaatcatccagggaagataaaaatggggtactctcctgtc
ctggactgccacaccgctcatgtcacctgccgatttgccgagctgaaggagaaactcgac
cgccgaacagggaagaaactggaggacaacccgcagctgctgcagtctggagatgcagct
acagtcaaactggttcccattaagcccatgtgtgtggagagcttcttcacataccctcct
ttaggtcgctttgcagcaagagacttgaagcagacagttgcagtgggagtgataaagtct
gtggagaaggggtcaaaagcttcccagaaaacacaaccatctaaatga
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integrated database retrieval system