Xiphophorus hellerii (green swordtail): 116711821
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Entry
116711821 CDS
T07363
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116711821 (zeb1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
116711821 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
Homeodomain
zf-H2C2_5
zf-C2H2_16
HVO_2753_ZBP
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
116711821
NCBI-ProteinID:
XP_032407253
LinkDB
All DBs
Position
21:complement(3562319..3623170)
Genome browser
AA seq
1085 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVTNYNNVLEAGSDSDDEDKLHIVEEEGSLADGADCDSTLPD
EEHPSVPSWDPVKEDCASDGEDDVSTDALVEEMLQQGDTAIIYPEAPDDDLQRQGTPDAS
VHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFSCPECSYSFAYRAQL
ERHMSVHKGGRDQRHITQSGGNRKFKCPECGKAFKYKHHLKEHLRIHSGEKPYECSHCKK
RFSHSGSYSSHISSKKCISVISVNSRQRLGGSRNQAQGSPPGLPTSPSVHCGQIREKLEH
SKPLQEQLPLNQIKTEPVDYEYKPAVITPPAMAAMNGGVFSGGAAAPLQGTVQAVVLPTV
GLVSPISINLADLQNALKVAVDGNVIRQVLENNAKGQVNSGLTTQTLHPPQQQLISAISL
PIVGQDGNAKLIINYSLDPNQGQLTPHNLKKEPVSPAQSAVDSIKSQKLPEDLSVRGNRD
QAQQKEEKTTTTCLLCENCPGGLEALHALKHCKKEDLRLNGAGLDKSEAVAALLSDGGLC
NHPKNLLSLLKAYFALNAEPSKDELIKISDSVSLPIHVVKKWFSKMQQGQISLGAPTPPS
EEEDSYESHSVVSLVPGKDTATISRSVSQDSPTEATPAEVNGTHSSPASPSPLNLTAGGP
TQADTPESTEGPLDLSLPKPAREEAESMVPAARVYPSASSHQTTEEEPLNLTCTKKDTSP
LSAMGGSPLALYANQPSAKPLDIVTTMQCLRALTNSSSKQTILIPQLAYTYTTTANSPAG
TETHETIHLNGIKEERLDLGSEGFSAVDEQNDSDSGPARKKMKKTDSGMYACDLCDKIFQ
KSSSLLRHKYEHTGKRPHECSICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGS
YSQHMNHRYSYCKKETQSQAGGRESPAEEDGEVPTEQQRQDTAPSLLDSDERGSSTREDE
ESEEEEEGVVDMNDIQVVQIEDEEEEDKEERKEEQMETEREDGTLEMEEKEEVDTRQEEM
RRSVQEEESDANKDEVTDKEGGAAEEEDGQDGEDGEVQEESRGETNQSGVSQDEEETPEE
KADTD
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaccaacgtg
accaactacaacaatgtgctggaggcaggctcagactcagacgatgaggacaagctgcac
atcgtggaggaggaaggcagcctcgcagacggggcagactgcgacagcaccctgccggat
gaagagcacccgagcgtgccgagttgggacccagtgaaggaggactgcgcttcagatggc
gaggatgacgtgagcacggacgccctggtggaagagatgctccagcaaggagacacggcc
atcatctacccagaggccccagacgatgacctccagcgccagggcacccccgacgccagc
gtccatgacgagaacggaacccctgattcgttctcccagctgctcacatgcccgtactgc
gcgcggggctacaagcgctacagctccctgaaggagcacatcaagtaccggcatgagaag
acagaggagagcttcagctgcccagagtgcagctacagcttcgcataccgcgctcagttg
gagcgtcatatgagcgttcataagggaggacgagatcagaggcacatcacgcagtccgga
ggcaaccggaaattcaagtgccccgaatgcggcaaagcattcaagtacaagcaccatctg
aaggagcacctccggattcacagtggagagaaaccctatgagtgctcccactgcaagaag
cgcttctcccactcaggctcctacagttcccacatcagcagtaagaagtgcatcagcgtc
atctcagtgaacagcagacagcgcctggggggcagcagaaaccaggcccagggttcacca
ccggggctgcccacatccccttcagtccactgcggacagatcagggagaaactggagcac
agcaagcccctccaggagcagctgcctctcaaccagatcaagacggagcctgtggattac
gagtacaagccggcggtaataacgcctccggccatggccgctatgaatggcggagttttc
agcggaggtgctgctgcccctctgcagggtactgtacaggcggtggttctgcccacagtg
gggttggtgtcccccatcagcatcaacctggcagacctacagaatgccctcaaggtggca
gtggacggtaacgttatacggcaggtgctggaaaacaacgccaaaggccaggtgaactca
ggcctcaccactcaaaccctgcacccccctcagcagcagctcatctcagccatcagtctg
ccaatcgtaggccaggatgggaatgcgaaacttattataaattacagtctggaccccaac
cagggccagctcacaccccataacctaaagaaagagccagtgtctccggctcagagtgcc
gttgactctatcaagtcccagaaactccccgaggatctttcagtcagaggcaacagggac
caggctcagcaaaaagaggaaaagaccactacaacctgtctactgtgtgagaactgtcca
gggggcctggaagcactccatgctctcaagcactgcaagaaagaggatctcagattgaac
ggagcaggtttagataaatctgaggcagttgctgccttgctgtcagatggaggactctgc
aaccaccccaagaacctcctgtcccttctcaaggcctatttcgccttaaatgcagagccc
tccaaggatgagctgatcaagatctctgactcagtcagtctgccgatccatgtggtaaag
aagtggtttagcaaaatgcagcagggtcagatatccctgggcgccccaacacccccatca
gaagaggaggactcctatgaatctcacagtgtggtatcactggtcccagggaaggacaca
gccactataagcagatctgtgagtcaggatagccccacagaggctacgccagcagaggtc
aacggcactcacagctcaccggcctcgccctcgccacttaatcttacagctggcggtccc
acccaagccgacacccctgagagcactgagggacccctggacctgtcgctgccaaagcca
gccagagaagaagcagagagcatggtgcctgcagcccgagtttacccctctgcttcctcc
caccagaccactgaggaggaacctctgaacttaacttgcacaaagaaggacacgtcacca
ctctcagccatggggggaagccccctcgcactgtacgccaaccagccaagtgccaaaccc
ctcgatattgtaaccacaatgcaatgcctccgagcactgaccaacagcagcagcaaacag
actattctgatcccccagctggcttacacatacaccactacagctaacagccctgcaggg
acagagacgcacgaaaccatccacctcaatggaatcaaggaggagaggctggatctgggc
tcagagggattctcggccgtggacgagcagaacgactccgactcgggcccagcgaggaag
aagatgaagaagacggacagcggcatgtacgcctgcgacctgtgtgacaagatcttccaa
aagagcagttcgctactgagacacaaatacgaacacacagggaagcgacctcacgagtgc
agcatctgcagcaaggccttcaaacacaaacaccacctgatcgaacacatgcgcctccac
tcgggggagaagccgtaccagtgcgacaagtgcggcaagcgcttctcccactcgggctcc
tactcccagcacatgaaccaccgctactcctactgcaagaaggagacgcagagccaggct
ggaggacgggagagccccgcggaggaggacggcgaggtccccacagagcagcagaggcag
gacacggcgccctccctactggactcagacgagcgagggagcagcaccagggaggacgaa
gagagcgaggaggaggaggagggagtggtggacatgaatgacatccaggtggttcagata
gaggatgaggaggaagaggacaaagaggagagaaaggaggagcagatggagaccgagaga
gaggacggaacattagagatggaggagaaagaggaagtcgacacaaggcaggaggagatg
cggcggagcgttcaggaggaggaaagcgacgccaacaaagatgaggtgacggataaggag
ggaggtgcagccgaggaggaggacgggcaggacggggaggatggggaggtccaggaggag
agcagaggcgaaacgaaccagagcggggtttctcaggacgaggaggagacgccggaggag
aaagcagacacagactga
DBGET
integrated database retrieval system
